RNA–Protein interactions for RNA: ENST00000461015.1

NICN1-205, Transcript of nicolin 1, humanhuman

TSL 4

Gene NICN1, Length 411 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1-205ENST00000461015 AATKQ6ZMQ8 1374 aa10.7□□□□□ -0.7
NICN1-205ENST00000461015 U2AF1L5P0DN76 240 aaPredicted RBP10.7□□□□□ -0.7
NICN1-205ENST00000461015 U2AF1Q01081 240 aaKnown RBP eCLIP10.7□□□□□ -0.7
NICN1-205ENST00000461015 NME9Q86XW9 330 aa10.7□□□□□ -0.7
NICN1-205ENST00000461015 PPM1GO15355 546 aaPredicted RBP10.69□□□□□ -0.7
NICN1-205ENST00000461015 FCHSD2O94868 740 aa10.69□□□□□ -0.7
NICN1-205ENST00000461015 POLKQ9UBT6 870 aa10.69□□□□□ -0.7
NICN1-205ENST00000461015 ADGRL3Q9HAR2 1447 aa10.68□□□□□ -0.7
NICN1-205ENST00000461015 U2SURPO15042 1029 aaKnown RBP10.68□□□□□ -0.7
NICN1-205ENST00000461015 PAK3O75914 559 aaPredicted RBP10.68□□□□□ -0.7
NICN1-205ENST00000461015 NLRP6P59044 892 aa10.68□□□□□ -0.7
NICN1-205ENST00000461015 ABTB2Q8N961 1025 aa10.68□□□□□ -0.7
NICN1-205ENST00000461015 CHD2O14647 1828 aaKnown RBP10.68□□□□□ -0.7
NICN1-205ENST00000461015 USP6P35125 1406 aa10.67□□□□□ -0.7
NICN1-205ENST00000461015 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.67□□□□□ -0.7
NICN1-205ENST00000461015 GOLGA2Q08379 1002 aa10.67□□□□□ -0.7
NICN1-205ENST00000461015 KCNH5Q8NCM2 988 aa10.67□□□□□ -0.7
NICN1-205ENST00000461015 NKTRP30414 1462 aaKnown RBP10.67□□□□□ -0.7
NICN1-205ENST00000461015 XRN1Q8IZH2 1706 aaKnown RBP10.67□□□□□ -0.7
NICN1-205ENST00000461015 PNPLA6Q8IY17 1366 aa10.66□□□□□ -0.7
NICN1-205ENST00000461015 CDC42BPGQ6DT37 1551 aa10.66□□□□□ -0.7
NICN1-205ENST00000461015 APAF1O14727 1248 aa10.66□□□□□ -0.7
NICN1-205ENST00000461015 ERICH6BQ5W0A0 696 aa10.66□□□□□ -0.7
NICN1-205ENST00000461015 SALL2Q9Y467 1007 aaPredicted RBP10.66□□□□□ -0.7
NICN1-205ENST00000461015 MSH6P52701 1360 aa10.65□□□□□ -0.7
NICN1-205ENST00000461015 USP31Q70CQ4 1352 aa10.65□□□□□ -0.7
NICN1-205ENST00000461015 MAPK8IP3Q9UPT6 1336 aa10.65□□□□□ -0.7
NICN1-205ENST00000461015 CCDC27Q2M243 656 aa10.65□□□□□ -0.7
NICN1-205ENST00000461015 RBM33Q96EV2 1170 aaKnown RBP10.65□□□□□ -0.7
NICN1-205ENST00000461015 BLMP54132 1417 aaPredicted RBP10.65□□□□□ -0.7
NICN1-205ENST00000461015 SMG6Q86US8 1419 aaKnown RBP10.65□□□□□ -0.7
NICN1-205ENST00000461015 AMPHP49418 695 aa10.64□□□□□ -0.71
NICN1-205ENST00000461015 KRT28Q7Z3Y7 464 aa10.64□□□□□ -0.71
NICN1-205ENST00000461015 WDR63Q8IWG1 891 aa10.64□□□□□ -0.71
NICN1-205ENST00000461015 SUPT16HQ9Y5B9 1047 aaKnown RBP10.64□□□□□ -0.71
NICN1-205ENST00000461015 TMEM94Q12767 1356 aa10.64□□□□□ -0.71
NICN1-205ENST00000461015 E9PSI1 815 aa10.63□□□□□ -0.71
NICN1-205ENST00000461015 FOXO3O43524 673 aa10.63□□□□□ -0.71
NICN1-205ENST00000461015 CCDC146Q8IYE0 955 aa10.63□□□□□ -0.71
NICN1-205ENST00000461015 TCP11L2Q8N4U5 519 aa10.63□□□□□ -0.71
NICN1-205ENST00000461015 DCCP43146 1447 aa10.63□□□□□ -0.71
NICN1-205ENST00000461015 SSH2Q76I76 1423 aa10.63□□□□□ -0.71
NICN1-205ENST00000461015 KIF24Q5T7B8 1368 aa10.63□□□□□ -0.71
NICN1-205ENST00000461015 CALD1Q05682 793 aaKnown RBP10.62□□□□□ -0.71
NICN1-205ENST00000461015 ORAI2Q96SN7 254 aa10.62□□□□□ -0.71
NICN1-205ENST00000461015 ZRANB1Q9UGI0 708 aa10.62□□□□□ -0.71
NICN1-205ENST00000461015 LMTK3Q96Q04 1460 aa10.61□□□□□ -0.71
NICN1-205ENST00000461015 IL13P35225 146 aa10.61□□□□□ -0.71
NICN1-205ENST00000461015 RRS1Q15050 365 aaKnown RBP10.61□□□□□ -0.71
NICN1-205ENST00000461015 PELP1Q8IZL8 1130 aaKnown RBP10.61□□□□□ -0.71
NICN1-205ENST00000461015 NPHP3Q7Z494 1330 aa10.6□□□□□ -0.71
NICN1-205ENST00000461015 LMOD3Q0VAK6 560 aa10.6□□□□□ -0.71
NICN1-205ENST00000461015 WWC1Q8IX03 1113 aa10.6□□□□□ -0.71
NICN1-205ENST00000461015 MYH16Q9H6N6 1097 aa10.6□□□□□ -0.71
NICN1-205ENST00000461015 SLAIN2Q9P270 581 aa10.6□□□□□ -0.71
NICN1-205ENST00000461015 RCAN3Q9UKA8 241 aa10.6□□□□□ -0.71
NICN1-205ENST00000461015 EMILIN1Q9Y6C2 1016 aa10.6□□□□□ -0.71
NICN1-205ENST00000461015 NWD1Q149M9 1564 aa10.6□□□□□ -0.71
NICN1-205ENST00000461015 ITSN1Q15811 1721 aa10.59□□□□□ -0.71
NICN1-205ENST00000461015 TMPOP42166 694 aaKnown RBP10.59□□□□□ -0.71
NICN1-205ENST00000461015 SLFN5Q08AF3 891 aa10.59□□□□□ -0.71
NICN1-205ENST00000461015 LMOD2Q6P5Q4 547 aa10.59□□□□□ -0.71
NICN1-205ENST00000461015 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.59□□□□□ -0.71
NICN1-205ENST00000461015 PLEKHF1Q96S99 279 aa10.59□□□□□ -0.71
NICN1-205ENST00000461015 C1orf167Q5SNV9 1468 aa10.58□□□□□ -0.72
NICN1-205ENST00000461015 FBLN1P23142 703 aa10.58□□□□□ -0.72
NICN1-205ENST00000461015 RIPK4P57078 832 aa10.58□□□□□ -0.72
NICN1-205ENST00000461015 FKBP8Q14318 412 aa10.58□□□□□ -0.72
NICN1-205ENST00000461015 NEUROD2Q15784 382 aa10.58□□□□□ -0.72
NICN1-205ENST00000461015 OVOS2A0A0J9YW53 1432 aa10.58□□□□□ -0.72
NICN1-205ENST00000461015 OVOS2Q6IE36 1432 aa10.58□□□□□ -0.72
NICN1-205ENST00000461015 MAP3K19Q56UN5 1328 aa10.58□□□□□ -0.72
NICN1-205ENST00000461015 ZNF521Q96K83 1311 aa10.58□□□□□ -0.72
NICN1-205ENST00000461015 SBNO1A3KN83 1393 aa10.57□□□□□ -0.72
NICN1-205ENST00000461015 SOX12O15370 315 aa10.57□□□□□ -0.72
NICN1-205ENST00000461015 GCP02774 474 aa10.57□□□□□ -0.72
NICN1-205ENST00000461015 TRMT2AQ8IZ69 625 aaKnown RBP10.57□□□□□ -0.72
NICN1-205ENST00000461015 IP6K1Q92551 441 aa10.57□□□□□ -0.72
NICN1-205ENST00000461015 AKAP12Q02952 1782 aa10.57□□□□□ -0.72
NICN1-205ENST00000461015 IL16Q14005 1332 aa10.57□□□□□ -0.72
NICN1-205ENST00000461015 CDK12Q9NYV4 1490 aaPredicted RBP10.56□□□□□ -0.72
NICN1-205ENST00000461015 FMN2Q9NZ56 1722 aa10.56□□□□□ -0.72
NICN1-205ENST00000461015 FLT4P35916 1363 aa10.56□□□□□ -0.72
NICN1-205ENST00000461015 CT47B1P0C2W7 299 aaPredicted RBP10.56□□□□□ -0.72
NICN1-205ENST00000461015 PRKAR2BP31323 418 aa10.56□□□□□ -0.72
NICN1-205ENST00000461015 EIF4A2Q14240 407 aaKnown RBP10.56□□□□□ -0.72
NICN1-205ENST00000461015 NFE2L2Q16236 605 aa10.56□□□□□ -0.72
NICN1-205ENST00000461015 HSP90AB2PQ58FF8 381 aa10.56□□□□□ -0.72
NICN1-205ENST00000461015 NUTM2GQ5VZR2 741 aa10.56□□□□□ -0.72
NICN1-205ENST00000461015 CDCA7LQ96GN5 454 aa10.56□□□□□ -0.72
NICN1-205ENST00000461015 RSPH6AQ9H0K4 717 aa10.56□□□□□ -0.72
NICN1-205ENST00000461015 ZNF335Q9H4Z2 1342 aaPredicted RBP10.56□□□□□ -0.72
NICN1-205ENST00000461015 MON2Q7Z3U7 1717 aa10.55□□□□□ -0.72
NICN1-205ENST00000461015 TOPAZ1Q8N9V7 1692 aa10.55□□□□□ -0.72
NICN1-205ENST00000461015 DUSP27Q5VZP5 1158 aa10.55□□□□□ -0.72
NICN1-205ENST00000461015 SULT6B1Q6IMI4 303 aa10.55□□□□□ -0.72
NICN1-205ENST00000461015 PHF23Q9BUL5 403 aaPredicted RBP10.55□□□□□ -0.72
NICN1-205ENST00000461015 KIF20BQ96Q89 1820 aa10.55□□□□□ -0.72
NICN1-205ENST00000461015 ANKRD26Q9UPS8 1709 aa10.55□□□□□ -0.72
NICN1-205ENST00000461015 SENP3-EIF4A1A0A087X0R7 540 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms