RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 ABCA3Q99758 1704 aa16.97■□□□□ 0.31
ERGIC3-211ENST00000461043 CDCA8Q53HL2 280 aa16.97■□□□□ 0.31
ERGIC3-211ENST00000461043 A0A1W2PP64 1363 aa16.96■□□□□ 0.31
ERGIC3-211ENST00000461043 MYOM1P52179 1685 aa16.96■□□□□ 0.31
ERGIC3-211ENST00000461043 KTN1Q86UP2 1357 aaKnown RBP16.95■□□□□ 0.3
ERGIC3-211ENST00000461043 NUTM2BA6NNL0 878 aaPredicted RBP16.95■□□□□ 0.3
ERGIC3-211ENST00000461043 NUTM2EB1AL46 878 aaPredicted RBP16.95■□□□□ 0.3
ERGIC3-211ENST00000461043 PAK3O75914 559 aaPredicted RBP16.95■□□□□ 0.3
ERGIC3-211ENST00000461043 NUTM2AQ8IVF1 878 aaPredicted RBP16.95■□□□□ 0.3
ERGIC3-211ENST00000461043 TMC1Q8TDI8 760 aa16.95■□□□□ 0.3
ERGIC3-211ENST00000461043 PIK3C2AO00443 1686 aa16.94■□□□□ 0.3
ERGIC3-211ENST00000461043 TTC21BQ7Z4L5 1316 aa16.94■□□□□ 0.3
ERGIC3-211ENST00000461043 ANKRD36BQ8N2N9 1353 aa16.93■□□□□ 0.3
ERGIC3-211ENST00000461043 RGS17Q9UGC6 210 aaPredicted RBP16.93■□□□□ 0.3
ERGIC3-211ENST00000461043 USP19O94966 1318 aa16.93■□□□□ 0.3
ERGIC3-211ENST00000461043 C11orf95C9JLR9 678 aaPredicted RBP16.92■□□□□ 0.3
ERGIC3-211ENST00000461043 LMOD2Q6P5Q4 547 aa16.92■□□□□ 0.3
ERGIC3-211ENST00000461043 CABLES1Q8TDN4 633 aa16.92■□□□□ 0.3
ERGIC3-211ENST00000461043 TERF2IPQ9NYB0 399 aa16.92■□□□□ 0.3
ERGIC3-211ENST00000461043 EDC4Q6P2E9 1401 aaKnown RBP16.92■□□□□ 0.3
ERGIC3-211ENST00000461043 TTC21AQ8NDW8 1320 aa16.92■□□□□ 0.3
ERGIC3-211ENST00000461043 PHRF1Q9P1Y6 1649 aaKnown RBP16.92■□□□□ 0.3
ERGIC3-211ENST00000461043 MARF1Q9Y4F3 1742 aaKnown RBP16.91■□□□□ 0.3
ERGIC3-211ENST00000461043 HDGFL2Q7Z4V5 671 aaPredicted RBP16.91■□□□□ 0.3
ERGIC3-211ENST00000461043 ADAMTS2O95450 1211 aa16.9■□□□□ 0.3
ERGIC3-211ENST00000461043 MEX3CQ5U5Q3 659 aaKnown RBP16.9■□□□□ 0.3
ERGIC3-211ENST00000461043 ABTB2Q8N961 1025 aa16.9■□□□□ 0.3
ERGIC3-211ENST00000461043 USP54Q70EL1 1684 aa16.9■□□□□ 0.3
ERGIC3-211ENST00000461043 SLIT3O75094 1523 aa16.9■□□□□ 0.3
ERGIC3-211ENST00000461043 USP31Q70CQ4 1352 aa16.89■□□□□ 0.29
ERGIC3-211ENST00000461043 NUTM2GQ5VZR2 741 aa16.88■□□□□ 0.29
ERGIC3-211ENST00000461043 FNBP4Q8N3X1 1017 aaPredicted RBP16.88■□□□□ 0.29
ERGIC3-211ENST00000461043 C8orf37Q96NL8 207 aa16.87■□□□□ 0.29
ERGIC3-211ENST00000461043 PHF23Q9BUL5 403 aaPredicted RBP16.87■□□□□ 0.29
ERGIC3-211ENST00000461043 SLIT2O94813 1529 aa16.86■□□□□ 0.29
ERGIC3-211ENST00000461043 NLRP13Q86W25 1043 aa16.86■□□□□ 0.29
ERGIC3-211ENST00000461043 AFF2P51816 1311 aa16.86■□□□□ 0.29
ERGIC3-211ENST00000461043 KIF7Q2M1P5 1343 aa16.86■□□□□ 0.29
ERGIC3-211ENST00000461043 NLRP6P59044 892 aa16.85■□□□□ 0.29
ERGIC3-211ENST00000461043 CARD14Q9BXL6 1004 aa16.85■□□□□ 0.29
ERGIC3-211ENST00000461043 CPDO75976 1380 aa16.85■□□□□ 0.29
ERGIC3-211ENST00000461043 OVOS2A0A0J9YW53 1432 aa16.85■□□□□ 0.29
ERGIC3-211ENST00000461043 OVOS2Q6IE36 1432 aa16.85■□□□□ 0.29
ERGIC3-211ENST00000461043 BCL9LQ86UU0 1499 aa16.85■□□□□ 0.29
ERGIC3-211ENST00000461043 PLEKHG5O94827 1062 aa16.84■□□□□ 0.29
ERGIC3-211ENST00000461043 NME9Q86XW9 330 aa16.84■□□□□ 0.29
ERGIC3-211ENST00000461043 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.84■□□□□ 0.29
ERGIC3-211ENST00000461043 NGLY1Q96IV0 654 aa16.84■□□□□ 0.29
ERGIC3-211ENST00000461043 NFAT5O94916 1531 aa16.83■□□□□ 0.28
ERGIC3-211ENST00000461043 GCP02774 474 aa16.83■□□□□ 0.28
ERGIC3-211ENST00000461043 ZEB1P37275 1124 aaPredicted RBP16.83■□□□□ 0.28
ERGIC3-211ENST00000461043 HAP1P54257 671 aaPredicted RBP16.83■□□□□ 0.28
ERGIC3-211ENST00000461043 POTEAQ6S8J7 498 aa16.83■□□□□ 0.28
ERGIC3-211ENST00000461043 KIAA0232Q92628 1395 aa16.83■□□□□ 0.28
ERGIC3-211ENST00000461043 ZRANB1Q9UGI0 708 aa16.83■□□□□ 0.28
ERGIC3-211ENST00000461043 COL14A1Q05707 1796 aaKnown RBP16.82■□□□□ 0.28
ERGIC3-211ENST00000461043 PLCH1Q4KWH8 1693 aa16.82■□□□□ 0.28
ERGIC3-211ENST00000461043 CCDC7Q96M83 1385 aa16.82■□□□□ 0.28
ERGIC3-211ENST00000461043 FAM83GA6ND36 823 aa16.82■□□□□ 0.28
ERGIC3-211ENST00000461043 ZNF772Q68DY9 489 aaPredicted RBP16.82■□□□□ 0.28
ERGIC3-211ENST00000461043 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.82■□□□□ 0.28
ERGIC3-211ENST00000461043 NWD2Q9ULI1 1742 aa16.82■□□□□ 0.28
ERGIC3-211ENST00000461043 NSD3Q9BZ95 1437 aa16.81■□□□□ 0.28
ERGIC3-211ENST00000461043 WASHC2AQ641Q2 1341 aa16.81■□□□□ 0.28
ERGIC3-211ENST00000461043 ATRNO75882 1429 aa16.8■□□□□ 0.28
ERGIC3-211ENST00000461043 POLR3GLQ9BT43 218 aa16.8■□□□□ 0.28
ERGIC3-211ENST00000461043 NRAPQ86VF7 1730 aa16.79■□□□□ 0.28
ERGIC3-211ENST00000461043 LMO7Q8WWI1 1683 aa16.79■□□□□ 0.28
ERGIC3-211ENST00000461043 FYB1O15117 783 aa16.79■□□□□ 0.28
ERGIC3-211ENST00000461043 USP21Q9UK80 565 aa16.79■□□□□ 0.28
ERGIC3-211ENST00000461043 ZC3H6P61129 1189 aaKnown RBP16.78■□□□□ 0.28
ERGIC3-211ENST00000461043 UNC5CLQ8IV45 518 aa16.78■□□□□ 0.28
ERGIC3-211ENST00000461043 KCNH5Q8NCM2 988 aa16.78■□□□□ 0.28
ERGIC3-211ENST00000461043 PRDM11Q9NQV5 511 aa16.78■□□□□ 0.28
ERGIC3-211ENST00000461043 PANK3Q9H999 370 aa16.77■□□□□ 0.28
ERGIC3-211ENST00000461043 AATKQ6ZMQ8 1374 aa16.77■□□□□ 0.27
ERGIC3-211ENST00000461043 KIF20BQ96Q89 1820 aa16.76■□□□□ 0.27
ERGIC3-211ENST00000461043 ILDR2Q71H61 639 aa16.76■□□□□ 0.27
ERGIC3-211ENST00000461043 ARHGEF25Q86VW2 580 aa16.76■□□□□ 0.27
ERGIC3-211ENST00000461043 COL18A1P39060 1754 aa16.76■□□□□ 0.27
ERGIC3-211ENST00000461043 ABCC6O95255 1503 aa16.75■□□□□ 0.27
ERGIC3-211ENST00000461043 CAMTA1Q9Y6Y1 1673 aa16.75■□□□□ 0.27
ERGIC3-211ENST00000461043 CHRNA2Q15822 529 aa16.75■□□□□ 0.27
ERGIC3-211ENST00000461043 QTRT2Q9H974 415 aaKnown RBP16.75■□□□□ 0.27
ERGIC3-211ENST00000461043 BTG4Q9NY30 223 aa16.75■□□□□ 0.27
ERGIC3-211ENST00000461043 TRPC5Q9UL62 973 aaPredicted RBP16.75■□□□□ 0.27
ERGIC3-211ENST00000461043 COG3Q96JB2 828 aa16.74■□□□□ 0.27
ERGIC3-211ENST00000461043 GGNBP2Q9H3C7 697 aa16.74■□□□□ 0.27
ERGIC3-211ENST00000461043 CGNL1Q0VF96 1302 aa16.73■□□□□ 0.27
ERGIC3-211ENST00000461043 VPS72Q15906 364 aa16.73■□□□□ 0.27
ERGIC3-211ENST00000461043 CDK12Q9NYV4 1490 aaPredicted RBP16.73■□□□□ 0.27
ERGIC3-211ENST00000461043 COL5A2P05997 1499 aaPredicted RBP16.72■□□□□ 0.27
ERGIC3-211ENST00000461043 GLI3P10071 1580 aa16.72■□□□□ 0.27
ERGIC3-211ENST00000461043 SOX12O15370 315 aa16.71■□□□□ 0.27
ERGIC3-211ENST00000461043 PER1O15534 1290 aaPredicted RBP16.71■□□□□ 0.27
ERGIC3-211ENST00000461043 RBM6P78332 1123 aaKnown RBP16.71■□□□□ 0.27
ERGIC3-211ENST00000461043 NSD2O96028 1365 aa16.7■□□□□ 0.26
ERGIC3-211ENST00000461043 RXRBP28702 533 aa16.7■□□□□ 0.26
ERGIC3-211ENST00000461043 GJD4Q96KN9 370 aaPredicted RBP16.7■□□□□ 0.26
ERGIC3-211ENST00000461043 AXIN2Q9Y2T1 843 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms