RNA–Protein interactions for RNA: ENST00000460952.1

STRC-207, Transcript of stereocilin, humanhuman

TSL 2

Gene STRC, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-207ENST00000460952 PIK3C2AO00443 1686 aa15.97■□□□□ 0.15
STRC-207ENST00000460952 USP54Q70EL1 1684 aa15.97■□□□□ 0.15
STRC-207ENST00000460952 MED1Q15648 1581 aaPredicted RBP15.96■□□□□ 0.15
STRC-207ENST00000460952 DDX17Q92841 729 aaKnown RBP15.96■□□□□ 0.15
STRC-207ENST00000460952 ZNF692Q9BU19 519 aaPredicted RBP15.96■□□□□ 0.15
STRC-207ENST00000460952 PANK3Q9H999 370 aa15.96■□□□□ 0.15
STRC-207ENST00000460952 SOS2Q07890 1332 aaPredicted RBP15.95■□□□□ 0.14
STRC-207ENST00000460952 CARD14Q9BXL6 1004 aa15.95■□□□□ 0.14
STRC-207ENST00000460952 SBNO1A3KN83 1393 aa15.95■□□□□ 0.14
STRC-207ENST00000460952 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
STRC-207ENST00000460952 TNS3Q68CZ2 1445 aa15.94■□□□□ 0.14
STRC-207ENST00000460952 ANKRD26Q9UPS8 1709 aa15.94■□□□□ 0.14
STRC-207ENST00000460952 MARF1Q9Y4F3 1742 aaKnown RBP15.94■□□□□ 0.14
STRC-207ENST00000460952 XPCQ01831 940 aaPredicted RBP15.93■□□□□ 0.14
STRC-207ENST00000460952 PSME1Q06323 249 aa15.93■□□□□ 0.14
STRC-207ENST00000460952 DDX10Q13206 875 aaKnown RBP15.92■□□□□ 0.14
STRC-207ENST00000460952 KRT28Q7Z3Y7 464 aa15.92■□□□□ 0.14
STRC-207ENST00000460952 TTC21BQ7Z4L5 1316 aa15.92■□□□□ 0.14
STRC-207ENST00000460952 TTC21AQ8NDW8 1320 aa15.92■□□□□ 0.14
STRC-207ENST00000460952 CRYBG1Q9Y4K1 1723 aa15.91■□□□□ 0.14
STRC-207ENST00000460952 PER1O15534 1290 aaPredicted RBP15.91■□□□□ 0.14
STRC-207ENST00000460952 ABCA3Q99758 1704 aa15.91■□□□□ 0.14
STRC-207ENST00000460952 COL22A1Q8NFW1 1626 aaPredicted RBP15.9■□□□□ 0.14
STRC-207ENST00000460952 SHPRHQ149N8 1683 aa15.9■□□□□ 0.14
STRC-207ENST00000460952 SPATA31A3Q5VYP0 1347 aa15.9■□□□□ 0.14
STRC-207ENST00000460952 OVOS2A0A0J9YW53 1432 aa15.89■□□□□ 0.13
STRC-207ENST00000460952 OVOS2Q6IE36 1432 aa15.89■□□□□ 0.13
STRC-207ENST00000460952 ARHGEF10O15013 1369 aa15.88■□□□□ 0.13
STRC-207ENST00000460952 NSD2O96028 1365 aa15.88■□□□□ 0.13
STRC-207ENST00000460952 NPC1L1Q9UHC9 1359 aa15.88■□□□□ 0.13
STRC-207ENST00000460952 PHRF1Q9P1Y6 1649 aaKnown RBP15.88■□□□□ 0.13
STRC-207ENST00000460952 CGNL1Q0VF96 1302 aa15.88■□□□□ 0.13
STRC-207ENST00000460952 USP31Q70CQ4 1352 aa15.87■□□□□ 0.13
STRC-207ENST00000460952 AMER1Q5JTC6 1135 aaPredicted RBP15.87■□□□□ 0.13
STRC-207ENST00000460952 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.87■□□□□ 0.13
STRC-207ENST00000460952 KNSTRNQ9Y448 316 aa15.87■□□□□ 0.13
STRC-207ENST00000460952 SLIT3O75094 1523 aa15.87■□□□□ 0.13
STRC-207ENST00000460952 PNPLA6Q8IY17 1366 aa15.87■□□□□ 0.13
STRC-207ENST00000460952 PAK3O75914 559 aaPredicted RBP15.86■□□□□ 0.13
STRC-207ENST00000460952 NME9Q86XW9 330 aa15.86■□□□□ 0.13
STRC-207ENST00000460952 USP19O94966 1318 aa15.85■□□□□ 0.13
STRC-207ENST00000460952 FYB1O15117 783 aa15.84■□□□□ 0.13
STRC-207ENST00000460952 HSPA1LP34931 641 aa15.84■□□□□ 0.13
STRC-207ENST00000460952 LRRC59Q96AG4 307 aaKnown RBP15.84■□□□□ 0.13
STRC-207ENST00000460952 ABTB2Q8N961 1025 aa15.83■□□□□ 0.12
STRC-207ENST00000460952 NFAT5O94916 1531 aa15.83■□□□□ 0.12
STRC-207ENST00000460952 GGNBP2Q9H3C7 697 aa15.82■□□□□ 0.12
STRC-207ENST00000460952 ZRANB1Q9UGI0 708 aa15.82■□□□□ 0.12
STRC-207ENST00000460952 JCADQ9P266 1359 aa15.82■□□□□ 0.12
STRC-207ENST00000460952 NLRP6P59044 892 aa15.8■□□□□ 0.12
STRC-207ENST00000460952 NUTM2GQ5VZR2 741 aa15.8■□□□□ 0.12
STRC-207ENST00000460952 LMOD2Q6P5Q4 547 aa15.8■□□□□ 0.12
STRC-207ENST00000460952 PARD3Q8TEW0 1356 aa15.79■□□□□ 0.12
STRC-207ENST00000460952 CC2D1BQ5T0F9 858 aaKnown RBP15.79■□□□□ 0.12
STRC-207ENST00000460952 NLRP13Q86W25 1043 aa15.79■□□□□ 0.12
STRC-207ENST00000460952 COG3Q96JB2 828 aa15.79■□□□□ 0.12
STRC-207ENST00000460952 LTN1O94822 1766 aa15.78■□□□□ 0.12
STRC-207ENST00000460952 SMG6Q86US8 1419 aaKnown RBP15.76■□□□□ 0.11
STRC-207ENST00000460952 AATKQ6ZMQ8 1374 aa15.75■□□□□ 0.11
STRC-207ENST00000460952 ABCC6O95255 1503 aa15.75■□□□□ 0.11
STRC-207ENST00000460952 LRP6O75581 1613 aa15.75■□□□□ 0.11
STRC-207ENST00000460952 MAP2P11137 1827 aaKnown RBP15.75■□□□□ 0.11
STRC-207ENST00000460952 PEAK1Q9H792 1746 aa15.74■□□□□ 0.11
STRC-207ENST00000460952 SPATA31A6Q5VVP1 1343 aa15.74■□□□□ 0.11
STRC-207ENST00000460952 GCP02774 474 aa15.74■□□□□ 0.11
STRC-207ENST00000460952 MORC1Q86VD1 984 aa15.74■□□□□ 0.11
STRC-207ENST00000460952 KCNH5Q8NCM2 988 aa15.74■□□□□ 0.11
STRC-207ENST00000460952 CABLES1Q8TDN4 633 aa15.74■□□□□ 0.11
STRC-207ENST00000460952 CPDO75976 1380 aa15.74■□□□□ 0.11
STRC-207ENST00000460952 LMO7Q8WWI1 1683 aa15.73■□□□□ 0.11
STRC-207ENST00000460952 COL18A1P39060 1754 aa15.72■□□□□ 0.11
STRC-207ENST00000460952 CNGB1Q14028 1251 aaPredicted RBP15.72■□□□□ 0.11
STRC-207ENST00000460952 DIEXFQ68CQ4 756 aaKnown RBP15.72■□□□□ 0.11
STRC-207ENST00000460952 PRKRIP1Q9H875 184 aaPredicted RBP15.72■□□□□ 0.11
STRC-207ENST00000460952 PLEKHG5O94827 1062 aa15.71■□□□□ 0.11
STRC-207ENST00000460952 RALBP1Q15311 655 aa15.71■□□□□ 0.11
STRC-207ENST00000460952 COL14A1Q05707 1796 aaKnown RBP15.71■□□□□ 0.11
STRC-207ENST00000460952 CDK12Q9NYV4 1490 aaPredicted RBP15.71■□□□□ 0.1
STRC-207ENST00000460952 PLCH1Q4KWH8 1693 aa15.7■□□□□ 0.1
STRC-207ENST00000460952 SOX12O15370 315 aa15.7■□□□□ 0.1
STRC-207ENST00000460952 RTL1A6NKG5 1358 aa15.7■□□□□ 0.1
STRC-207ENST00000460952 KIAA0232Q92628 1395 aa15.7■□□□□ 0.1
STRC-207ENST00000460952 MAP3K19Q56UN5 1328 aa15.69■□□□□ 0.1
STRC-207ENST00000460952 ANP32CO43423 234 aa15.69■□□□□ 0.1
STRC-207ENST00000460952 FBLN1P23142 703 aa15.69■□□□□ 0.1
STRC-207ENST00000460952 TNNT2P45379 298 aaPredicted RBP15.69■□□□□ 0.1
STRC-207ENST00000460952 KIF24Q5T7B8 1368 aa15.69■□□□□ 0.1
STRC-207ENST00000460952 MYBBP1AQ9BQG0 1328 aaKnown RBP15.68■□□□□ 0.1
STRC-207ENST00000460952 HAP1P54257 671 aaPredicted RBP15.68■□□□□ 0.1
STRC-207ENST00000460952 RRS1Q15050 365 aaKnown RBP15.68■□□□□ 0.1
STRC-207ENST00000460952 ARHGEF25Q86VW2 580 aa15.68■□□□□ 0.1
STRC-207ENST00000460952 NRAPQ86VF7 1730 aa15.68■□□□□ 0.1
STRC-207ENST00000460952 NWD2Q9ULI1 1742 aa15.68■□□□□ 0.1
STRC-207ENST00000460952 RGPD5Q99666 1765 aa15.67■□□□□ 0.1
STRC-207ENST00000460952 PPP2R1AP30153 589 aa15.67■□□□□ 0.1
STRC-207ENST00000460952 ZC3H6P61129 1189 aaKnown RBP15.67■□□□□ 0.1
STRC-207ENST00000460952 POLKQ9UBT6 870 aa15.67■□□□□ 0.1
STRC-207ENST00000460952 EMILIN1Q9Y6C2 1016 aa15.67■□□□□ 0.1
STRC-207ENST00000460952 COL3A1P02461 1466 aaPredicted RBP15.66■□□□□ 0.1
STRC-207ENST00000460952 FLT4P35916 1363 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms