RNA–Protein interactions for RNA: ENST00000460810.1

CCDC58-202, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-202ENST00000460810 BEGAINQ9BUH8 593 aa8.75□□□□□ -1.01
CCDC58-202ENST00000460810 LYPD8Q6UX82 237 aa8.74□□□□□ -1.01
CCDC58-202ENST00000460810 ZC3H15Q8WU90 426 aaKnown RBP8.73□□□□□ -1.01
CCDC58-202ENST00000460810 IRF7Q92985 503 aa8.73□□□□□ -1.01
CCDC58-202ENST00000460810 TLL2Q9Y6L7 1015 aa8.73□□□□□ -1.01
CCDC58-202ENST00000460810 RSBN1LQ6PCB5 846 aaPredicted RBP8.72□□□□□ -1.01
CCDC58-202ENST00000460810 ZFP42Q96MM3 310 aa8.72□□□□□ -1.01
CCDC58-202ENST00000460810 TBC1D2Q9BYX2 928 aa8.72□□□□□ -1.01
CCDC58-202ENST00000460810 FAM181BA6NEQ2 426 aa8.71□□□□□ -1.02
CCDC58-202ENST00000460810 NNTQ13423 1086 aa8.71□□□□□ -1.02
CCDC58-202ENST00000460810 FAM174AQ8TBP5 190 aa8.71□□□□□ -1.02
CCDC58-202ENST00000460810 SPTLC1O15269 473 aa8.7□□□□□ -1.02
CCDC58-202ENST00000460810 CTHP32929 405 aa8.7□□□□□ -1.02
CCDC58-202ENST00000460810 H3BM21 787 aa8.69□□□□□ -1.02
CCDC58-202ENST00000460810 SCARF1Q14162 830 aa8.69□□□□□ -1.02
CCDC58-202ENST00000460810 PRPF38BQ5VTL8 546 aaKnown RBP8.69□□□□□ -1.02
CCDC58-202ENST00000460810 CDK15Q96Q40 435 aa8.69□□□□□ -1.02
CCDC58-202ENST00000460810 ZBTB3Q9H5J0 574 aa8.69□□□□□ -1.02
CCDC58-202ENST00000460810 PCDHB15Q9Y5E8 787 aa8.69□□□□□ -1.02
CCDC58-202ENST00000460810 ADH1CP00326 375 aa8.68□□□□□ -1.02
CCDC58-202ENST00000460810 TIMP2P16035 220 aa8.68□□□□□ -1.02
CCDC58-202ENST00000460810 HRCP23327 699 aa8.68□□□□□ -1.02
CCDC58-202ENST00000460810 GMPRP36959 345 aa8.68□□□□□ -1.02
CCDC58-202ENST00000460810 MRPL14Q6P1L8 145 aaKnown RBP8.68□□□□□ -1.02
CCDC58-202ENST00000460810 KLF16Q9BXK1 252 aaPredicted RBP8.68□□□□□ -1.02
CCDC58-202ENST00000460810 CFAP99D6REC4 459 aa8.67□□□□□ -1.02
CCDC58-202ENST00000460810 F12P00748 615 aaPredicted RBP8.67□□□□□ -1.02
CCDC58-202ENST00000460810 WDR4P57081 412 aaKnown RBP8.67□□□□□ -1.02
CCDC58-202ENST00000460810 PARP9Q8IXQ6 854 aa8.67□□□□□ -1.02
CCDC58-202ENST00000460810 TRIM66O15016 1216 aa8.66□□□□□ -1.02
CCDC58-202ENST00000460810 RIC3Q7Z5B4 369 aa8.65□□□□□ -1.02
CCDC58-202ENST00000460810 ZSCAN1Q8NBB4 408 aa8.65□□□□□ -1.02
CCDC58-202ENST00000460810 LORP23490 312 aaPredicted RBP8.64□□□□□ -1.03
CCDC58-202ENST00000460810 VEGFBP49765 207 aa8.64□□□□□ -1.03
CCDC58-202ENST00000460810 NR5A1Q13285 461 aa8.64□□□□□ -1.03
CCDC58-202ENST00000460810 FOXJ1Q92949 421 aa8.64□□□□□ -1.03
CCDC58-202ENST00000460810 AK7Q96M32 723 aa8.64□□□□□ -1.03
CCDC58-202ENST00000460810 MAP10Q9P2G4 905 aa8.64□□□□□ -1.03
CCDC58-202ENST00000460810 TUSC1Q2TAM9 212 aa8.63□□□□□ -1.03
CCDC58-202ENST00000460810 BPHLQ86WA6 291 aaPredicted RBP8.63□□□□□ -1.03
CCDC58-202ENST00000460810 PURBQ96QR8 312 aaKnown RBP8.63□□□□□ -1.03
CCDC58-202ENST00000460810 ERBB4Q15303 1308 aa8.62□□□□□ -1.03
CCDC58-202ENST00000460810 ARID5BQ14865 1188 aa8.62□□□□□ -1.03
CCDC58-202ENST00000460810 AGERQ15109 404 aa8.61□□□□□ -1.03
CCDC58-202ENST00000460810 ARMC2Q8NEN0 867 aa8.61□□□□□ -1.03
CCDC58-202ENST00000460810 ZIC2O95409 532 aaPredicted RBP8.6□□□□□ -1.03
CCDC58-202ENST00000460810 VSIG8P0DPA2 414 aa8.6□□□□□ -1.03
CCDC58-202ENST00000460810 GRM5P41594 1212 aa8.6□□□□□ -1.03
CCDC58-202ENST00000460810 C4orf48Q5BLP8 95 aa8.6□□□□□ -1.03
CCDC58-202ENST00000460810 CABLES1Q8TDN4 633 aa8.6□□□□□ -1.03
CCDC58-202ENST00000460810 PER1O15534 1290 aaPredicted RBP8.59□□□□□ -1.03
CCDC58-202ENST00000460810 ITPKCQ96DU7 683 aa8.59□□□□□ -1.03
CCDC58-202ENST00000460810 ZFAND3Q9H8U3 227 aa8.58□□□□□ -1.04
CCDC58-202ENST00000460810 NUTM2BA6NNL0 878 aaPredicted RBP8.57□□□□□ -1.04
CCDC58-202ENST00000460810 NUTM2EB1AL46 878 aaPredicted RBP8.57□□□□□ -1.04
CCDC58-202ENST00000460810 LILRB3O75022 631 aa8.57□□□□□ -1.04
CCDC58-202ENST00000460810 NR3C2P08235 984 aa8.57□□□□□ -1.04
CCDC58-202ENST00000460810 CSPP1Q1MSJ5 1256 aa8.57□□□□□ -1.04
CCDC58-202ENST00000460810 NUTM2DQ5VT03 806 aaPredicted RBP8.57□□□□□ -1.04
CCDC58-202ENST00000460810 MYSM1Q5VVJ2 828 aa8.57□□□□□ -1.04
CCDC58-202ENST00000460810 SH3RF1Q7Z6J0 888 aa8.57□□□□□ -1.04
CCDC58-202ENST00000460810 NUTM2AQ8IVF1 878 aaPredicted RBP8.57□□□□□ -1.04
CCDC58-202ENST00000460810 C1QTNF2Q9BXJ5 285 aa8.57□□□□□ -1.04
CCDC58-202ENST00000460810 LIMD1Q9UGP4 676 aa8.57□□□□□ -1.04
CCDC58-202ENST00000460810 SOBPA7XYQ1 873 aa8.56□□□□□ -1.04
CCDC58-202ENST00000460810 MAN1A2O60476 641 aa8.56□□□□□ -1.04
CCDC58-202ENST00000460810 UPP2O95045 317 aa8.56□□□□□ -1.04
CCDC58-202ENST00000460810 NBPF14Q5TI25 921 aa8.56□□□□□ -1.04
CCDC58-202ENST00000460810 TSC1Q92574 1164 aa8.56□□□□□ -1.04
CCDC58-202ENST00000460810 MAP4K5Q9Y4K4 846 aa8.56□□□□□ -1.04
CCDC58-202ENST00000460810 PDE4DQ08499 809 aa8.55□□□□□ -1.04
CCDC58-202ENST00000460810 QPCTQ16769 361 aa8.55□□□□□ -1.04
CCDC58-202ENST00000460810 MEIOBQ8N635 442 aa8.55□□□□□ -1.04
CCDC58-202ENST00000460810 HELBQ8NG08 1087 aaPredicted RBP8.55□□□□□ -1.04
CCDC58-202ENST00000460810 C6orf118Q5T5N4 469 aa8.54□□□□□ -1.04
CCDC58-202ENST00000460810 TRMT44Q8IYL2 757 aaKnown RBP8.54□□□□□ -1.04
CCDC58-202ENST00000460810 LINC00528Q8N1L1 170 aa8.54□□□□□ -1.04
CCDC58-202ENST00000460810 GPKOWQ92917 476 aaPredicted RBP eCLIP8.54□□□□□ -1.04
CCDC58-202ENST00000460810 BMP2P12643 396 aa8.53□□□□□ -1.04
CCDC58-202ENST00000460810 SH3BP5LQ7L8J4 393 aa8.53□□□□□ -1.04
CCDC58-202ENST00000460810 PPFIA3O75145 1194 aa8.52□□□□□ -1.05
CCDC58-202ENST00000460810 PRKCSHP14314 528 aaPredicted RBP8.52□□□□□ -1.05
CCDC58-202ENST00000460810 VASH1Q7L8A9 365 aaPredicted RBP8.52□□□□□ -1.05
CCDC58-202ENST00000460810 EMILIN1Q9Y6C2 1016 aa8.52□□□□□ -1.05
CCDC58-202ENST00000460810 SOS2Q07890 1332 aaPredicted RBP8.52□□□□□ -1.05
CCDC58-202ENST00000460810 FSHRP23945 695 aa8.51□□□□□ -1.05
CCDC58-202ENST00000460810 TSEN34Q9BSV6 310 aaKnown RBP8.51□□□□□ -1.05
CCDC58-202ENST00000460810 RSPH6AQ9H0K4 717 aa8.51□□□□□ -1.05
CCDC58-202ENST00000460810 RTL5Q5HYW3 569 aaPredicted RBP8.5□□□□□ -1.05
CCDC58-202ENST00000460810 CCDC116Q8IYX3 515 aa8.5□□□□□ -1.05
CCDC58-202ENST00000460810 CLK2P49760 499 aaKnown RBP8.49□□□□□ -1.05
CCDC58-202ENST00000460810 BCANQ96GW7 911 aa8.49□□□□□ -1.05
CCDC58-202ENST00000460810 MAGEB6P1A0A0J9YX57 407 aa8.48□□□□□ -1.05
CCDC58-202ENST00000460810 DNMT3LQ9UJW3 386 aa8.48□□□□□ -1.05
CCDC58-202ENST00000460810 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.47□□□□□ -1.05
CCDC58-202ENST00000460810 PDXDC2PQ6P474 469 aa8.47□□□□□ -1.05
CCDC58-202ENST00000460810 ERFEQ4G0M1 354 aa8.46□□□□□ -1.06
CCDC58-202ENST00000460810 PGPEP1Q9NXJ5 209 aa8.46□□□□□ -1.06
CCDC58-202ENST00000460810 CDV3Q9UKY7 258 aaKnown RBP8.46□□□□□ -1.06
CCDC58-202ENST00000460810 TTLL8A6PVC2 850 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms