RNA–Protein interactions for RNA: ENST00000459670.2

NEDD9-205, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-205ENST00000459670 RBM33Q96EV2 1170 aaKnown RBP14.28□□□□□ -0.12
NEDD9-205ENST00000459670 ABCA3Q99758 1704 aa14.27□□□□□ -0.12
NEDD9-205ENST00000459670 C19orf44Q9H6X5 657 aa14.27□□□□□ -0.13
NEDD9-205ENST00000459670 MED1Q15648 1581 aaPredicted RBP14.26□□□□□ -0.13
NEDD9-205ENST00000459670 PXDNQ92626 1479 aa14.26□□□□□ -0.13
NEDD9-205ENST00000459670 USP31Q70CQ4 1352 aa14.26□□□□□ -0.13
NEDD9-205ENST00000459670 FYB1O15117 783 aa14.26□□□□□ -0.13
NEDD9-205ENST00000459670 DMRT2Q9Y5R5 561 aa14.26□□□□□ -0.13
NEDD9-205ENST00000459670 SLIT3O75094 1523 aa14.25□□□□□ -0.13
NEDD9-205ENST00000459670 NFAT5O94916 1531 aa14.25□□□□□ -0.13
NEDD9-205ENST00000459670 CC2D1BQ5T0F9 858 aaKnown RBP14.25□□□□□ -0.13
NEDD9-205ENST00000459670 HDGFL2Q7Z4V5 671 aaPredicted RBP14.25□□□□□ -0.13
NEDD9-205ENST00000459670 LTN1O94822 1766 aa14.24□□□□□ -0.13
NEDD9-205ENST00000459670 RGPD1P0DJD0 1748 aa14.24□□□□□ -0.13
NEDD9-205ENST00000459670 INSRP06213 1382 aa14.24□□□□□ -0.13
NEDD9-205ENST00000459670 TTC21BQ7Z4L5 1316 aa14.24□□□□□ -0.13
NEDD9-205ENST00000459670 SCAF1Q9H7N4 1312 aaKnown RBP14.24□□□□□ -0.13
NEDD9-205ENST00000459670 PPP2R1AP30153 589 aa14.24□□□□□ -0.13
NEDD9-205ENST00000459670 NLRP13Q86W25 1043 aa14.24□□□□□ -0.13
NEDD9-205ENST00000459670 ZNF692Q9BU19 519 aaPredicted RBP14.24□□□□□ -0.13
NEDD9-205ENST00000459670 MSH6P52701 1360 aa14.23□□□□□ -0.13
NEDD9-205ENST00000459670 AATKQ6ZMQ8 1374 aa14.22□□□□□ -0.13
NEDD9-205ENST00000459670 TTC21AQ8NDW8 1320 aa14.22□□□□□ -0.13
NEDD9-205ENST00000459670 NUTM2FA1L443 756 aa14.22□□□□□ -0.13
NEDD9-205ENST00000459670 CDK12Q9NYV4 1490 aaPredicted RBP14.22□□□□□ -0.13
NEDD9-205ENST00000459670 BLMP54132 1417 aaPredicted RBP14.22□□□□□ -0.13
NEDD9-205ENST00000459670 AHDC1Q5TGY3 1603 aaPredicted RBP14.22□□□□□ -0.13
NEDD9-205ENST00000459670 PNPLA6Q8IY17 1366 aa14.22□□□□□ -0.13
NEDD9-205ENST00000459670 ROBO1Q9Y6N7 1651 aa14.21□□□□□ -0.13
NEDD9-205ENST00000459670 IQSEC2Q5JU85 1478 aa14.21□□□□□ -0.13
NEDD9-205ENST00000459670 PHF8Q9UPP1 1060 aa14.21□□□□□ -0.13
NEDD9-205ENST00000459670 PNISRQ8TF01 805 aaKnown RBP14.2□□□□□ -0.14
NEDD9-205ENST00000459670 NME9Q86XW9 330 aa14.19□□□□□ -0.14
NEDD9-205ENST00000459670 PMFBP1Q8TBY8 1022 aa14.19□□□□□ -0.14
NEDD9-205ENST00000459670 ORAI2Q96SN7 254 aa14.19□□□□□ -0.14
NEDD9-205ENST00000459670 CAMTA1Q9Y6Y1 1673 aa14.18□□□□□ -0.14
NEDD9-205ENST00000459670 CADPS2Q86UW7 1296 aa14.18□□□□□ -0.14
NEDD9-205ENST00000459670 GGNBP2Q9H3C7 697 aa14.18□□□□□ -0.14
NEDD9-205ENST00000459670 COL18A1P39060 1754 aa14.18□□□□□ -0.14
NEDD9-205ENST00000459670 COL22A1Q8NFW1 1626 aaPredicted RBP14.17□□□□□ -0.14
NEDD9-205ENST00000459670 MRS2Q9HD23 443 aa14.17□□□□□ -0.14
NEDD9-205ENST00000459670 ZRANB1Q9UGI0 708 aa14.17□□□□□ -0.14
NEDD9-205ENST00000459670 USP19O94966 1318 aa14.15□□□□□ -0.14
NEDD9-205ENST00000459670 COL16A1Q07092 1604 aaPredicted RBP14.15□□□□□ -0.14
NEDD9-205ENST00000459670 SBNO1A3KN83 1393 aa14.15□□□□□ -0.14
NEDD9-205ENST00000459670 MORC1Q86VD1 984 aa14.15□□□□□ -0.14
NEDD9-205ENST00000459670 ABCC6O95255 1503 aa14.15□□□□□ -0.14
NEDD9-205ENST00000459670 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.14□□□□□ -0.15
NEDD9-205ENST00000459670 TNS3Q68CZ2 1445 aa14.14□□□□□ -0.15
NEDD9-205ENST00000459670 LMO7Q8WWI1 1683 aa14.14□□□□□ -0.15
NEDD9-205ENST00000459670 ATF3P18847 181 aa14.13□□□□□ -0.15
NEDD9-205ENST00000459670 ESCO1Q5FWF5 840 aa14.13□□□□□ -0.15
NEDD9-205ENST00000459670 BRINP3Q76B58 766 aa14.13□□□□□ -0.15
NEDD9-205ENST00000459670 C14orf37Q86TY3 774 aa14.13□□□□□ -0.15
NEDD9-205ENST00000459670 NGDNQ8NEJ9 315 aaKnown RBP14.13□□□□□ -0.15
NEDD9-205ENST00000459670 RGPD5Q99666 1765 aa14.13□□□□□ -0.15
NEDD9-205ENST00000459670 CNGB1Q14028 1251 aaPredicted RBP14.11□□□□□ -0.15
NEDD9-205ENST00000459670 POLKQ9UBT6 870 aa14.11□□□□□ -0.15
NEDD9-205ENST00000459670 RGPD2P0DJD1 1756 aa14.11□□□□□ -0.15
NEDD9-205ENST00000459670 SOS2Q07890 1332 aaPredicted RBP14.11□□□□□ -0.15
NEDD9-205ENST00000459670 KIF24Q5T7B8 1368 aa14.1□□□□□ -0.15
NEDD9-205ENST00000459670 MTHFSP49914 203 aa14.09□□□□□ -0.15
NEDD9-205ENST00000459670 FAM208AQ9UK61 1670 aaKnown RBP14.09□□□□□ -0.15
NEDD9-205ENST00000459670 NPHP3Q7Z494 1330 aa14.09□□□□□ -0.15
NEDD9-205ENST00000459670 RTL1A6NKG5 1358 aa14.09□□□□□ -0.15
NEDD9-205ENST00000459670 NCAPD2Q15021 1401 aa14.08□□□□□ -0.15
NEDD9-205ENST00000459670 DLG5Q8TDM6 1919 aa14.08□□□□□ -0.16
NEDD9-205ENST00000459670 PHLPP1O60346 1717 aa14.08□□□□□ -0.16
NEDD9-205ENST00000459670 FOXO3O43524 673 aa14.08□□□□□ -0.16
NEDD9-205ENST00000459670 COG3Q96JB2 828 aa14.08□□□□□ -0.16
NEDD9-205ENST00000459670 SLAIN2Q9P270 581 aa14.08□□□□□ -0.16
NEDD9-205ENST00000459670 FBLN1P23142 703 aa14.07□□□□□ -0.16
NEDD9-205ENST00000459670 EMILIN1Q9Y6C2 1016 aa14.07□□□□□ -0.16
NEDD9-205ENST00000459670 SPATA31A3Q5VYP0 1347 aa14.06□□□□□ -0.16
NEDD9-205ENST00000459670 TNNT2P45379 298 aaPredicted RBP14.05□□□□□ -0.16
NEDD9-205ENST00000459670 KRT28Q7Z3Y7 464 aa14.05□□□□□ -0.16
NEDD9-205ENST00000459670 DDX17Q92841 729 aaKnown RBP14.05□□□□□ -0.16
NEDD9-205ENST00000459670 MAP3K19Q56UN5 1328 aa14.05□□□□□ -0.16
NEDD9-205ENST00000459670 FLT4P35916 1363 aa14.04□□□□□ -0.16
NEDD9-205ENST00000459670 FAM9BQ8IZU0 186 aa14.03□□□□□ -0.16
NEDD9-205ENST00000459670 ZBED9Q6R2W3 1325 aa14.03□□□□□ -0.16
NEDD9-205ENST00000459670 ARHGEF10O15013 1369 aa14.03□□□□□ -0.16
NEDD9-205ENST00000459670 XPCQ01831 940 aaPredicted RBP14.02□□□□□ -0.17
NEDD9-205ENST00000459670 PSME1Q06323 249 aa14.02□□□□□ -0.17
NEDD9-205ENST00000459670 RRS1Q15050 365 aaKnown RBP14.02□□□□□ -0.17
NEDD9-205ENST00000459670 ABTB2Q8N961 1025 aa14.02□□□□□ -0.17
NEDD9-205ENST00000459670 ADAMTS8Q9UP79 889 aa14.02□□□□□ -0.17
NEDD9-205ENST00000459670 CPDO75976 1380 aa14.01□□□□□ -0.17
NEDD9-205ENST00000459670 KDRP35968 1356 aa14.01□□□□□ -0.17
NEDD9-205ENST00000459670 IL13P35225 146 aa14.01□□□□□ -0.17
NEDD9-205ENST00000459670 NLRP6P59044 892 aa14.01□□□□□ -0.17
NEDD9-205ENST00000459670 VIRMAQ69YN4 1812 aaKnown RBP14.01□□□□□ -0.17
NEDD9-205ENST00000459670 NRAPQ86VF7 1730 aa14.01□□□□□ -0.17
NEDD9-205ENST00000459670 LRRC37A3O60309 1634 aa14.01□□□□□ -0.17
NEDD9-205ENST00000459670 ZNF521Q96K83 1311 aa14□□□□□ -0.17
NEDD9-205ENST00000459670 YTHDC1Q96MU7 727 aaKnown RBP14□□□□□ -0.17
NEDD9-205ENST00000459670 WNK3Q9BYP7 1800 aa13.99□□□□□ -0.17
NEDD9-205ENST00000459670 PLCH1Q4KWH8 1693 aa13.99□□□□□ -0.17
NEDD9-205ENST00000459670 ARHGEF25Q86VW2 580 aa13.98□□□□□ -0.17
NEDD9-205ENST00000459670 CFAP53Q96M91 514 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms