RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 POLR3GLQ9BT43 218 aa19.51■□□□□ 0.71
HDLBP-229ENST00000460826 A0A1W2PP64 1363 aa19.51■□□□□ 0.71
HDLBP-229ENST00000460826 NINLQ9Y2I6 1382 aa19.51■□□□□ 0.71
HDLBP-229ENST00000460826 MED1Q15648 1581 aaPredicted RBP19.5■□□□□ 0.71
HDLBP-229ENST00000460826 KTN1Q86UP2 1357 aaKnown RBP19.5■□□□□ 0.71
HDLBP-229ENST00000460826 LMOD2Q6P5Q4 547 aa19.5■□□□□ 0.71
HDLBP-229ENST00000460826 CRYBG1Q9Y4K1 1723 aa19.5■□□□□ 0.71
HDLBP-229ENST00000460826 ZNF692Q9BU19 519 aaPredicted RBP19.49■□□□□ 0.71
HDLBP-229ENST00000460826 PIK3C2AO00443 1686 aa19.49■□□□□ 0.71
HDLBP-229ENST00000460826 SPATA31A6Q5VVP1 1343 aa19.49■□□□□ 0.71
HDLBP-229ENST00000460826 ARHGEF10O15013 1369 aa19.48■□□□□ 0.71
HDLBP-229ENST00000460826 KIF7Q2M1P5 1343 aa19.48■□□□□ 0.71
HDLBP-229ENST00000460826 BRD4O60885 1362 aaPredicted RBP19.47■□□□□ 0.71
HDLBP-229ENST00000460826 NUTM2BA6NNL0 878 aaPredicted RBP19.47■□□□□ 0.71
HDLBP-229ENST00000460826 NUTM2EB1AL46 878 aaPredicted RBP19.47■□□□□ 0.71
HDLBP-229ENST00000460826 PLEKHG5O94827 1062 aa19.47■□□□□ 0.71
HDLBP-229ENST00000460826 HDGFL2Q7Z4V5 671 aaPredicted RBP19.47■□□□□ 0.71
HDLBP-229ENST00000460826 NUTM2AQ8IVF1 878 aaPredicted RBP19.47■□□□□ 0.71
HDLBP-229ENST00000460826 TERF2IPQ9NYB0 399 aa19.47■□□□□ 0.71
HDLBP-229ENST00000460826 MARF1Q9Y4F3 1742 aaKnown RBP19.47■□□□□ 0.71
HDLBP-229ENST00000460826 TTC21BQ7Z4L5 1316 aa19.47■□□□□ 0.71
HDLBP-229ENST00000460826 ANKRD36BQ8N2N9 1353 aa19.46■□□□□ 0.71
HDLBP-229ENST00000460826 NUTM2GQ5VZR2 741 aa19.46■□□□□ 0.71
HDLBP-229ENST00000460826 CABLES1Q8TDN4 633 aa19.46■□□□□ 0.71
HDLBP-229ENST00000460826 PHRF1Q9P1Y6 1649 aaKnown RBP19.45■□□□□ 0.7
HDLBP-229ENST00000460826 EDC4Q6P2E9 1401 aaKnown RBP19.44■□□□□ 0.7
HDLBP-229ENST00000460826 ABTB2Q8N961 1025 aa19.43■□□□□ 0.7
HDLBP-229ENST00000460826 WASHC2AQ641Q2 1341 aa19.43■□□□□ 0.7
HDLBP-229ENST00000460826 CCDC7Q96M83 1385 aa19.43■□□□□ 0.7
HDLBP-229ENST00000460826 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.42■□□□□ 0.7
HDLBP-229ENST00000460826 TTC21AQ8NDW8 1320 aa19.42■□□□□ 0.7
HDLBP-229ENST00000460826 USP54Q70EL1 1684 aa19.41■□□□□ 0.7
HDLBP-229ENST00000460826 ZRANB1Q9UGI0 708 aa19.41■□□□□ 0.7
HDLBP-229ENST00000460826 NME9Q86XW9 330 aa19.4■□□□□ 0.7
HDLBP-229ENST00000460826 CARD14Q9BXL6 1004 aa19.4■□□□□ 0.7
HDLBP-229ENST00000460826 KIF20BQ96Q89 1820 aa19.39■□□□□ 0.7
HDLBP-229ENST00000460826 ADAMTS2O95450 1211 aa19.39■□□□□ 0.69
HDLBP-229ENST00000460826 USP19O94966 1318 aa19.39■□□□□ 0.69
HDLBP-229ENST00000460826 NLRP6P59044 892 aa19.38■□□□□ 0.69
HDLBP-229ENST00000460826 NSD3Q9BZ95 1437 aa19.38■□□□□ 0.69
HDLBP-229ENST00000460826 SLIT3O75094 1523 aa19.37■□□□□ 0.69
HDLBP-229ENST00000460826 MEX3CQ5U5Q3 659 aaKnown RBP19.37■□□□□ 0.69
HDLBP-229ENST00000460826 NLRP13Q86W25 1043 aa19.37■□□□□ 0.69
HDLBP-229ENST00000460826 USP31Q70CQ4 1352 aa19.36■□□□□ 0.69
HDLBP-229ENST00000460826 HAP1P54257 671 aaPredicted RBP19.36■□□□□ 0.69
HDLBP-229ENST00000460826 PANK3Q9H999 370 aa19.36■□□□□ 0.69
HDLBP-229ENST00000460826 C8orf37Q96NL8 207 aa19.34■□□□□ 0.69
HDLBP-229ENST00000460826 OVOS2A0A0J9YW53 1432 aa19.34■□□□□ 0.69
HDLBP-229ENST00000460826 OVOS2Q6IE36 1432 aa19.34■□□□□ 0.69
HDLBP-229ENST00000460826 PLCH1Q4KWH8 1693 aa19.33■□□□□ 0.69
HDLBP-229ENST00000460826 FYB1O15117 783 aa19.32■□□□□ 0.68
HDLBP-229ENST00000460826 GCP02774 474 aa19.32■□□□□ 0.68
HDLBP-229ENST00000460826 RGS17Q9UGC6 210 aaPredicted RBP19.32■□□□□ 0.68
HDLBP-229ENST00000460826 NFAT5O94916 1531 aa19.31■□□□□ 0.68
HDLBP-229ENST00000460826 ZC3H6P61129 1189 aaKnown RBP19.31■□□□□ 0.68
HDLBP-229ENST00000460826 GGNBP2Q9H3C7 697 aa19.31■□□□□ 0.68
HDLBP-229ENST00000460826 COL14A1Q05707 1796 aaKnown RBP19.31■□□□□ 0.68
HDLBP-229ENST00000460826 KIAA0232Q92628 1395 aa19.31■□□□□ 0.68
HDLBP-229ENST00000460826 AFF2P51816 1311 aa19.3■□□□□ 0.68
HDLBP-229ENST00000460826 NGLY1Q96IV0 654 aa19.3■□□□□ 0.68
HDLBP-229ENST00000460826 ANKRD26Q9UPS8 1709 aa19.3■□□□□ 0.68
HDLBP-229ENST00000460826 FAM83GA6ND36 823 aa19.29■□□□□ 0.68
HDLBP-229ENST00000460826 SOX12O15370 315 aa19.29■□□□□ 0.68
HDLBP-229ENST00000460826 PHF23Q9BUL5 403 aaPredicted RBP19.29■□□□□ 0.68
HDLBP-229ENST00000460826 LTN1O94822 1766 aa19.29■□□□□ 0.68
HDLBP-229ENST00000460826 SLIT2O94813 1529 aa19.28■□□□□ 0.68
HDLBP-229ENST00000460826 NWD2Q9ULI1 1742 aa19.28■□□□□ 0.68
HDLBP-229ENST00000460826 COL18A1P39060 1754 aa19.27■□□□□ 0.68
HDLBP-229ENST00000460826 CHRNA2Q15822 529 aa19.27■□□□□ 0.68
HDLBP-229ENST00000460826 COG3Q96JB2 828 aa19.27■□□□□ 0.68
HDLBP-229ENST00000460826 PRDM11Q9NQV5 511 aa19.27■□□□□ 0.68
HDLBP-229ENST00000460826 NRAPQ86VF7 1730 aa19.27■□□□□ 0.68
HDLBP-229ENST00000460826 CPDO75976 1380 aa19.27■□□□□ 0.68
HDLBP-229ENST00000460826 LMO7Q8WWI1 1683 aa19.27■□□□□ 0.67
HDLBP-229ENST00000460826 RGPD5Q99666 1765 aa19.27■□□□□ 0.67
HDLBP-229ENST00000460826 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.26■□□□□ 0.67
HDLBP-229ENST00000460826 FNBP4Q8N3X1 1017 aaPredicted RBP19.26■□□□□ 0.67
HDLBP-229ENST00000460826 CGNL1Q0VF96 1302 aa19.25■□□□□ 0.67
HDLBP-229ENST00000460826 BCL9LQ86UU0 1499 aa19.25■□□□□ 0.67
HDLBP-229ENST00000460826 PER1O15534 1290 aaPredicted RBP19.25■□□□□ 0.67
HDLBP-229ENST00000460826 KCNH5Q8NCM2 988 aa19.25■□□□□ 0.67
HDLBP-229ENST00000460826 ZBTB7CA1YPR0 619 aa19.24■□□□□ 0.67
HDLBP-229ENST00000460826 FBLN1P23142 703 aa19.24■□□□□ 0.67
HDLBP-229ENST00000460826 POTEAQ6S8J7 498 aa19.23■□□□□ 0.67
HDLBP-229ENST00000460826 ARHGEF25Q86VW2 580 aa19.23■□□□□ 0.67
HDLBP-229ENST00000460826 USP21Q9UK80 565 aa19.23■□□□□ 0.67
HDLBP-229ENST00000460826 KNSTRNQ9Y448 316 aa19.23■□□□□ 0.67
HDLBP-229ENST00000460826 CAMTA1Q9Y6Y1 1673 aa19.23■□□□□ 0.67
HDLBP-229ENST00000460826 AMER1Q5JTC6 1135 aaPredicted RBP19.22■□□□□ 0.67
HDLBP-229ENST00000460826 BTG4Q9NY30 223 aa19.22■□□□□ 0.67
HDLBP-229ENST00000460826 MAP2P11137 1827 aaKnown RBP19.21■□□□□ 0.67
HDLBP-229ENST00000460826 ZNF772Q68DY9 489 aaPredicted RBP19.2■□□□□ 0.66
HDLBP-229ENST00000460826 AATKQ6ZMQ8 1374 aa19.19■□□□□ 0.66
HDLBP-229ENST00000460826 ATRNO75882 1429 aa19.19■□□□□ 0.66
HDLBP-229ENST00000460826 UNC5CLQ8IV45 518 aa19.19■□□□□ 0.66
HDLBP-229ENST00000460826 NSD2O96028 1365 aa19.19■□□□□ 0.66
HDLBP-229ENST00000460826 PEAK1Q9H792 1746 aa19.18■□□□□ 0.66
HDLBP-229ENST00000460826 QTRT2Q9H974 415 aaKnown RBP19.18■□□□□ 0.66
HDLBP-229ENST00000460826 AXIN2Q9Y2T1 843 aa19.18■□□□□ 0.66
HDLBP-229ENST00000460826 MAP3K19Q56UN5 1328 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms