RNA–Protein interactions for RNA: ENST00000459809.5

PHF1-206, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-206ENST00000459809 ATAD2Q6PL18 1390 aa18.65■□□□□ 0.58
PHF1-206ENST00000459809 CABP1Q9NZU7 370 aa18.64■□□□□ 0.57
PHF1-206ENST00000459809 TONSLQ96HA7 1378 aa18.64■□□□□ 0.57
PHF1-206ENST00000459809 CCDC125Q86Z20 511 aa18.63■□□□□ 0.57
PHF1-206ENST00000459809 ABTB2Q8N961 1025 aa18.63■□□□□ 0.57
PHF1-206ENST00000459809 BTG4Q9NY30 223 aa18.63■□□□□ 0.57
PHF1-206ENST00000459809 MARF1Q9Y4F3 1742 aaKnown RBP18.63■□□□□ 0.57
PHF1-206ENST00000459809 CCDC9Q9Y3X0 531 aaKnown RBP18.62■□□□□ 0.57
PHF1-206ENST00000459809 PPIP5K1Q6PFW1 1433 aa18.62■□□□□ 0.57
PHF1-206ENST00000459809 RALGAPBQ86X10 1494 aa18.62■□□□□ 0.57
PHF1-206ENST00000459809 TRPM3Q9HCF6 1732 aaPredicted RBP18.62■□□□□ 0.57
PHF1-206ENST00000459809 NLRP13Q86W25 1043 aa18.61■□□□□ 0.57
PHF1-206ENST00000459809 ZNF692Q9BU19 519 aaPredicted RBP18.61■□□□□ 0.57
PHF1-206ENST00000459809 CARD11Q9BXL7 1154 aa18.61■□□□□ 0.57
PHF1-206ENST00000459809 PRDM11Q9NQV5 511 aa18.61■□□□□ 0.57
PHF1-206ENST00000459809 ITSN1Q15811 1721 aa18.6■□□□□ 0.57
PHF1-206ENST00000459809 SEPT12Q8IYM1 358 aa18.59■□□□□ 0.57
PHF1-206ENST00000459809 ALS2Q96Q42 1657 aa18.59■□□□□ 0.57
PHF1-206ENST00000459809 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.58■□□□□ 0.57
PHF1-206ENST00000459809 NUTM2GQ5VZR2 741 aa18.58■□□□□ 0.56
PHF1-206ENST00000459809 TRPM1Q7Z4N2 1603 aa18.58■□□□□ 0.56
PHF1-206ENST00000459809 SLC24A1O60721 1099 aa18.56■□□□□ 0.56
PHF1-206ENST00000459809 ZC3H6P61129 1189 aaKnown RBP18.56■□□□□ 0.56
PHF1-206ENST00000459809 KIAA0232Q92628 1395 aa18.55■□□□□ 0.56
PHF1-206ENST00000459809 SBNO2Q9Y2G9 1366 aa18.55■□□□□ 0.56
PHF1-206ENST00000459809 GCP02774 474 aa18.55■□□□□ 0.56
PHF1-206ENST00000459809 NWD2Q9ULI1 1742 aa18.54■□□□□ 0.56
PHF1-206ENST00000459809 USP19O94966 1318 aa18.54■□□□□ 0.56
PHF1-206ENST00000459809 TOPAZ1Q8N9V7 1692 aa18.54■□□□□ 0.56
PHF1-206ENST00000459809 SPATA31A5Q5VU36 1347 aa18.53■□□□□ 0.56
PHF1-206ENST00000459809 SPATA31A7Q8IWB4 1347 aa18.53■□□□□ 0.56
PHF1-206ENST00000459809 GLI3P10071 1580 aa18.53■□□□□ 0.56
PHF1-206ENST00000459809 EVA1CP58658 441 aa18.53■□□□□ 0.56
PHF1-206ENST00000459809 NLRP6P59044 892 aa18.53■□□□□ 0.56
PHF1-206ENST00000459809 CHRNA2Q15822 529 aa18.53■□□□□ 0.56
PHF1-206ENST00000459809 KRT27Q7Z3Y8 459 aa18.53■□□□□ 0.56
PHF1-206ENST00000459809 PUS7Q96PZ0 661 aaKnown RBP18.53■□□□□ 0.56
PHF1-206ENST00000459809 CPDO75976 1380 aa18.53■□□□□ 0.56
PHF1-206ENST00000459809 USP6P35125 1406 aa18.52■□□□□ 0.56
PHF1-206ENST00000459809 QRICH2Q9H0J4 1663 aa18.52■□□□□ 0.56
PHF1-206ENST00000459809 COL14A1Q05707 1796 aaKnown RBP18.52■□□□□ 0.55
PHF1-206ENST00000459809 ABCA3Q99758 1704 aa18.52■□□□□ 0.55
PHF1-206ENST00000459809 FAM98CQ17RN3 349 aaKnown RBP18.51■□□□□ 0.55
PHF1-206ENST00000459809 TIMELESSQ9UNS1 1208 aa18.51■□□□□ 0.55
PHF1-206ENST00000459809 SSH2Q76I76 1423 aa18.49■□□□□ 0.55
PHF1-206ENST00000459809 A0A0G2JS52 829 aa18.49■□□□□ 0.55
PHF1-206ENST00000459809 MYT1Q01538 1121 aa18.49■□□□□ 0.55
PHF1-206ENST00000459809 STRN4Q9NRL3 753 aa18.49■□□□□ 0.55
PHF1-206ENST00000459809 PLCH1Q4KWH8 1693 aa18.49■□□□□ 0.55
PHF1-206ENST00000459809 SPATA31A1Q5TZJ5 1347 aa18.49■□□□□ 0.55
PHF1-206ENST00000459809 TTC21BQ7Z4L5 1316 aa18.49■□□□□ 0.55
PHF1-206ENST00000459809 TTC21AQ8NDW8 1320 aa18.49■□□□□ 0.55
PHF1-206ENST00000459809 CLSPNQ9HAW4 1339 aa18.48■□□□□ 0.55
PHF1-206ENST00000459809 SF3B2Q13435 895 aaKnown RBP18.47■□□□□ 0.55
PHF1-206ENST00000459809 KCNH5Q8NCM2 988 aa18.47■□□□□ 0.55
PHF1-206ENST00000459809 CPSF1Q10570 1443 aaKnown RBP18.47■□□□□ 0.55
PHF1-206ENST00000459809 BLMP54132 1417 aaPredicted RBP18.46■□□□□ 0.55
PHF1-206ENST00000459809 KTN1Q86UP2 1357 aaKnown RBP18.45■□□□□ 0.54
PHF1-206ENST00000459809 BARGINQ6ZT62 677 aa18.45■□□□□ 0.54
PHF1-206ENST00000459809 CRYBG1Q9Y4K1 1723 aa18.45■□□□□ 0.54
PHF1-206ENST00000459809 ST20-MTHFSA0A0A6YYL1 179 aa18.44■□□□□ 0.54
PHF1-206ENST00000459809 HDGFL2Q7Z4V5 671 aaPredicted RBP18.44■□□□□ 0.54
PHF1-206ENST00000459809 TMC1Q8TDI8 760 aa18.44■□□□□ 0.54
PHF1-206ENST00000459809 TERF2IPQ9NYB0 399 aa18.44■□□□□ 0.54
PHF1-206ENST00000459809 THRAP3Q9Y2W1 955 aaKnown RBP18.44■□□□□ 0.54
PHF1-206ENST00000459809 AATKQ6ZMQ8 1374 aa18.43■□□□□ 0.54
PHF1-206ENST00000459809 LARP1Q6PKG0 1096 aaKnown RBP18.43■□□□□ 0.54
PHF1-206ENST00000459809 SLC12A5Q9H2X9 1139 aa18.43■□□□□ 0.54
PHF1-206ENST00000459809 TCP11L2Q8N4U5 519 aa18.42■□□□□ 0.54
PHF1-206ENST00000459809 TESK2Q96S53 571 aa18.42■□□□□ 0.54
PHF1-206ENST00000459809 PCGF6Q9BYE7 350 aa18.42■□□□□ 0.54
PHF1-206ENST00000459809 ZRANB1Q9UGI0 708 aa18.42■□□□□ 0.54
PHF1-206ENST00000459809 NRAPQ86VF7 1730 aa18.42■□□□□ 0.54
PHF1-206ENST00000459809 ARHGEF25Q86VW2 580 aa18.41■□□□□ 0.54
PHF1-206ENST00000459809 USP35Q9P2H5 1018 aa18.41■□□□□ 0.54
PHF1-206ENST00000459809 PHRF1Q9P1Y6 1649 aaKnown RBP18.41■□□□□ 0.54
PHF1-206ENST00000459809 CAMTA1Q9Y6Y1 1673 aa18.41■□□□□ 0.54
PHF1-206ENST00000459809 NRKQ7Z2Y5 1582 aa18.39■□□□□ 0.53
PHF1-206ENST00000459809 FAM196AQ6ZSG2 479 aa18.39■□□□□ 0.53
PHF1-206ENST00000459809 ZBTB7CA1YPR0 619 aa18.38■□□□□ 0.53
PHF1-206ENST00000459809 PDE3BQ13370 1112 aa18.38■□□□□ 0.53
PHF1-206ENST00000459809 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.38■□□□□ 0.53
PHF1-206ENST00000459809 USP31Q70CQ4 1352 aa18.38■□□□□ 0.53
PHF1-206ENST00000459809 NINLQ9Y2I6 1382 aa18.38■□□□□ 0.53
PHF1-206ENST00000459809 SLIT3O75094 1523 aa18.38■□□□□ 0.53
PHF1-206ENST00000459809 C11orf95C9JLR9 678 aaPredicted RBP18.36■□□□□ 0.53
PHF1-206ENST00000459809 BAG6P46379 1132 aa18.36■□□□□ 0.53
PHF1-206ENST00000459809 TMF1P82094 1093 aa18.36■□□□□ 0.53
PHF1-206ENST00000459809 DEFB132Q7Z7B7 95 aa18.36■□□□□ 0.53
PHF1-206ENST00000459809 AXIN2Q9Y2T1 843 aa18.36■□□□□ 0.53
PHF1-206ENST00000459809 COL5A2P05997 1499 aaPredicted RBP18.35■□□□□ 0.53
PHF1-206ENST00000459809 CRB1P82279 1406 aa18.35■□□□□ 0.53
PHF1-206ENST00000459809 CDCA8Q53HL2 280 aa18.35■□□□□ 0.53
PHF1-206ENST00000459809 CD163L1Q9NR16 1453 aa18.34■□□□□ 0.53
PHF1-206ENST00000459809 FAM182BQ5T319 152 aa18.34■□□□□ 0.53
PHF1-206ENST00000459809 TOM1L2Q6ZVM7 507 aa18.34■□□□□ 0.53
PHF1-206ENST00000459809 LMO7Q8WWI1 1683 aa18.34■□□□□ 0.53
PHF1-206ENST00000459809 EDC4Q6P2E9 1401 aaKnown RBP18.33■□□□□ 0.53
PHF1-206ENST00000459809 BRWD3Q6RI45 1802 aa18.33■□□□□ 0.53
PHF1-206ENST00000459809 WDR17Q8IZU2 1322 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms