RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 CENPJQ9HC77 1338 aaPredicted RBP17.01■□□□□ 0.31
SOX2-OT-201ENST00000460739 PLEKHG5O94827 1062 aa17.01■□□□□ 0.31
SOX2-OT-201ENST00000460739 PHRF1Q9P1Y6 1649 aaKnown RBP17■□□□□ 0.31
SOX2-OT-201ENST00000460739 CCDC61Q9Y6R9 512 aa17■□□□□ 0.31
SOX2-OT-201ENST00000460739 BRWD3Q6RI45 1802 aa17■□□□□ 0.31
SOX2-OT-201ENST00000460739 PLEKHG3A1L390 1219 aa16.99■□□□□ 0.31
SOX2-OT-201ENST00000460739 FAM83GA6ND36 823 aa16.99■□□□□ 0.31
SOX2-OT-201ENST00000460739 PAK3O75914 559 aaPredicted RBP16.99■□□□□ 0.31
SOX2-OT-201ENST00000460739 NEUROD1Q13562 356 aa16.99■□□□□ 0.31
SOX2-OT-201ENST00000460739 VPS72Q15906 364 aa16.99■□□□□ 0.31
SOX2-OT-201ENST00000460739 EP400Q96L91 3159 aa16.99■□□□□ 0.31
SOX2-OT-201ENST00000460739 ACEP12821 1306 aa16.97■□□□□ 0.31
SOX2-OT-201ENST00000460739 NBPF8Q3BBV2 869 aa16.97■□□□□ 0.31
SOX2-OT-201ENST00000460739 PPIP5K1Q6PFW1 1433 aa16.96■□□□□ 0.3
SOX2-OT-201ENST00000460739 SRPK2P78362 688 aaKnown RBP16.95■□□□□ 0.3
SOX2-OT-201ENST00000460739 ROCK2O75116 1388 aaKnown RBP16.94■□□□□ 0.3
SOX2-OT-201ENST00000460739 ONECUT3O60422 494 aaPredicted RBP16.94■□□□□ 0.3
SOX2-OT-201ENST00000460739 BTG4Q9NY30 223 aa16.94■□□□□ 0.3
SOX2-OT-201ENST00000460739 CABP2Q9NPB3 220 aa16.93■□□□□ 0.3
SOX2-OT-201ENST00000460739 NRKQ7Z2Y5 1582 aa16.92■□□□□ 0.3
SOX2-OT-201ENST00000460739 BRD4O60885 1362 aaPredicted RBP16.91■□□□□ 0.3
SOX2-OT-201ENST00000460739 CCDC125Q86Z20 511 aa16.91■□□□□ 0.3
SOX2-OT-201ENST00000460739 SEPT12Q8IYM1 358 aa16.91■□□□□ 0.3
SOX2-OT-201ENST00000460739 CCDC9Q9Y3X0 531 aaKnown RBP16.91■□□□□ 0.3
SOX2-OT-201ENST00000460739 PRDM11Q9NQV5 511 aa16.9■□□□□ 0.3
SOX2-OT-201ENST00000460739 EVC2Q86UK5 1308 aa16.9■□□□□ 0.3
SOX2-OT-201ENST00000460739 KIAA0232Q92628 1395 aa16.89■□□□□ 0.3
SOX2-OT-201ENST00000460739 TRIM26Q12899 539 aaPredicted RBP16.89■□□□□ 0.29
SOX2-OT-201ENST00000460739 NUTM2GQ5VZR2 741 aa16.89■□□□□ 0.29
SOX2-OT-201ENST00000460739 ABTB2Q8N961 1025 aa16.89■□□□□ 0.29
SOX2-OT-201ENST00000460739 AKAP12Q02952 1782 aa16.88■□□□□ 0.29
SOX2-OT-201ENST00000460739 CABP1Q9NZU7 370 aa16.88■□□□□ 0.29
SOX2-OT-201ENST00000460739 USP19O94966 1318 aa16.88■□□□□ 0.29
SOX2-OT-201ENST00000460739 USP6P35125 1406 aa16.87■□□□□ 0.29
SOX2-OT-201ENST00000460739 SPATA31A5Q5VU36 1347 aa16.87■□□□□ 0.29
SOX2-OT-201ENST00000460739 SPATA31A7Q8IWB4 1347 aa16.87■□□□□ 0.29
SOX2-OT-201ENST00000460739 LMO7Q8WWI1 1683 aa16.87■□□□□ 0.29
SOX2-OT-201ENST00000460739 THSD7AQ9UPZ6 1657 aa16.87■□□□□ 0.29
SOX2-OT-201ENST00000460739 ZC3H6P61129 1189 aaKnown RBP16.86■□□□□ 0.29
SOX2-OT-201ENST00000460739 CPDO75976 1380 aa16.86■□□□□ 0.29
SOX2-OT-201ENST00000460739 TONSLQ96HA7 1378 aa16.86■□□□□ 0.29
SOX2-OT-201ENST00000460739 SBNO2Q9Y2G9 1366 aa16.86■□□□□ 0.29
SOX2-OT-201ENST00000460739 BLMP54132 1417 aaPredicted RBP16.86■□□□□ 0.29
SOX2-OT-201ENST00000460739 PIK3C2AO00443 1686 aa16.85■□□□□ 0.29
SOX2-OT-201ENST00000460739 CHRNA2Q15822 529 aa16.85■□□□□ 0.29
SOX2-OT-201ENST00000460739 FAM98CQ17RN3 349 aaKnown RBP16.85■□□□□ 0.29
SOX2-OT-201ENST00000460739 KRT27Q7Z3Y8 459 aa16.85■□□□□ 0.29
SOX2-OT-201ENST00000460739 NLRP13Q86W25 1043 aa16.85■□□□□ 0.29
SOX2-OT-201ENST00000460739 SSH2Q76I76 1423 aa16.85■□□□□ 0.29
SOX2-OT-201ENST00000460739 SLIT3O75094 1523 aa16.83■□□□□ 0.28
SOX2-OT-201ENST00000460739 CAMTA1Q9Y6Y1 1673 aa16.83■□□□□ 0.28
SOX2-OT-201ENST00000460739 SPATA31A1Q5TZJ5 1347 aa16.82■□□□□ 0.28
SOX2-OT-201ENST00000460739 GCP02774 474 aa16.82■□□□□ 0.28
SOX2-OT-201ENST00000460739 CARD11Q9BXL7 1154 aa16.82■□□□□ 0.28
SOX2-OT-201ENST00000460739 MON2Q7Z3U7 1717 aa16.82■□□□□ 0.28
SOX2-OT-201ENST00000460739 A0A0G2JS52 829 aa16.81■□□□□ 0.28
SOX2-OT-201ENST00000460739 MYT1Q01538 1121 aa16.81■□□□□ 0.28
SOX2-OT-201ENST00000460739 ZNF692Q9BU19 519 aaPredicted RBP16.81■□□□□ 0.28
SOX2-OT-201ENST00000460739 CPSF1Q10570 1443 aaKnown RBP16.8■□□□□ 0.28
SOX2-OT-201ENST00000460739 STRN4Q9NRL3 753 aa16.8■□□□□ 0.28
SOX2-OT-201ENST00000460739 RGPD1P0DJD0 1748 aa16.79■□□□□ 0.28
SOX2-OT-201ENST00000460739 NLRP6P59044 892 aa16.79■□□□□ 0.28
SOX2-OT-201ENST00000460739 COL18A1P39060 1754 aa16.78■□□□□ 0.28
SOX2-OT-201ENST00000460739 TTC21BQ7Z4L5 1316 aa16.77■□□□□ 0.28
SOX2-OT-201ENST00000460739 EVA1CP58658 441 aa16.77■□□□□ 0.28
SOX2-OT-201ENST00000460739 COL5A2P05997 1499 aaPredicted RBP16.77■□□□□ 0.28
SOX2-OT-201ENST00000460739 TTC21AQ8NDW8 1320 aa16.76■□□□□ 0.27
SOX2-OT-201ENST00000460739 USP54Q70EL1 1684 aa16.76■□□□□ 0.27
SOX2-OT-201ENST00000460739 SF3B2Q13435 895 aaKnown RBP16.76■□□□□ 0.27
SOX2-OT-201ENST00000460739 ZRANB1Q9UGI0 708 aa16.76■□□□□ 0.27
SOX2-OT-201ENST00000460739 AATKQ6ZMQ8 1374 aa16.76■□□□□ 0.27
SOX2-OT-201ENST00000460739 KTN1Q86UP2 1357 aaKnown RBP16.76■□□□□ 0.27
SOX2-OT-201ENST00000460739 CD163L1Q9NR16 1453 aa16.75■□□□□ 0.27
SOX2-OT-201ENST00000460739 LARP1Q6PKG0 1096 aaKnown RBP16.75■□□□□ 0.27
SOX2-OT-201ENST00000460739 BARGINQ6ZT62 677 aa16.75■□□□□ 0.27
SOX2-OT-201ENST00000460739 TNS1Q9HBL0 1735 aaKnown RBP16.75■□□□□ 0.27
SOX2-OT-201ENST00000460739 PARP4Q9UKK3 1724 aaKnown RBP16.74■□□□□ 0.27
SOX2-OT-201ENST00000460739 DEFB132Q7Z7B7 95 aa16.74■□□□□ 0.27
SOX2-OT-201ENST00000460739 RGPD5Q99666 1765 aa16.74■□□□□ 0.27
SOX2-OT-201ENST00000460739 FAM182BQ5T319 152 aa16.73■□□□□ 0.27
SOX2-OT-201ENST00000460739 USP35Q9P2H5 1018 aa16.73■□□□□ 0.27
SOX2-OT-201ENST00000460739 CRB1P82279 1406 aa16.72■□□□□ 0.27
SOX2-OT-201ENST00000460739 NFAT5O94916 1531 aa16.72■□□□□ 0.27
SOX2-OT-201ENST00000460739 TCP11L2Q8N4U5 519 aa16.72■□□□□ 0.27
SOX2-OT-201ENST00000460739 KCNH5Q8NCM2 988 aa16.72■□□□□ 0.27
SOX2-OT-201ENST00000460739 PUS7Q96PZ0 661 aaKnown RBP16.72■□□□□ 0.27
SOX2-OT-201ENST00000460739 THRAP3Q9Y2W1 955 aaKnown RBP16.72■□□□□ 0.27
SOX2-OT-201ENST00000460739 WNK3Q9BYP7 1800 aa16.72■□□□□ 0.27
SOX2-OT-201ENST00000460739 ZBTB7CA1YPR0 619 aa16.7■□□□□ 0.26
SOX2-OT-201ENST00000460739 BAG6P46379 1132 aa16.7■□□□□ 0.26
SOX2-OT-201ENST00000460739 ARHGEF25Q86VW2 580 aa16.7■□□□□ 0.26
SOX2-OT-201ENST00000460739 ABCC6O95255 1503 aa16.7■□□□□ 0.26
SOX2-OT-201ENST00000460739 USP31Q70CQ4 1352 aa16.69■□□□□ 0.26
SOX2-OT-201ENST00000460739 TESK2Q96S53 571 aa16.69■□□□□ 0.26
SOX2-OT-201ENST00000460739 DISP2A7MBM2 1401 aa16.69■□□□□ 0.26
SOX2-OT-201ENST00000460739 ST20-MTHFSA0A0A6YYL1 179 aa16.68■□□□□ 0.26
SOX2-OT-201ENST00000460739 FAM196AQ6ZSG2 479 aa16.68■□□□□ 0.26
SOX2-OT-201ENST00000460739 TMC1Q8TDI8 760 aa16.68■□□□□ 0.26
SOX2-OT-201ENST00000460739 SLC12A5Q9H2X9 1139 aa16.68■□□□□ 0.26
SOX2-OT-201ENST00000460739 AXIN2Q9Y2T1 843 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms