RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 NGLY1Q96IV0 654 aa18.76■□□□□ 0.59
ERCC3-205ENST00000460485 ABCC11Q96J66 1382 aa18.76■□□□□ 0.59
ERCC3-205ENST00000460485 DCCP43146 1447 aa18.75■□□□□ 0.59
ERCC3-205ENST00000460485 ZRANB1Q9UGI0 708 aa18.75■□□□□ 0.59
ERCC3-205ENST00000460485 NUTM2DQ5VT03 806 aaPredicted RBP18.74■□□□□ 0.59
ERCC3-205ENST00000460485 ADAMTS13Q76LX8 1427 aa18.74■□□□□ 0.59
ERCC3-205ENST00000460485 ATP7BP35670 1465 aa18.73■□□□□ 0.59
ERCC3-205ENST00000460485 SIRT1Q96EB6 747 aa18.73■□□□□ 0.59
ERCC3-205ENST00000460485 C8orf37Q96NL8 207 aa18.72■□□□□ 0.59
ERCC3-205ENST00000460485 PPP4R2Q9NY27 417 aa18.72■□□□□ 0.59
ERCC3-205ENST00000460485 AMOTL2Q9Y2J4 779 aa18.71■□□□□ 0.59
ERCC3-205ENST00000460485 ADGRB2O60241 1585 aa18.71■□□□□ 0.59
ERCC3-205ENST00000460485 CCDC125Q86Z20 511 aa18.7■□□□□ 0.58
ERCC3-205ENST00000460485 CARD14Q9BXL6 1004 aa18.7■□□□□ 0.58
ERCC3-205ENST00000460485 TERF2IPQ9NYB0 399 aa18.7■□□□□ 0.58
ERCC3-205ENST00000460485 POGKQ9P215 609 aa18.69■□□□□ 0.58
ERCC3-205ENST00000460485 NHSL1Q5SYE7 1610 aa18.67■□□□□ 0.58
ERCC3-205ENST00000460485 NCBP3Q53F19 620 aaKnown RBP18.67■□□□□ 0.58
ERCC3-205ENST00000460485 PNPLA6Q8IY17 1366 aa18.67■□□□□ 0.58
ERCC3-205ENST00000460485 MORC1Q86VD1 984 aa18.66■□□□□ 0.58
ERCC3-205ENST00000460485 ITSN1Q15811 1721 aa18.66■□□□□ 0.58
ERCC3-205ENST00000460485 MST1RQ04912 1400 aa18.66■□□□□ 0.58
ERCC3-205ENST00000460485 CFAP53Q96M91 514 aa18.65■□□□□ 0.58
ERCC3-205ENST00000460485 PRAM1Q96QH2 718 aa18.65■□□□□ 0.58
ERCC3-205ENST00000460485 MON2Q7Z3U7 1717 aa18.64■□□□□ 0.57
ERCC3-205ENST00000460485 SLC12A5Q9H2X9 1139 aa18.64■□□□□ 0.57
ERCC3-205ENST00000460485 TRPC5Q9UL62 973 aaPredicted RBP18.64■□□□□ 0.57
ERCC3-205ENST00000460485 A0A1W2PP64 1363 aa18.64■□□□□ 0.57
ERCC3-205ENST00000460485 PTPRUQ92729 1446 aa18.64■□□□□ 0.57
ERCC3-205ENST00000460485 AKAP12Q02952 1782 aa18.63■□□□□ 0.57
ERCC3-205ENST00000460485 SRPK2P78362 688 aaKnown RBP18.63■□□□□ 0.57
ERCC3-205ENST00000460485 HDGFL2Q7Z4V5 671 aaPredicted RBP18.63■□□□□ 0.57
ERCC3-205ENST00000460485 ADAMTS8Q9UP79 889 aa18.63■□□□□ 0.57
ERCC3-205ENST00000460485 FNBP4Q8N3X1 1017 aaPredicted RBP18.62■□□□□ 0.57
ERCC3-205ENST00000460485 CD163L1Q9NR16 1453 aa18.61■□□□□ 0.57
ERCC3-205ENST00000460485 STK26Q9P289 416 aa18.61■□□□□ 0.57
ERCC3-205ENST00000460485 USP21Q9UK80 565 aa18.61■□□□□ 0.57
ERCC3-205ENST00000460485 CDC42BPGQ6DT37 1551 aa18.6■□□□□ 0.57
ERCC3-205ENST00000460485 TOPAZ1Q8N9V7 1692 aa18.6■□□□□ 0.57
ERCC3-205ENST00000460485 ZNF521Q96K83 1311 aa18.59■□□□□ 0.57
ERCC3-205ENST00000460485 ADAMTS2O95450 1211 aa18.59■□□□□ 0.57
ERCC3-205ENST00000460485 RCAN3Q9UKA8 241 aa18.59■□□□□ 0.57
ERCC3-205ENST00000460485 EP400Q96L91 3159 aa18.58■□□□□ 0.57
ERCC3-205ENST00000460485 CABP2Q9NPB3 220 aa18.58■□□□□ 0.56
ERCC3-205ENST00000460485 MINK1Q8N4C8 1332 aaPredicted RBP18.57■□□□□ 0.56
ERCC3-205ENST00000460485 DDX17Q92841 729 aaKnown RBP18.57■□□□□ 0.56
ERCC3-205ENST00000460485 XRN1Q8IZH2 1706 aaKnown RBP18.57■□□□□ 0.56
ERCC3-205ENST00000460485 PTCH1Q13635 1447 aa18.57■□□□□ 0.56
ERCC3-205ENST00000460485 EDC4Q6P2E9 1401 aaKnown RBP18.57■□□□□ 0.56
ERCC3-205ENST00000460485 RRP1P56182 461 aaKnown RBP18.56■□□□□ 0.56
ERCC3-205ENST00000460485 CDK19Q9BWU1 502 aa18.56■□□□□ 0.56
ERCC3-205ENST00000460485 SOS2Q07890 1332 aaPredicted RBP18.55■□□□□ 0.56
ERCC3-205ENST00000460485 GOLGA2Q08379 1002 aa18.55■□□□□ 0.56
ERCC3-205ENST00000460485 ATRNO75882 1429 aa18.55■□□□□ 0.56
ERCC3-205ENST00000460485 CPSF1Q10570 1443 aaKnown RBP18.54■□□□□ 0.56
ERCC3-205ENST00000460485 ADGRL3Q9HAR2 1447 aa18.54■□□□□ 0.56
ERCC3-205ENST00000460485 METP08581 1390 aa18.54■□□□□ 0.56
ERCC3-205ENST00000460485 PLEKHH1Q9ULM0 1364 aa18.53■□□□□ 0.56
ERCC3-205ENST00000460485 WASLO00401 505 aaPredicted RBP18.52■□□□□ 0.56
ERCC3-205ENST00000460485 SAFB2Q14151 953 aaKnown RBP eCLIP18.52■□□□□ 0.56
ERCC3-205ENST00000460485 COL3A1P02461 1466 aaPredicted RBP18.52■□□□□ 0.55
ERCC3-205ENST00000460485 E9PSI1 815 aa18.51■□□□□ 0.55
ERCC3-205ENST00000460485 RUNDC1Q96C34 613 aa18.51■□□□□ 0.55
ERCC3-205ENST00000460485 C1orf167Q5SNV9 1468 aa18.51■□□□□ 0.55
ERCC3-205ENST00000460485 CCDC27Q2M243 656 aa18.5■□□□□ 0.55
ERCC3-205ENST00000460485 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.5■□□□□ 0.55
ERCC3-205ENST00000460485 PNNQ9H307 717 aaKnown RBP18.5■□□□□ 0.55
ERCC3-205ENST00000460485 NRKQ7Z2Y5 1582 aa18.5■□□□□ 0.55
ERCC3-205ENST00000460485 PPIP5K1Q6PFW1 1433 aa18.49■□□□□ 0.55
ERCC3-205ENST00000460485 IRX6P78412 446 aaPredicted RBP18.48■□□□□ 0.55
ERCC3-205ENST00000460485 MAP2P11137 1827 aaKnown RBP18.47■□□□□ 0.55
ERCC3-205ENST00000460485 MTHFSP49914 203 aa18.47■□□□□ 0.55
ERCC3-205ENST00000460485 SLFN5Q08AF3 891 aa18.47■□□□□ 0.55
ERCC3-205ENST00000460485 TRMT2AQ8IZ69 625 aaKnown RBP18.47■□□□□ 0.55
ERCC3-205ENST00000460485 GJD4Q96KN9 370 aaPredicted RBP18.47■□□□□ 0.55
ERCC3-205ENST00000460485 BCL9LQ86UU0 1499 aa18.46■□□□□ 0.55
ERCC3-205ENST00000460485 DUSP27Q5VZP5 1158 aa18.46■□□□□ 0.55
ERCC3-205ENST00000460485 ZNF692Q9BU19 519 aaPredicted RBP18.46■□□□□ 0.55
ERCC3-205ENST00000460485 TSHZ2Q9NRE2 1034 aa18.46■□□□□ 0.55
ERCC3-205ENST00000460485 COL22A1Q8NFW1 1626 aaPredicted RBP18.45■□□□□ 0.54
ERCC3-205ENST00000460485 AATKQ6ZMQ8 1374 aa18.45■□□□□ 0.54
ERCC3-205ENST00000460485 FYB1O15117 783 aa18.45■□□□□ 0.54
ERCC3-205ENST00000460485 CCDC61Q9Y6R9 512 aa18.45■□□□□ 0.54
ERCC3-205ENST00000460485 NALCNQ8IZF0 1738 aa18.45■□□□□ 0.54
ERCC3-205ENST00000460485 ORAI2Q96SN7 254 aa18.44■□□□□ 0.54
ERCC3-205ENST00000460485 CABP1Q9NZU7 370 aa18.44■□□□□ 0.54
ERCC3-205ENST00000460485 APAF1O14727 1248 aa18.43■□□□□ 0.54
ERCC3-205ENST00000460485 WDR63Q8IWG1 891 aa18.43■□□□□ 0.54
ERCC3-205ENST00000460485 CDCA7LQ96GN5 454 aa18.43■□□□□ 0.54
ERCC3-205ENST00000460485 SALL2Q9Y467 1007 aaPredicted RBP18.43■□□□□ 0.54
ERCC3-205ENST00000460485 ROBO2Q9HCK4 1378 aa18.42■□□□□ 0.54
ERCC3-205ENST00000460485 LRP5O75197 1615 aa18.42■□□□□ 0.54
ERCC3-205ENST00000460485 WAPLQ7Z5K2 1190 aa18.42■□□□□ 0.54
ERCC3-205ENST00000460485 CCDC136Q96JN2 1154 aa18.42■□□□□ 0.54
ERCC3-205ENST00000460485 ANKARQ7Z5J8 1434 aa18.41■□□□□ 0.54
ERCC3-205ENST00000460485 USP54Q70EL1 1684 aa18.41■□□□□ 0.54
ERCC3-205ENST00000460485 NUDT16Q96DE0 195 aaKnown RBP18.4■□□□□ 0.54
ERCC3-205ENST00000460485 SF3B2Q13435 895 aaKnown RBP18.39■□□□□ 0.53
ERCC3-205ENST00000460485 CCDC146Q8IYE0 955 aa18.39■□□□□ 0.53
ERCC3-205ENST00000460485 FMN2Q9NZ56 1722 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms