RNA–Protein interactions for RNA: ENST00000460328.5

TTC3-211, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-211ENST00000460328 EHBP1Q8NDI1 1231 aa8.7□□□□□ -1.02
TTC3-211ENST00000460328 BAP1Q92560 729 aa8.7□□□□□ -1.02
TTC3-211ENST00000460328 FAM117AQ9C073 453 aa8.7□□□□□ -1.02
TTC3-211ENST00000460328 MAP10Q9P2G4 905 aa8.7□□□□□ -1.02
TTC3-211ENST00000460328 PER1O15534 1290 aaPredicted RBP8.69□□□□□ -1.02
TTC3-211ENST00000460328 RTL5Q5HYW3 569 aaPredicted RBP8.69□□□□□ -1.02
TTC3-211ENST00000460328 LCE2AQ5TA79 106 aaPredicted RBP8.69□□□□□ -1.02
TTC3-211ENST00000460328 TREML4Q6UXN2 200 aa8.69□□□□□ -1.02
TTC3-211ENST00000460328 F12P00748 615 aaPredicted RBP8.68□□□□□ -1.02
TTC3-211ENST00000460328 AXIN1O15169 862 aa8.67□□□□□ -1.02
TTC3-211ENST00000460328 ALDH1A1P00352 501 aa8.67□□□□□ -1.02
TTC3-211ENST00000460328 ZNF511Q8NB15 262 aa8.67□□□□□ -1.02
TTC3-211ENST00000460328 DDRGK1Q96HY6 314 aa8.67□□□□□ -1.02
TTC3-211ENST00000460328 DACH1Q9UI36 760 aa8.67□□□□□ -1.02
TTC3-211ENST00000460328 SIAH2O43255 324 aa8.66□□□□□ -1.02
TTC3-211ENST00000460328 CTC1Q2NKJ3 1217 aa8.66□□□□□ -1.02
TTC3-211ENST00000460328 HELBQ8NG08 1087 aaPredicted RBP8.66□□□□□ -1.02
TTC3-211ENST00000460328 PLEKHG3A1L390 1219 aa8.65□□□□□ -1.02
TTC3-211ENST00000460328 SMCPP49901 116 aaPredicted RBP8.65□□□□□ -1.02
TTC3-211ENST00000460328 SKIV2LQ15477 1246 aaKnown RBP8.65□□□□□ -1.02
TTC3-211ENST00000460328 SH3D19Q5HYK7 790 aa8.65□□□□□ -1.02
TTC3-211ENST00000460328 HPS1Q92902 700 aa8.65□□□□□ -1.02
TTC3-211ENST00000460328 ATP1B4Q9UN42 357 aaPredicted RBP8.64□□□□□ -1.03
TTC3-211ENST00000460328 PROCA1Q8NCQ7 364 aaPredicted RBP8.63□□□□□ -1.03
TTC3-211ENST00000460328 TLL2Q9Y6L7 1015 aa8.63□□□□□ -1.03
TTC3-211ENST00000460328 VARSP26640 1264 aaKnown RBP8.62□□□□□ -1.03
TTC3-211ENST00000460328 FBXO31Q5XUX0 539 aaPredicted RBP8.62□□□□□ -1.03
TTC3-211ENST00000460328 NEUROD2Q15784 382 aa8.61□□□□□ -1.03
TTC3-211ENST00000460328 FOXJ1Q92949 421 aa8.61□□□□□ -1.03
TTC3-211ENST00000460328 GMPR2Q9P2T1 348 aaKnown RBP8.61□□□□□ -1.03
TTC3-211ENST00000460328 WASF2Q9Y6W5 498 aa8.61□□□□□ -1.03
TTC3-211ENST00000460328 CTDSPL2Q05D32 466 aa8.6□□□□□ -1.03
TTC3-211ENST00000460328 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.6□□□□□ -1.03
TTC3-211ENST00000460328 C11orf95C9JLR9 678 aaPredicted RBP8.58□□□□□ -1.04
TTC3-211ENST00000460328 AGERQ15109 404 aa8.58□□□□□ -1.04
TTC3-211ENST00000460328 FAM174AQ8TBP5 190 aa8.58□□□□□ -1.04
TTC3-211ENST00000460328 ATP13A2Q9NQ11 1180 aa8.58□□□□□ -1.04
TTC3-211ENST00000460328 WFS1O76024 890 aa8.57□□□□□ -1.04
TTC3-211ENST00000460328 C4orf48Q5BLP8 95 aa8.57□□□□□ -1.04
TTC3-211ENST00000460328 PPP2R2DQ66LE6 453 aa8.57□□□□□ -1.04
TTC3-211ENST00000460328 ARMC2Q8NEN0 867 aa8.57□□□□□ -1.04
TTC3-211ENST00000460328 LRRN4Q8WUT4 740 aa8.57□□□□□ -1.04
TTC3-211ENST00000460328 TPRNQ4KMQ1 711 aa8.56□□□□□ -1.04
TTC3-211ENST00000460328 BPHLQ86WA6 291 aaPredicted RBP8.56□□□□□ -1.04
TTC3-211ENST00000460328 MPNDQ8N594 471 aa8.56□□□□□ -1.04
TTC3-211ENST00000460328 NFX1Q12986 1120 aaKnown RBP8.55□□□□□ -1.04
TTC3-211ENST00000460328 NBPF14Q5TI25 921 aa8.55□□□□□ -1.04
TTC3-211ENST00000460328 CAPN5O15484 640 aaPredicted RBP8.54□□□□□ -1.04
TTC3-211ENST00000460328 AP1G2O75843 785 aa8.54□□□□□ -1.04
TTC3-211ENST00000460328 NNTQ13423 1086 aa8.54□□□□□ -1.04
TTC3-211ENST00000460328 ARID5BQ14865 1188 aa8.54□□□□□ -1.04
TTC3-211ENST00000460328 BRPF1P55201 1214 aaPredicted RBP8.53□□□□□ -1.04
TTC3-211ENST00000460328 SH3RF1Q7Z6J0 888 aa8.53□□□□□ -1.04
TTC3-211ENST00000460328 IL27Q8NEV9 243 aa8.53□□□□□ -1.04
TTC3-211ENST00000460328 MAGEB6P1A0A0J9YX57 407 aa8.52□□□□□ -1.05
TTC3-211ENST00000460328 WIPF1O43516 503 aa8.52□□□□□ -1.05
TTC3-211ENST00000460328 ADH1CP00326 375 aa8.52□□□□□ -1.05
TTC3-211ENST00000460328 BMP1P13497 986 aa8.52□□□□□ -1.05
TTC3-211ENST00000460328 NR6A1Q15406 480 aa8.52□□□□□ -1.05
TTC3-211ENST00000460328 SH3BP5LQ7L8J4 393 aa8.52□□□□□ -1.05
TTC3-211ENST00000460328 CDK15Q96Q40 435 aa8.52□□□□□ -1.05
TTC3-211ENST00000460328 RFC5P40937 340 aa8.51□□□□□ -1.05
TTC3-211ENST00000460328 PCMTD1Q96MG8 357 aaPredicted RBP8.51□□□□□ -1.05
TTC3-211ENST00000460328 C1QTNF2Q9BXJ5 285 aa8.51□□□□□ -1.05
TTC3-211ENST00000460328 CARD14Q9BXL6 1004 aa8.51□□□□□ -1.05
TTC3-211ENST00000460328 STK17AQ9UEE5 414 aa8.51□□□□□ -1.05
TTC3-211ENST00000460328 USP17L8P0C7I0 530 aa8.5□□□□□ -1.05
TTC3-211ENST00000460328 SNRPBP14678 240 aaKnown RBP8.5□□□□□ -1.05
TTC3-211ENST00000460328 GPKOWQ92917 476 aaPredicted RBP eCLIP8.5□□□□□ -1.05
TTC3-211ENST00000460328 TRIM47Q96LD4 638 aa8.5□□□□□ -1.05
TTC3-211ENST00000460328 SENP2Q9HC62 589 aa8.5□□□□□ -1.05
TTC3-211ENST00000460328 GOPCQ9HD26 462 aa8.5□□□□□ -1.05
TTC3-211ENST00000460328 FKBPLQ9UIM3 349 aa8.5□□□□□ -1.05
TTC3-211ENST00000460328 WDR4P57081 412 aaKnown RBP8.49□□□□□ -1.05
TTC3-211ENST00000460328 TRIM46Q7Z4K8 759 aa8.49□□□□□ -1.05
TTC3-211ENST00000460328 HMX1Q9NP08 348 aaPredicted RBP8.49□□□□□ -1.05
TTC3-211ENST00000460328 NR3C2P08235 984 aa8.48□□□□□ -1.05
TTC3-211ENST00000460328 TIMP2P16035 220 aa8.48□□□□□ -1.05
TTC3-211ENST00000460328 EPS8L1Q8TE68 723 aa8.48□□□□□ -1.05
TTC3-211ENST00000460328 GRM5P41594 1212 aa8.47□□□□□ -1.05
TTC3-211ENST00000460328 INSM1Q01101 510 aaPredicted RBP8.47□□□□□ -1.05
TTC3-211ENST00000460328 NR5A1Q13285 461 aa8.47□□□□□ -1.05
TTC3-211ENST00000460328 ERFEQ4G0M1 354 aa8.47□□□□□ -1.05
TTC3-211ENST00000460328 PDXDC2PQ6P474 469 aa8.47□□□□□ -1.05
TTC3-211ENST00000460328 TRMT44Q8IYL2 757 aaKnown RBP8.47□□□□□ -1.05
TTC3-211ENST00000460328 KIFC2Q96AC6 838 aa8.47□□□□□ -1.05
TTC3-211ENST00000460328 TERTO14746 1132 aaKnown RBP8.46□□□□□ -1.06
TTC3-211ENST00000460328 FSHRP23945 695 aa8.46□□□□□ -1.06
TTC3-211ENST00000460328 VASH1Q7L8A9 365 aaPredicted RBP8.46□□□□□ -1.06
TTC3-211ENST00000460328 ARHGAP9Q9BRR9 750 aa8.46□□□□□ -1.06
TTC3-211ENST00000460328 KLF16Q9BXK1 252 aaPredicted RBP8.46□□□□□ -1.06
TTC3-211ENST00000460328 ZFAND3Q9H8U3 227 aa8.46□□□□□ -1.06
TTC3-211ENST00000460328 MAP4K5Q9Y4K4 846 aa8.46□□□□□ -1.06
TTC3-211ENST00000460328 ZC3H4Q9UPT8 1303 aaKnown RBP8.46□□□□□ -1.06
TTC3-211ENST00000460328 ZIC2O95409 532 aaPredicted RBP8.45□□□□□ -1.06
TTC3-211ENST00000460328 LCE2CQ5TA81 110 aa8.44□□□□□ -1.06
TTC3-211ENST00000460328 ITPKCQ96DU7 683 aa8.44□□□□□ -1.06
TTC3-211ENST00000460328 MRPL14Q6P1L8 145 aaKnown RBP8.43□□□□□ -1.06
TTC3-211ENST00000460328 ZBTB33Q86T24 672 aa8.43□□□□□ -1.06
TTC3-211ENST00000460328 ZFP42Q96MM3 310 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms