RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 CRYBG1Q9Y4K1 1723 aa29.96■■■□□ 2.39
SRM-202ENST00000459997 GLI3P10071 1580 aa29.96■■■□□ 2.39
SRM-202ENST00000459997 RALGAPBQ86X10 1494 aa29.96■■■□□ 2.39
SRM-202ENST00000459997 POLR3AO14802 1390 aaPredicted RBP29.96■■■□□ 2.39
SRM-202ENST00000459997 ROCK2O75116 1388 aaKnown RBP29.96■■■□□ 2.39
SRM-202ENST00000459997 ACEP12821 1306 aa29.96■■■□□ 2.39
SRM-202ENST00000459997 ATAD2Q6PL18 1390 aa29.94■■■□□ 2.38
SRM-202ENST00000459997 PLEKHG3A1L390 1219 aa29.93■■■□□ 2.38
SRM-202ENST00000459997 FAM83GA6ND36 823 aa29.93■■■□□ 2.38
SRM-202ENST00000459997 NBPF8Q3BBV2 869 aa29.92■■■□□ 2.38
SRM-202ENST00000459997 CABP2Q9NPB3 220 aa29.92■■■□□ 2.38
SRM-202ENST00000459997 PPIP5K1Q6PFW1 1433 aa29.91■■■□□ 2.38
SRM-202ENST00000459997 COL14A1Q05707 1796 aaKnown RBP29.91■■■□□ 2.38
SRM-202ENST00000459997 VPS72Q15906 364 aa29.89■■■□□ 2.38
SRM-202ENST00000459997 NRAPQ86VF7 1730 aa29.88■■■□□ 2.37
SRM-202ENST00000459997 CCDC9Q9Y3X0 531 aaKnown RBP29.88■■■□□ 2.37
SRM-202ENST00000459997 PHRF1Q9P1Y6 1649 aaKnown RBP29.88■■■□□ 2.37
SRM-202ENST00000459997 BTG4Q9NY30 223 aa29.86■■■□□ 2.37
SRM-202ENST00000459997 TONSLQ96HA7 1378 aa29.86■■■□□ 2.37
SRM-202ENST00000459997 NUTM2GQ5VZR2 741 aa29.85■■■□□ 2.37
SRM-202ENST00000459997 EVC2Q86UK5 1308 aa29.84■■■□□ 2.37
SRM-202ENST00000459997 PRDM11Q9NQV5 511 aa29.82■■■□□ 2.36
SRM-202ENST00000459997 ABTB2Q8N961 1025 aa29.8■■■□□ 2.36
SRM-202ENST00000459997 CABP1Q9NZU7 370 aa29.8■■■□□ 2.36
SRM-202ENST00000459997 BRWD3Q6RI45 1802 aa29.8■■■□□ 2.36
SRM-202ENST00000459997 KIAA0232Q92628 1395 aa29.79■■■□□ 2.36
SRM-202ENST00000459997 EP400Q96L91 3159 aa29.78■■■□□ 2.36
SRM-202ENST00000459997 SEPT12Q8IYM1 358 aa29.78■■■□□ 2.36
SRM-202ENST00000459997 NRKQ7Z2Y5 1582 aa29.77■■■□□ 2.36
SRM-202ENST00000459997 ZC3H6P61129 1189 aaKnown RBP29.76■■■□□ 2.35
SRM-202ENST00000459997 CARD11Q9BXL7 1154 aa29.76■■■□□ 2.35
SRM-202ENST00000459997 ONECUT3O60422 494 aaPredicted RBP29.75■■■□□ 2.35
SRM-202ENST00000459997 USP6P35125 1406 aa29.75■■■□□ 2.35
SRM-202ENST00000459997 CHRNA2Q15822 529 aa29.75■■■□□ 2.35
SRM-202ENST00000459997 BRD4O60885 1362 aaPredicted RBP29.75■■■□□ 2.35
SRM-202ENST00000459997 USP19O94966 1318 aa29.72■■■□□ 2.35
SRM-202ENST00000459997 A0A0G2JS52 829 aa29.72■■■□□ 2.35
SRM-202ENST00000459997 MYT1Q01538 1121 aa29.72■■■□□ 2.35
SRM-202ENST00000459997 FAM98CQ17RN3 349 aaKnown RBP29.71■■■□□ 2.35
SRM-202ENST00000459997 NLRP13Q86W25 1043 aa29.71■■■□□ 2.35
SRM-202ENST00000459997 SPATA31A5Q5VU36 1347 aa29.7■■■□□ 2.34
SRM-202ENST00000459997 SPATA31A7Q8IWB4 1347 aa29.7■■■□□ 2.34
SRM-202ENST00000459997 SBNO2Q9Y2G9 1366 aa29.69■■■□□ 2.34
SRM-202ENST00000459997 CCDC125Q86Z20 511 aa29.69■■■□□ 2.34
SRM-202ENST00000459997 AKAP12Q02952 1782 aa29.67■■■□□ 2.34
SRM-202ENST00000459997 KRT27Q7Z3Y8 459 aa29.67■■■□□ 2.34
SRM-202ENST00000459997 CPDO75976 1380 aa29.66■■■□□ 2.34
SRM-202ENST00000459997 SSH2Q76I76 1423 aa29.66■■■□□ 2.34
SRM-202ENST00000459997 STRN4Q9NRL3 753 aa29.66■■■□□ 2.34
SRM-202ENST00000459997 PIK3C2AO00443 1686 aa29.66■■■□□ 2.34
SRM-202ENST00000459997 GCP02774 474 aa29.65■■■□□ 2.34
SRM-202ENST00000459997 LMO7Q8WWI1 1683 aa29.64■■■□□ 2.34
SRM-202ENST00000459997 NLRP6P59044 892 aa29.64■■■□□ 2.34
SRM-202ENST00000459997 BLMP54132 1417 aaPredicted RBP29.63■■■□□ 2.33
SRM-202ENST00000459997 ZNF692Q9BU19 519 aaPredicted RBP29.63■■■□□ 2.33
SRM-202ENST00000459997 THSD7AQ9UPZ6 1657 aa29.63■■■□□ 2.33
SRM-202ENST00000459997 SPATA31A1Q5TZJ5 1347 aa29.62■■■□□ 2.33
SRM-202ENST00000459997 CAMTA1Q9Y6Y1 1673 aa29.62■■■□□ 2.33
SRM-202ENST00000459997 SLIT3O75094 1523 aa29.61■■■□□ 2.33
SRM-202ENST00000459997 EVA1CP58658 441 aa29.61■■■□□ 2.33
SRM-202ENST00000459997 CPSF1Q10570 1443 aaKnown RBP29.6■■■□□ 2.33
SRM-202ENST00000459997 TTC21BQ7Z4L5 1316 aa29.59■■■□□ 2.33
SRM-202ENST00000459997 KTN1Q86UP2 1357 aaKnown RBP29.58■■■□□ 2.33
SRM-202ENST00000459997 MON2Q7Z3U7 1717 aa29.57■■■□□ 2.32
SRM-202ENST00000459997 ZBTB7CA1YPR0 619 aa29.56■■■□□ 2.32
SRM-202ENST00000459997 USP35Q9P2H5 1018 aa29.56■■■□□ 2.32
SRM-202ENST00000459997 TTC21AQ8NDW8 1320 aa29.55■■■□□ 2.32
SRM-202ENST00000459997 SF3B2Q13435 895 aaKnown RBP29.55■■■□□ 2.32
SRM-202ENST00000459997 LARP1Q6PKG0 1096 aaKnown RBP29.54■■■□□ 2.32
SRM-202ENST00000459997 COL5A2P05997 1499 aaPredicted RBP29.53■■■□□ 2.32
SRM-202ENST00000459997 TMC1Q8TDI8 760 aa29.52■■■□□ 2.32
SRM-202ENST00000459997 AATKQ6ZMQ8 1374 aa29.51■■■□□ 2.31
SRM-202ENST00000459997 CD163L1Q9NR16 1453 aa29.5■■■□□ 2.31
SRM-202ENST00000459997 FAM182BQ5T319 152 aa29.5■■■□□ 2.31
SRM-202ENST00000459997 ST20-MTHFSA0A0A6YYL1 179 aa29.49■■■□□ 2.31
SRM-202ENST00000459997 DEFB132Q7Z7B7 95 aa29.49■■■□□ 2.31
SRM-202ENST00000459997 BARGINQ6ZT62 677 aa29.48■■■□□ 2.31
SRM-202ENST00000459997 KCNH5Q8NCM2 988 aa29.48■■■□□ 2.31
SRM-202ENST00000459997 COL18A1P39060 1754 aa29.47■■■□□ 2.31
SRM-202ENST00000459997 SOX12O15370 315 aa29.47■■■□□ 2.31
SRM-202ENST00000459997 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.47■■■□□ 2.31
SRM-202ENST00000459997 TCP11L2Q8N4U5 519 aa29.47■■■□□ 2.31
SRM-202ENST00000459997 TESK2Q96S53 571 aa29.47■■■□□ 2.31
SRM-202ENST00000459997 SLC12A5Q9H2X9 1139 aa29.47■■■□□ 2.31
SRM-202ENST00000459997 ZRANB1Q9UGI0 708 aa29.47■■■□□ 2.31
SRM-202ENST00000459997 HDGFL2Q7Z4V5 671 aaPredicted RBP29.46■■■□□ 2.31
SRM-202ENST00000459997 PCGF6Q9BYE7 350 aa29.46■■■□□ 2.31
SRM-202ENST00000459997 RGPD1P0DJD0 1748 aa29.45■■■□□ 2.31
SRM-202ENST00000459997 PUS7Q96PZ0 661 aaKnown RBP29.45■■■□□ 2.31
SRM-202ENST00000459997 CRB1P82279 1406 aa29.45■■■□□ 2.3
SRM-202ENST00000459997 NFAT5O94916 1531 aa29.44■■■□□ 2.3
SRM-202ENST00000459997 ARHGEF25Q86VW2 580 aa29.43■■■□□ 2.3
SRM-202ENST00000459997 THRAP3Q9Y2W1 955 aaKnown RBP29.43■■■□□ 2.3
SRM-202ENST00000459997 USP54Q70EL1 1684 aa29.42■■■□□ 2.3
SRM-202ENST00000459997 TERF2IPQ9NYB0 399 aa29.42■■■□□ 2.3
SRM-202ENST00000459997 A0A1W2PP64 1363 aa29.41■■■□□ 2.3
SRM-202ENST00000459997 EDC4Q6P2E9 1401 aaKnown RBP29.41■■■□□ 2.3
SRM-202ENST00000459997 USP31Q70CQ4 1352 aa29.4■■■□□ 2.3
SRM-202ENST00000459997 USP47Q96K76 1375 aa29.4■■■□□ 2.3
SRM-202ENST00000459997 SLC24A1O60721 1099 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms