RNA–Protein interactions for RNA: ENST00000460886.1

COL6A2-207, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 306 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-207ENST00000460886 KDM2AQ9Y2K7 1162 aa13.67□□□□□ -0.22
COL6A2-207ENST00000460886 MINK1Q8N4C8 1332 aaPredicted RBP13.66□□□□□ -0.22
COL6A2-207ENST00000460886 SEPT12Q8IYM1 358 aa13.66□□□□□ -0.22
COL6A2-207ENST00000460886 ZRANB1Q9UGI0 708 aa13.66□□□□□ -0.22
COL6A2-207ENST00000460886 PHRF1Q9P1Y6 1649 aaKnown RBP13.64□□□□□ -0.23
COL6A2-207ENST00000460886 THSD7AQ9UPZ6 1657 aa13.64□□□□□ -0.23
COL6A2-207ENST00000460886 LMOD2Q6P5Q4 547 aa13.64□□□□□ -0.23
COL6A2-207ENST00000460886 POLR3AO14802 1390 aaPredicted RBP13.63□□□□□ -0.23
COL6A2-207ENST00000460886 KRT27Q7Z3Y8 459 aa13.62□□□□□ -0.23
COL6A2-207ENST00000460886 BTG4Q9NY30 223 aa13.62□□□□□ -0.23
COL6A2-207ENST00000460886 NGDNQ8NEJ9 315 aaKnown RBP13.61□□□□□ -0.23
COL6A2-207ENST00000460886 L3MBTL2Q969R5 705 aa13.61□□□□□ -0.23
COL6A2-207ENST00000460886 NUDT16Q96DE0 195 aaKnown RBP13.61□□□□□ -0.23
COL6A2-207ENST00000460886 SPATA31A5Q5VU36 1347 aa13.61□□□□□ -0.23
COL6A2-207ENST00000460886 SPATA31A7Q8IWB4 1347 aa13.61□□□□□ -0.23
COL6A2-207ENST00000460886 RGPD1P0DJD0 1748 aa13.6□□□□□ -0.23
COL6A2-207ENST00000460886 CCER1Q8TC90 406 aaPredicted RBP13.59□□□□□ -0.23
COL6A2-207ENST00000460886 CCDC9Q9Y3X0 531 aaKnown RBP13.59□□□□□ -0.23
COL6A2-207ENST00000460886 LRP5O75197 1615 aa13.58□□□□□ -0.24
COL6A2-207ENST00000460886 PLEKHG3A1L390 1219 aa13.58□□□□□ -0.24
COL6A2-207ENST00000460886 PLEKHG5O94827 1062 aa13.58□□□□□ -0.24
COL6A2-207ENST00000460886 DEFB132Q7Z7B7 95 aa13.58□□□□□ -0.24
COL6A2-207ENST00000460886 CDK19Q9BWU1 502 aa13.58□□□□□ -0.24
COL6A2-207ENST00000460886 CCDC61Q9Y6R9 512 aa13.58□□□□□ -0.24
COL6A2-207ENST00000460886 NRKQ7Z2Y5 1582 aa13.58□□□□□ -0.24
COL6A2-207ENST00000460886 DISP2A7MBM2 1401 aa13.57□□□□□ -0.24
COL6A2-207ENST00000460886 TNS1Q9HBL0 1735 aaKnown RBP13.57□□□□□ -0.24
COL6A2-207ENST00000460886 SF3B2Q13435 895 aaKnown RBP13.57□□□□□ -0.24
COL6A2-207ENST00000460886 FAM98CQ17RN3 349 aaKnown RBP13.57□□□□□ -0.24
COL6A2-207ENST00000460886 KIAA0232Q92628 1395 aa13.57□□□□□ -0.24
COL6A2-207ENST00000460886 LMO7Q8WWI1 1683 aa13.56□□□□□ -0.24
COL6A2-207ENST00000460886 PRDM11Q9NQV5 511 aa13.56□□□□□ -0.24
COL6A2-207ENST00000460886 CLSPNQ9HAW4 1339 aa13.56□□□□□ -0.24
COL6A2-207ENST00000460886 TONSLQ96HA7 1378 aa13.56□□□□□ -0.24
COL6A2-207ENST00000460886 PAK3O75914 559 aaPredicted RBP13.55□□□□□ -0.24
COL6A2-207ENST00000460886 NBPF8Q3BBV2 869 aa13.55□□□□□ -0.24
COL6A2-207ENST00000460886 USP19O94966 1318 aa13.55□□□□□ -0.24
COL6A2-207ENST00000460886 ACEP12821 1306 aa13.55□□□□□ -0.24
COL6A2-207ENST00000460886 SPATA31A1Q5TZJ5 1347 aa13.55□□□□□ -0.24
COL6A2-207ENST00000460886 BRD4O60885 1362 aaPredicted RBP13.55□□□□□ -0.24
COL6A2-207ENST00000460886 CPDO75976 1380 aa13.55□□□□□ -0.24
COL6A2-207ENST00000460886 QRICH2Q9H0J4 1663 aa13.54□□□□□ -0.24
COL6A2-207ENST00000460886 NBPF1Q3BBV0 1214 aa13.54□□□□□ -0.24
COL6A2-207ENST00000460886 BAG6P46379 1132 aa13.53□□□□□ -0.24
COL6A2-207ENST00000460886 CAMTA1Q9Y6Y1 1673 aa13.53□□□□□ -0.24
COL6A2-207ENST00000460886 PPIP5K1Q6PFW1 1433 aa13.52□□□□□ -0.25
COL6A2-207ENST00000460886 SSH2Q76I76 1423 aa13.52□□□□□ -0.25
COL6A2-207ENST00000460886 TRPM1Q7Z4N2 1603 aa13.51□□□□□ -0.25
COL6A2-207ENST00000460886 CENPJQ9HC77 1338 aaPredicted RBP13.51□□□□□ -0.25
COL6A2-207ENST00000460886 A0A0G2JS52 829 aa13.51□□□□□ -0.25
COL6A2-207ENST00000460886 MYT1Q01538 1121 aa13.51□□□□□ -0.25
COL6A2-207ENST00000460886 BARGINQ6ZT62 677 aa13.51□□□□□ -0.25
COL6A2-207ENST00000460886 CHRNA2Q15822 529 aa13.5□□□□□ -0.25
COL6A2-207ENST00000460886 SLIT3O75094 1523 aa13.49□□□□□ -0.25
COL6A2-207ENST00000460886 ZC3H6P61129 1189 aaKnown RBP13.49□□□□□ -0.25
COL6A2-207ENST00000460886 ABTB2Q8N961 1025 aa13.49□□□□□ -0.25
COL6A2-207ENST00000460886 PARP4Q9UKK3 1724 aaKnown RBP13.49□□□□□ -0.25
COL6A2-207ENST00000460886 USP6P35125 1406 aa13.48□□□□□ -0.25
COL6A2-207ENST00000460886 FAM182BQ5T319 152 aa13.48□□□□□ -0.25
COL6A2-207ENST00000460886 COL5A2P05997 1499 aaPredicted RBP13.48□□□□□ -0.25
COL6A2-207ENST00000460886 PARD3Q8TEW0 1356 aa13.47□□□□□ -0.25
COL6A2-207ENST00000460886 PIK3C2AO00443 1686 aa13.47□□□□□ -0.25
COL6A2-207ENST00000460886 RREB1Q92766 1687 aa13.47□□□□□ -0.25
COL6A2-207ENST00000460886 NUTM2GQ5VZR2 741 aa13.47□□□□□ -0.25
COL6A2-207ENST00000460886 FAM196AQ6ZSG2 479 aa13.47□□□□□ -0.25
COL6A2-207ENST00000460886 NLRP13Q86W25 1043 aa13.47□□□□□ -0.25
COL6A2-207ENST00000460886 STRN4Q9NRL3 753 aa13.47□□□□□ -0.25
COL6A2-207ENST00000460886 COL18A1P39060 1754 aa13.46□□□□□ -0.25
COL6A2-207ENST00000460886 GCP02774 474 aa13.46□□□□□ -0.25
COL6A2-207ENST00000460886 SRPK2P78362 688 aaKnown RBP13.46□□□□□ -0.25
COL6A2-207ENST00000460886 EN1Q05925 392 aaPredicted RBP13.46□□□□□ -0.25
COL6A2-207ENST00000460886 CABP2Q9NPB3 220 aa13.46□□□□□ -0.25
COL6A2-207ENST00000460886 THRAP3Q9Y2W1 955 aaKnown RBP13.46□□□□□ -0.25
COL6A2-207ENST00000460886 AKAP12Q02952 1782 aa13.45□□□□□ -0.26
COL6A2-207ENST00000460886 LARP1Q6PKG0 1096 aaKnown RBP13.45□□□□□ -0.26
COL6A2-207ENST00000460886 CAMKK2Q96RR4 588 aa13.45□□□□□ -0.26
COL6A2-207ENST00000460886 TIMELESSQ9UNS1 1208 aa13.45□□□□□ -0.26
COL6A2-207ENST00000460886 ROCK2O75116 1388 aaKnown RBP13.45□□□□□ -0.26
COL6A2-207ENST00000460886 PEAK1Q9H792 1746 aa13.44□□□□□ -0.26
COL6A2-207ENST00000460886 TCP11L2Q8N4U5 519 aa13.44□□□□□ -0.26
COL6A2-207ENST00000460886 CRB1P82279 1406 aa13.44□□□□□ -0.26
COL6A2-207ENST00000460886 NUP188Q5SRE5 1749 aa13.44□□□□□ -0.26
COL6A2-207ENST00000460886 AATKQ6ZMQ8 1374 aa13.44□□□□□ -0.26
COL6A2-207ENST00000460886 WNK3Q9BYP7 1800 aa13.43□□□□□ -0.26
COL6A2-207ENST00000460886 RGPD3A6NKT7 1758 aaPredicted RBP13.43□□□□□ -0.26
COL6A2-207ENST00000460886 RGPD4Q7Z3J3 1758 aa13.43□□□□□ -0.26
COL6A2-207ENST00000460886 PSDA5PKW4 1024 aaPredicted RBP13.43□□□□□ -0.26
COL6A2-207ENST00000460886 EVA1CP58658 441 aa13.43□□□□□ -0.26
COL6A2-207ENST00000460886 CABP1Q9NZU7 370 aa13.43□□□□□ -0.26
COL6A2-207ENST00000460886 LRRC37A3O60309 1634 aa13.42□□□□□ -0.26
COL6A2-207ENST00000460886 TRIM37O94972 964 aa13.42□□□□□ -0.26
COL6A2-207ENST00000460886 EZH2Q15910 746 aaKnown RBP13.42□□□□□ -0.26
COL6A2-207ENST00000460886 USP35Q9P2H5 1018 aa13.42□□□□□ -0.26
COL6A2-207ENST00000460886 EVC2Q86UK5 1308 aa13.41□□□□□ -0.26
COL6A2-207ENST00000460886 CPSF1Q10570 1443 aaKnown RBP13.41□□□□□ -0.26
COL6A2-207ENST00000460886 C11orf95C9JLR9 678 aaPredicted RBP13.41□□□□□ -0.26
COL6A2-207ENST00000460886 SBNO2Q9Y2G9 1366 aa13.41□□□□□ -0.26
COL6A2-207ENST00000460886 SBF2Q86WG5 1849 aa13.41□□□□□ -0.26
COL6A2-207ENST00000460886 USP54Q70EL1 1684 aa13.4□□□□□ -0.26
COL6A2-207ENST00000460886 ABCC6O95255 1503 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms