RNA–Protein interactions for RNA: ENST00000460584.1

LSG1-204, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 668 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-204ENST00000460584 NUDT16Q96DE0 195 aaKnown RBP16.66■□□□□ 0.26
LSG1-204ENST00000460584 PLEKHG3A1L390 1219 aa16.65■□□□□ 0.26
LSG1-204ENST00000460584 NGDNQ8NEJ9 315 aaKnown RBP16.65■□□□□ 0.26
LSG1-204ENST00000460584 BTG4Q9NY30 223 aa16.65■□□□□ 0.26
LSG1-204ENST00000460584 SPATA31A5Q5VU36 1347 aa16.64■□□□□ 0.25
LSG1-204ENST00000460584 SPATA31A7Q8IWB4 1347 aa16.64■□□□□ 0.25
LSG1-204ENST00000460584 SRCAPQ6ZRS2 3230 aa16.63■□□□□ 0.25
LSG1-204ENST00000460584 ITSN1Q15811 1721 aa16.63■□□□□ 0.25
LSG1-204ENST00000460584 CCDC61Q9Y6R9 512 aa16.63■□□□□ 0.25
LSG1-204ENST00000460584 CDK19Q9BWU1 502 aa16.62■□□□□ 0.25
LSG1-204ENST00000460584 CCDC9Q9Y3X0 531 aaKnown RBP16.61■□□□□ 0.25
LSG1-204ENST00000460584 TOPAZ1Q8N9V7 1692 aa16.61■□□□□ 0.25
LSG1-204ENST00000460584 NBPF8Q3BBV2 869 aa16.6■□□□□ 0.25
LSG1-204ENST00000460584 BRD4O60885 1362 aaPredicted RBP16.6■□□□□ 0.25
LSG1-204ENST00000460584 THSD7AQ9UPZ6 1657 aa16.59■□□□□ 0.25
LSG1-204ENST00000460584 SF3B2Q13435 895 aaKnown RBP16.59■□□□□ 0.25
LSG1-204ENST00000460584 FAM98CQ17RN3 349 aaKnown RBP16.59■□□□□ 0.25
LSG1-204ENST00000460584 DEFB132Q7Z7B7 95 aa16.59■□□□□ 0.25
LSG1-204ENST00000460584 DISP2A7MBM2 1401 aa16.59■□□□□ 0.25
LSG1-204ENST00000460584 PRDM11Q9NQV5 511 aa16.58■□□□□ 0.24
LSG1-204ENST00000460584 ACEP12821 1306 aa16.58■□□□□ 0.24
LSG1-204ENST00000460584 CPDO75976 1380 aa16.58■□□□□ 0.24
LSG1-204ENST00000460584 KIAA0232Q92628 1395 aa16.57■□□□□ 0.24
LSG1-204ENST00000460584 USP19O94966 1318 aa16.57■□□□□ 0.24
LSG1-204ENST00000460584 SPATA31A1Q5TZJ5 1347 aa16.57■□□□□ 0.24
LSG1-204ENST00000460584 PAK3O75914 559 aaPredicted RBP16.57■□□□□ 0.24
LSG1-204ENST00000460584 NBPF1Q3BBV0 1214 aa16.57■□□□□ 0.24
LSG1-204ENST00000460584 PHRF1Q9P1Y6 1649 aaKnown RBP16.56■□□□□ 0.24
LSG1-204ENST00000460584 PLEKHG5O94827 1062 aa16.55■□□□□ 0.24
LSG1-204ENST00000460584 BAG6P46379 1132 aa16.55■□□□□ 0.24
LSG1-204ENST00000460584 CENPJQ9HC77 1338 aaPredicted RBP16.54■□□□□ 0.24
LSG1-204ENST00000460584 BARGINQ6ZT62 677 aa16.54■□□□□ 0.24
LSG1-204ENST00000460584 SSH2Q76I76 1423 aa16.52■□□□□ 0.23
LSG1-204ENST00000460584 NRKQ7Z2Y5 1582 aa16.51■□□□□ 0.23
LSG1-204ENST00000460584 LMO7Q8WWI1 1683 aa16.51■□□□□ 0.23
LSG1-204ENST00000460584 LRP5O75197 1615 aa16.51■□□□□ 0.23
LSG1-204ENST00000460584 RGPD1P0DJD0 1748 aa16.5■□□□□ 0.23
LSG1-204ENST00000460584 CHRNA2Q15822 529 aa16.5■□□□□ 0.23
LSG1-204ENST00000460584 NLRP13Q86W25 1043 aa16.5■□□□□ 0.23
LSG1-204ENST00000460584 PPIP5K1Q6PFW1 1433 aa16.5■□□□□ 0.23
LSG1-204ENST00000460584 CAMTA1Q9Y6Y1 1673 aa16.5■□□□□ 0.23
LSG1-204ENST00000460584 A0A0G2JS52 829 aa16.49■□□□□ 0.23
LSG1-204ENST00000460584 GCP02774 474 aa16.49■□□□□ 0.23
LSG1-204ENST00000460584 ZC3H6P61129 1189 aaKnown RBP16.49■□□□□ 0.23
LSG1-204ENST00000460584 MYT1Q01538 1121 aa16.49■□□□□ 0.23
LSG1-204ENST00000460584 FAM196AQ6ZSG2 479 aa16.49■□□□□ 0.23
LSG1-204ENST00000460584 ABTB2Q8N961 1025 aa16.49■□□□□ 0.23
LSG1-204ENST00000460584 THRAP3Q9Y2W1 955 aaKnown RBP16.49■□□□□ 0.23
LSG1-204ENST00000460584 L3MBTL2Q969R5 705 aa16.48■□□□□ 0.23
LSG1-204ENST00000460584 PARD3Q8TEW0 1356 aa16.48■□□□□ 0.23
LSG1-204ENST00000460584 USP6P35125 1406 aa16.47■□□□□ 0.23
LSG1-204ENST00000460584 SRPK2P78362 688 aaKnown RBP16.47■□□□□ 0.23
LSG1-204ENST00000460584 TNS1Q9HBL0 1735 aaKnown RBP16.46■□□□□ 0.23
LSG1-204ENST00000460584 EN1Q05925 392 aaPredicted RBP16.46■□□□□ 0.23
LSG1-204ENST00000460584 NUTM2GQ5VZR2 741 aa16.46■□□□□ 0.23
LSG1-204ENST00000460584 TCP11L2Q8N4U5 519 aa16.46■□□□□ 0.23
LSG1-204ENST00000460584 CAMKK2Q96RR4 588 aa16.46■□□□□ 0.23
LSG1-204ENST00000460584 CABP2Q9NPB3 220 aa16.46■□□□□ 0.23
LSG1-204ENST00000460584 SLIT3O75094 1523 aa16.45■□□□□ 0.22
LSG1-204ENST00000460584 STRN4Q9NRL3 753 aa16.45■□□□□ 0.22
LSG1-204ENST00000460584 AATKQ6ZMQ8 1374 aa16.45■□□□□ 0.22
LSG1-204ENST00000460584 COL5A2P05997 1499 aaPredicted RBP16.44■□□□□ 0.22
LSG1-204ENST00000460584 C11orf95C9JLR9 678 aaPredicted RBP16.44■□□□□ 0.22
LSG1-204ENST00000460584 EVA1CP58658 441 aa16.44■□□□□ 0.22
LSG1-204ENST00000460584 FAM182BQ5T319 152 aa16.44■□□□□ 0.22
LSG1-204ENST00000460584 LARP1Q6PKG0 1096 aaKnown RBP16.44■□□□□ 0.22
LSG1-204ENST00000460584 CABP1Q9NZU7 370 aa16.44■□□□□ 0.22
LSG1-204ENST00000460584 QRICH2Q9H0J4 1663 aa16.43■□□□□ 0.22
LSG1-204ENST00000460584 EVC2Q86UK5 1308 aa16.43■□□□□ 0.22
LSG1-204ENST00000460584 TRPM1Q7Z4N2 1603 aa16.42■□□□□ 0.22
LSG1-204ENST00000460584 ZNF692Q9BU19 519 aaPredicted RBP16.42■□□□□ 0.22
LSG1-204ENST00000460584 CRB1P82279 1406 aa16.41■□□□□ 0.22
LSG1-204ENST00000460584 SBNO2Q9Y2G9 1366 aa16.4■□□□□ 0.22
LSG1-204ENST00000460584 TRIM37O94972 964 aa16.4■□□□□ 0.22
LSG1-204ENST00000460584 NLRP6P59044 892 aa16.4■□□□□ 0.22
LSG1-204ENST00000460584 PDE3BQ13370 1112 aa16.4■□□□□ 0.22
LSG1-204ENST00000460584 EZH2Q15910 746 aaKnown RBP16.4■□□□□ 0.22
LSG1-204ENST00000460584 PARP4Q9UKK3 1724 aaKnown RBP16.39■□□□□ 0.21
LSG1-204ENST00000460584 CPSF1Q10570 1443 aaKnown RBP16.39■□□□□ 0.21
LSG1-204ENST00000460584 BCL9O00512 1426 aa16.38■□□□□ 0.21
LSG1-204ENST00000460584 PSDA5PKW4 1024 aaPredicted RBP16.38■□□□□ 0.21
LSG1-204ENST00000460584 SIN3AQ96ST3 1273 aa16.38■□□□□ 0.21
LSG1-204ENST00000460584 USP35Q9P2H5 1018 aa16.38■□□□□ 0.21
LSG1-204ENST00000460584 TTC21AQ8NDW8 1320 aa16.38■□□□□ 0.21
LSG1-204ENST00000460584 COL18A1P39060 1754 aa16.38■□□□□ 0.21
LSG1-204ENST00000460584 ROCK2O75116 1388 aaKnown RBP16.38■□□□□ 0.21
LSG1-204ENST00000460584 PIK3C2AO00443 1686 aa16.37■□□□□ 0.21
LSG1-204ENST00000460584 ARHGEF25Q86VW2 580 aa16.37■□□□□ 0.21
LSG1-204ENST00000460584 TTC21BQ7Z4L5 1316 aa16.37■□□□□ 0.21
LSG1-204ENST00000460584 APBA3O96018 575 aa16.36■□□□□ 0.21
LSG1-204ENST00000460584 R3HDM1Q15032 1099 aaKnown RBP16.36■□□□□ 0.21
LSG1-204ENST00000460584 KCNH5Q8NCM2 988 aa16.36■□□□□ 0.21
LSG1-204ENST00000460584 RREB1Q92766 1687 aa16.36■□□□□ 0.21
LSG1-204ENST00000460584 PEAK1Q9H792 1746 aa16.36■□□□□ 0.21
LSG1-204ENST00000460584 ABCC6O95255 1503 aa16.35■□□□□ 0.21
LSG1-204ENST00000460584 CDCA7Q9BWT1 371 aaPredicted RBP16.35■□□□□ 0.21
LSG1-204ENST00000460584 WDR17Q8IZU2 1322 aa16.35■□□□□ 0.21
LSG1-204ENST00000460584 AXIN2Q9Y2T1 843 aa16.34■□□□□ 0.21
LSG1-204ENST00000460584 OVOS2A0A0G2JMS6 1433 aa16.34■□□□□ 0.21
LSG1-204ENST00000460584 OVOS2A0A0J9YW53 1432 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms