RNA–Protein interactions for RNA: ENST00000460962.5

GCOM1-203, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 3,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-203ENST00000460962 SENP3Q9H4L4 574 aaPredicted RBP15.32■□□□□ 0.04
GCOM1-203ENST00000460962 MFAP1P55081 439 aaKnown RBP15.31■□□□□ 0.04
GCOM1-203ENST00000460962 C22orf23Q9BZE7 217 aa15.31■□□□□ 0.04
GCOM1-203ENST00000460962 SIGLEC1Q9BZZ2 1709 aa15.31■□□□□ 0.04
GCOM1-203ENST00000460962 TERF2IPQ9NYB0 399 aa15.3■□□□□ 0.04
GCOM1-203ENST00000460962 PIK3C2BO00750 1634 aa15.3■□□□□ 0.04
GCOM1-203ENST00000460962 SPRYD3Q8NCJ5 442 aa15.3■□□□□ 0.04
GCOM1-203ENST00000460962 NOB1Q9ULX3 412 aaKnown RBP15.3■□□□□ 0.04
GCOM1-203ENST00000460962 IL16Q14005 1332 aa15.3■□□□□ 0.04
GCOM1-203ENST00000460962 RIPK4P57078 832 aa15.29■□□□□ 0.04
GCOM1-203ENST00000460962 IDI1Q13907 227 aa15.29■□□□□ 0.04
GCOM1-203ENST00000460962 COL3A1P02461 1466 aaPredicted RBP15.29■□□□□ 0.04
GCOM1-203ENST00000460962 ATAD2Q6PL18 1390 aa15.29■□□□□ 0.04
GCOM1-203ENST00000460962 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.28■□□□□ 0.04
GCOM1-203ENST00000460962 KIF16BQ96L93 1317 aa15.28■□□□□ 0.04
GCOM1-203ENST00000460962 FYB1O15117 783 aa15.28■□□□□ 0.04
GCOM1-203ENST00000460962 L1TD1Q5T7N2 865 aaKnown RBP15.28■□□□□ 0.04
GCOM1-203ENST00000460962 MINK1Q8N4C8 1332 aaPredicted RBP15.28■□□□□ 0.04
GCOM1-203ENST00000460962 IPO8O15397 1037 aaKnown RBP15.28■□□□□ 0.04
GCOM1-203ENST00000460962 TMEM57Q8N5G2 664 aa15.28■□□□□ 0.04
GCOM1-203ENST00000460962 DIAPH1O60610 1272 aaKnown RBP15.27■□□□□ 0.04
GCOM1-203ENST00000460962 SMC5Q8IY18 1101 aa15.27■□□□□ 0.04
GCOM1-203ENST00000460962 PNNQ9H307 717 aaKnown RBP15.27■□□□□ 0.04
GCOM1-203ENST00000460962 RAPGEF3O95398 923 aa15.26■□□□□ 0.03
GCOM1-203ENST00000460962 FAM43AQ8N2R8 423 aa15.26■□□□□ 0.03
GCOM1-203ENST00000460962 ZFYVE9O95405 1425 aa15.26■□□□□ 0.03
GCOM1-203ENST00000460962 ZBTB40Q9NUA8 1239 aa15.26■□□□□ 0.03
GCOM1-203ENST00000460962 SLC52A1Q9NWF4 448 aa15.26■□□□□ 0.03
GCOM1-203ENST00000460962 PRAM1Q96QH2 718 aa15.25■□□□□ 0.03
GCOM1-203ENST00000460962 HDGFL2Q7Z4V5 671 aaPredicted RBP15.25■□□□□ 0.03
GCOM1-203ENST00000460962 CHMP5Q9NZZ3 219 aa15.25■□□□□ 0.03
GCOM1-203ENST00000460962 MED14O60244 1454 aa15.25■□□□□ 0.03
GCOM1-203ENST00000460962 MCM4P33991 863 aa15.24■□□□□ 0.03
GCOM1-203ENST00000460962 ARHGAP31Q2M1Z3 1444 aa15.24■□□□□ 0.03
GCOM1-203ENST00000460962 HSCBQ8IWL3 235 aa15.24■□□□□ 0.03
GCOM1-203ENST00000460962 ANKRD26Q9UPS8 1709 aa15.23■□□□□ 0.03
GCOM1-203ENST00000460962 PTPRMP28827 1452 aa15.23■□□□□ 0.03
GCOM1-203ENST00000460962 ALDH1L2Q3SY69 923 aa15.23■□□□□ 0.03
GCOM1-203ENST00000460962 CD163L1Q9NR16 1453 aa15.22■□□□□ 0.03
GCOM1-203ENST00000460962 NUCB1Q02818 461 aa15.22■□□□□ 0.03
GCOM1-203ENST00000460962 FCHSD2O94868 740 aa15.21■□□□□ 0.03
GCOM1-203ENST00000460962 LNPKQ9C0E8 428 aa15.21■□□□□ 0.03
GCOM1-203ENST00000460962 PNPLA6Q8IY17 1366 aa15.21■□□□□ 0.03
GCOM1-203ENST00000460962 DIP2CQ9Y2E4 1556 aa15.21■□□□□ 0.03
GCOM1-203ENST00000460962 YTHDC2Q9H6S0 1430 aaKnown RBP15.21■□□□□ 0.03
GCOM1-203ENST00000460962 ARXQ96QS3 562 aa15.21■□□□□ 0.03
GCOM1-203ENST00000460962 NEO1Q92859 1461 aa15.2■□□□□ 0.02
GCOM1-203ENST00000460962 GOLGA6L3A6NEY3 463 aa15.2■□□□□ 0.02
GCOM1-203ENST00000460962 PRKAR2BP31323 418 aa15.2■□□□□ 0.02
GCOM1-203ENST00000460962 CHD1LQ86WJ1 897 aa15.2■□□□□ 0.02
GCOM1-203ENST00000460962 CDK19Q9BWU1 502 aa15.2■□□□□ 0.02
GCOM1-203ENST00000460962 GZF1Q9H116 711 aaPredicted RBP15.2■□□□□ 0.02
GCOM1-203ENST00000460962 CABP1Q9NZU7 370 aa15.2■□□□□ 0.02
GCOM1-203ENST00000460962 MYO5BQ9ULV0 1848 aa15.19■□□□□ 0.02
GCOM1-203ENST00000460962 ZNF428Q96B54 188 aa15.19■□□□□ 0.02
GCOM1-203ENST00000460962 CLTCQ00610 1675 aaKnown RBP15.19■□□□□ 0.02
GCOM1-203ENST00000460962 LRRC7Q96NW7 1537 aa15.18■□□□□ 0.02
GCOM1-203ENST00000460962 RBM25P49756 843 aaKnown RBP15.18■□□□□ 0.02
GCOM1-203ENST00000460962 TRAK2O60296 914 aa15.17■□□□□ 0.02
GCOM1-203ENST00000460962 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.17■□□□□ 0.02
GCOM1-203ENST00000460962 RSPH6AQ9H0K4 717 aa15.17■□□□□ 0.02
GCOM1-203ENST00000460962 CHMP4BQ9H444 224 aaKnown RBP15.17■□□□□ 0.02
GCOM1-203ENST00000460962 TMEM131LA2VDJ0 1609 aa15.16■□□□□ 0.02
GCOM1-203ENST00000460962 FAM135BQ49AJ0 1406 aa15.16■□□□□ 0.02
GCOM1-203ENST00000460962 KIF20BQ96Q89 1820 aa15.16■□□□□ 0.02
GCOM1-203ENST00000460962 XRCC6P12956 609 aaKnown RBP eCLIP15.16■□□□□ 0.02
GCOM1-203ENST00000460962 BRPF1P55201 1214 aaPredicted RBP15.16■□□□□ 0.02
GCOM1-203ENST00000460962 BMP2KLQ5H9B9 411 aa15.16■□□□□ 0.02
GCOM1-203ENST00000460962 FSD2A1L4K1 749 aa15.15■□□□□ 0.02
GCOM1-203ENST00000460962 DDX11L8A8MPP1 907 aa15.15■□□□□ 0.02
GCOM1-203ENST00000460962 CALD1Q05682 793 aaKnown RBP15.15■□□□□ 0.02
GCOM1-203ENST00000460962 ANKRD45Q5TZF3 282 aa15.15■□□□□ 0.02
GCOM1-203ENST00000460962 POLKQ9UBT6 870 aa15.15■□□□□ 0.02
GCOM1-203ENST00000460962 CDC42BPGQ6DT37 1551 aa15.15■□□□□ 0.02
GCOM1-203ENST00000460962 FBLN1P23142 703 aa15.15■□□□□ 0.02
GCOM1-203ENST00000460962 NFE2L2Q16236 605 aa15.15■□□□□ 0.02
GCOM1-203ENST00000460962 SNX21Q969T3 373 aa15.15■□□□□ 0.02
GCOM1-203ENST00000460962 PREX1Q8TCU6 1659 aa15.15■□□□□ 0.02
GCOM1-203ENST00000460962 ARHGEF40Q8TER5 1519 aa15.15■□□□□ 0.02
GCOM1-203ENST00000460962 HMOX1P09601 288 aa15.14■□□□□ 0.01
GCOM1-203ENST00000460962 GCC1Q96CN9 775 aa15.14■□□□□ 0.01
GCOM1-203ENST00000460962 ZNF692Q9BU19 519 aaPredicted RBP15.14■□□□□ 0.01
GCOM1-203ENST00000460962 STAG3Q9UJ98 1225 aa15.14■□□□□ 0.01
GCOM1-203ENST00000460962 PPIP5K1Q6PFW1 1433 aa15.14■□□□□ 0.01
GCOM1-203ENST00000460962 EIF5BO60841 1220 aaKnown RBP15.14■□□□□ 0.01
GCOM1-203ENST00000460962 ZBTB7BO15156 539 aaPredicted RBP15.14■□□□□ 0.01
GCOM1-203ENST00000460962 HSP90AB1P08238 724 aaKnown RBP15.14■□□□□ 0.01
GCOM1-203ENST00000460962 THUMPD2Q9BTF0 503 aaKnown RBP15.14■□□□□ 0.01
GCOM1-203ENST00000460962 C1orf115Q9H7X2 142 aa15.14■□□□□ 0.01
GCOM1-203ENST00000460962 YEATS2Q9ULM3 1422 aa15.13■□□□□ 0.01
GCOM1-203ENST00000460962 NCOA3Q9Y6Q9 1424 aa15.13■□□□□ 0.01
GCOM1-203ENST00000460962 VAMP4O75379 141 aa15.13■□□□□ 0.01
GCOM1-203ENST00000460962 PHACTR3Q96KR7 559 aa15.13■□□□□ 0.01
GCOM1-203ENST00000460962 MRPL50Q8N5N7 158 aaKnown RBP15.13■□□□□ 0.01
GCOM1-203ENST00000460962 ARHGAP45Q92619 1136 aa15.13■□□□□ 0.01
GCOM1-203ENST00000460962 ALKQ9UM73 1620 aa15.13■□□□□ 0.01
GCOM1-203ENST00000460962 GNAI1P63096 354 aa15.12■□□□□ 0.01
GCOM1-203ENST00000460962 FBXO31Q5XUX0 539 aaPredicted RBP15.12■□□□□ 0.01
GCOM1-203ENST00000460962 OSCARQ8IYS5 282 aa15.12■□□□□ 0.01
GCOM1-203ENST00000460962 RRAGDQ9NQL2 400 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms