RNA–Protein interactions for RNA: ENST00000460345.1

TNC-204, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-204ENST00000460345 FYB1O15117 783 aa13.34□□□□□ -0.27
TNC-204ENST00000460345 TOM1O60784 492 aa13.34□□□□□ -0.27
TNC-204ENST00000460345 KRT28Q7Z3Y7 464 aa13.34□□□□□ -0.27
TNC-204ENST00000460345 MORC1Q86VD1 984 aa13.34□□□□□ -0.27
TNC-204ENST00000460345 CERKQ8TCT0 537 aa13.34□□□□□ -0.27
TNC-204ENST00000460345 GGNBP2Q9H3C7 697 aa13.34□□□□□ -0.27
TNC-204ENST00000460345 MON2Q7Z3U7 1717 aa13.33□□□□□ -0.27
TNC-204ENST00000460345 NME9Q86XW9 330 aa13.33□□□□□ -0.28
TNC-204ENST00000460345 DDX17Q92841 729 aaKnown RBP13.33□□□□□ -0.28
TNC-204ENST00000460345 KIF1AQ12756 1690 aa13.33□□□□□ -0.28
TNC-204ENST00000460345 NPHP3Q7Z494 1330 aa13.33□□□□□ -0.28
TNC-204ENST00000460345 TTC21AQ8NDW8 1320 aa13.33□□□□□ -0.28
TNC-204ENST00000460345 NSD2O96028 1365 aa13.32□□□□□ -0.28
TNC-204ENST00000460345 UBAP1LF5GYI3 381 aa13.32□□□□□ -0.28
TNC-204ENST00000460345 BRD4O60885 1362 aaPredicted RBP13.32□□□□□ -0.28
TNC-204ENST00000460345 SSH2Q76I76 1423 aa13.31□□□□□ -0.28
TNC-204ENST00000460345 TNNT2P45379 298 aaPredicted RBP13.31□□□□□ -0.28
TNC-204ENST00000460345 PIP4K2BP78356 416 aa13.31□□□□□ -0.28
TNC-204ENST00000460345 LMOD2Q6P5Q4 547 aa13.31□□□□□ -0.28
TNC-204ENST00000460345 ABTB2Q8N961 1025 aa13.31□□□□□ -0.28
TNC-204ENST00000460345 COG3Q96JB2 828 aa13.31□□□□□ -0.28
TNC-204ENST00000460345 ZRANB1Q9UGI0 708 aa13.31□□□□□ -0.28
TNC-204ENST00000460345 SCAF1Q9H7N4 1312 aaKnown RBP13.31□□□□□ -0.28
TNC-204ENST00000460345 PARD3Q8TEW0 1356 aa13.31□□□□□ -0.28
TNC-204ENST00000460345 NUTM2GQ5VZR2 741 aa13.3□□□□□ -0.28
TNC-204ENST00000460345 IQSEC2Q5JU85 1478 aa13.29□□□□□ -0.28
TNC-204ENST00000460345 NLRP6P59044 892 aa13.29□□□□□ -0.28
TNC-204ENST00000460345 MYBBP1AQ9BQG0 1328 aaKnown RBP13.29□□□□□ -0.28
TNC-204ENST00000460345 NRKQ7Z2Y5 1582 aa13.28□□□□□ -0.28
TNC-204ENST00000460345 KIF20BQ96Q89 1820 aa13.28□□□□□ -0.28
TNC-204ENST00000460345 CCER2I3L3R5 266 aa13.27□□□□□ -0.29
TNC-204ENST00000460345 PPP2R1AP30153 589 aa13.27□□□□□ -0.29
TNC-204ENST00000460345 SBNO1A3KN83 1393 aa13.26□□□□□ -0.29
TNC-204ENST00000460345 PLEKHG5O94827 1062 aa13.26□□□□□ -0.29
TNC-204ENST00000460345 USP31Q70CQ4 1352 aa13.26□□□□□ -0.29
TNC-204ENST00000460345 NLRP13Q86W25 1043 aa13.26□□□□□ -0.29
TNC-204ENST00000460345 ROBO1Q9Y6N7 1651 aa13.25□□□□□ -0.29
TNC-204ENST00000460345 PXDNQ92626 1479 aa13.25□□□□□ -0.29
TNC-204ENST00000460345 SOS2Q07890 1332 aaPredicted RBP13.25□□□□□ -0.29
TNC-204ENST00000460345 SOX12O15370 315 aa13.25□□□□□ -0.29
TNC-204ENST00000460345 MRS2Q9HD23 443 aa13.25□□□□□ -0.29
TNC-204ENST00000460345 SPATA31A3Q5VYP0 1347 aa13.24□□□□□ -0.29
TNC-204ENST00000460345 FBLN1P23142 703 aa13.24□□□□□ -0.29
TNC-204ENST00000460345 ANKRD26Q9UPS8 1709 aa13.24□□□□□ -0.29
TNC-204ENST00000460345 PIK3C2AO00443 1686 aa13.24□□□□□ -0.29
TNC-204ENST00000460345 OVOS2A0A0J9YW53 1432 aa13.23□□□□□ -0.29
TNC-204ENST00000460345 TNS3Q68CZ2 1445 aa13.23□□□□□ -0.29
TNC-204ENST00000460345 OVOS2Q6IE36 1432 aa13.23□□□□□ -0.29
TNC-204ENST00000460345 TRPM3Q9HCF6 1732 aaPredicted RBP13.23□□□□□ -0.29
TNC-204ENST00000460345 CCDC184Q52MB2 194 aa13.23□□□□□ -0.29
TNC-204ENST00000460345 PPM1GO15355 546 aaPredicted RBP13.22□□□□□ -0.29
TNC-204ENST00000460345 MTHFSP49914 203 aa13.22□□□□□ -0.29
TNC-204ENST00000460345 ARHGEF10O15013 1369 aa13.21□□□□□ -0.29
TNC-204ENST00000460345 NHSL1Q5SYE7 1610 aa13.21□□□□□ -0.29
TNC-204ENST00000460345 RRS1Q15050 365 aaKnown RBP13.21□□□□□ -0.29
TNC-204ENST00000460345 LRRC59Q96AG4 307 aaKnown RBP13.21□□□□□ -0.29
TNC-204ENST00000460345 AATKQ6ZMQ8 1374 aa13.2□□□□□ -0.3
TNC-204ENST00000460345 KCNH5Q8NCM2 988 aa13.2□□□□□ -0.3
TNC-204ENST00000460345 CFAP53Q96M91 514 aa13.2□□□□□ -0.3
TNC-204ENST00000460345 POLKQ9UBT6 870 aa13.2□□□□□ -0.3
TNC-204ENST00000460345 ALS2Q96Q42 1657 aa13.19□□□□□ -0.3
TNC-204ENST00000460345 ZBTB7CA1YPR0 619 aa13.19□□□□□ -0.3
TNC-204ENST00000460345 GCP02774 474 aa13.19□□□□□ -0.3
TNC-204ENST00000460345 EMILIN1Q9Y6C2 1016 aa13.19□□□□□ -0.3
TNC-204ENST00000460345 AHDC1Q5TGY3 1603 aaPredicted RBP13.19□□□□□ -0.3
TNC-204ENST00000460345 USP19O94966 1318 aa13.18□□□□□ -0.3
TNC-204ENST00000460345 AMPHP49418 695 aa13.18□□□□□ -0.3
TNC-204ENST00000460345 HAP1P54257 671 aaPredicted RBP13.18□□□□□ -0.3
TNC-204ENST00000460345 CABLES1Q8TDN4 633 aa13.18□□□□□ -0.3
TNC-204ENST00000460345 PHLPP1O60346 1717 aa13.16□□□□□ -0.3
TNC-204ENST00000460345 MAP3K19Q56UN5 1328 aa13.16□□□□□ -0.3
TNC-204ENST00000460345 MAP2P11137 1827 aaKnown RBP13.16□□□□□ -0.3
TNC-204ENST00000460345 USP54Q70EL1 1684 aa13.16□□□□□ -0.3
TNC-204ENST00000460345 FAM9BQ8IZU0 186 aa13.16□□□□□ -0.3
TNC-204ENST00000460345 MARF1Q9Y4F3 1742 aaKnown RBP13.16□□□□□ -0.3
TNC-204ENST00000460345 ZC3H6P61129 1189 aaKnown RBP13.15□□□□□ -0.3
TNC-204ENST00000460345 SLIT3O75094 1523 aa13.14□□□□□ -0.31
TNC-204ENST00000460345 WDR43Q15061 677 aaKnown RBP eCLIP13.14□□□□□ -0.31
TNC-204ENST00000460345 PNISRQ8TF01 805 aaKnown RBP13.14□□□□□ -0.31
TNC-204ENST00000460345 MED1Q15648 1581 aaPredicted RBP13.14□□□□□ -0.31
TNC-204ENST00000460345 PNPLA6Q8IY17 1366 aa13.13□□□□□ -0.31
TNC-204ENST00000460345 DIAPH1O60610 1272 aaKnown RBP13.13□□□□□ -0.31
TNC-204ENST00000460345 ARHGEF25Q86VW2 580 aa13.13□□□□□ -0.31
TNC-204ENST00000460345 NUDCQ9Y266 331 aa13.13□□□□□ -0.31
TNC-204ENST00000460345 COL16A1Q07092 1604 aaPredicted RBP13.13□□□□□ -0.31
TNC-204ENST00000460345 NFAT5O94916 1531 aa13.13□□□□□ -0.31
TNC-204ENST00000460345 SMG6Q86US8 1419 aaKnown RBP13.13□□□□□ -0.31
TNC-204ENST00000460345 FLT4P35916 1363 aa13.12□□□□□ -0.31
TNC-204ENST00000460345 HOXC9P31274 260 aa13.12□□□□□ -0.31
TNC-204ENST00000460345 HSPA1LP34931 641 aa13.12□□□□□ -0.31
TNC-204ENST00000460345 HSP90AB2PQ58FF8 381 aa13.12□□□□□ -0.31
TNC-204ENST00000460345 CDK12Q9NYV4 1490 aaPredicted RBP13.11□□□□□ -0.31
TNC-204ENST00000460345 INSRP06213 1382 aa13.11□□□□□ -0.31
TNC-204ENST00000460345 U2SURPO15042 1029 aaKnown RBP13.11□□□□□ -0.31
TNC-204ENST00000460345 IP6K1Q92551 441 aa13.11□□□□□ -0.31
TNC-204ENST00000460345 PHRF1Q9P1Y6 1649 aaKnown RBP13.1□□□□□ -0.31
TNC-204ENST00000460345 KIF24Q5T7B8 1368 aa13.1□□□□□ -0.31
TNC-204ENST00000460345 CHRNA2Q15822 529 aa13.1□□□□□ -0.31
TNC-204ENST00000460345 LTV1Q96GA3 475 aaPredicted RBP13.1□□□□□ -0.31
TNC-204ENST00000460345 PRDM11Q9NQV5 511 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms