RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 WDR43Q15061 677 aaKnown RBP eCLIP32.69■■■□□ 2.82
U2AF1-204ENST00000459639 NME9Q86XW9 330 aa32.69■■■□□ 2.82
U2AF1-204ENST00000459639 NGDNQ8NEJ9 315 aaKnown RBP32.69■■■□□ 2.82
U2AF1-204ENST00000459639 DCCP43146 1447 aa32.69■■■□□ 2.82
U2AF1-204ENST00000459639 TMEM94Q12767 1356 aa32.69■■■□□ 2.82
U2AF1-204ENST00000459639 MTHFSP49914 203 aa32.68■■■□□ 2.82
U2AF1-204ENST00000459639 TTC21AQ8NDW8 1320 aa32.67■■■□□ 2.82
U2AF1-204ENST00000459639 XIRP1Q702N8 1843 aaKnown RBP32.67■■■□□ 2.82
U2AF1-204ENST00000459639 CFAP53Q96M91 514 aa32.66■■■□□ 2.82
U2AF1-204ENST00000459639 C19orf44Q9H6X5 657 aa32.66■■■□□ 2.82
U2AF1-204ENST00000459639 MAP2P11137 1827 aaKnown RBP32.65■■■□□ 2.82
U2AF1-204ENST00000459639 PHF8Q9UPP1 1060 aa32.65■■■□□ 2.82
U2AF1-204ENST00000459639 COG3Q96JB2 828 aa32.64■■■□□ 2.82
U2AF1-204ENST00000459639 KIF1AQ12756 1690 aa32.64■■■□□ 2.82
U2AF1-204ENST00000459639 OVOS2A0A0J9YW53 1432 aa32.64■■■□□ 2.82
U2AF1-204ENST00000459639 OVOS2Q6IE36 1432 aa32.64■■■□□ 2.82
U2AF1-204ENST00000459639 USP54Q70EL1 1684 aa32.63■■■□□ 2.81
U2AF1-204ENST00000459639 ADAMTS8Q9UP79 889 aa32.62■■■□□ 2.81
U2AF1-204ENST00000459639 AATKQ6ZMQ8 1374 aa32.62■■■□□ 2.81
U2AF1-204ENST00000459639 PIK3C2AO00443 1686 aa32.62■■■□□ 2.81
U2AF1-204ENST00000459639 COL3A1P02461 1466 aaPredicted RBP32.6■■■□□ 2.81
U2AF1-204ENST00000459639 SMG6Q86US8 1419 aaKnown RBP32.6■■■□□ 2.81
U2AF1-204ENST00000459639 ZRANB1Q9UGI0 708 aa32.59■■■□□ 2.81
U2AF1-204ENST00000459639 DMRT2Q9Y5R5 561 aa32.58■■■□□ 2.81
U2AF1-204ENST00000459639 C1orf167Q5SNV9 1468 aa32.58■■■□□ 2.81
U2AF1-204ENST00000459639 USP31Q70CQ4 1352 aa32.57■■■□□ 2.8
U2AF1-204ENST00000459639 LRRC7Q96NW7 1537 aa32.57■■■□□ 2.8
U2AF1-204ENST00000459639 ESCO1Q5FWF5 840 aa32.56■■■□□ 2.8
U2AF1-204ENST00000459639 PNPLA6Q8IY17 1366 aa32.55■■■□□ 2.8
U2AF1-204ENST00000459639 MST1RQ04912 1400 aa32.55■■■□□ 2.8
U2AF1-204ENST00000459639 MSH6P52701 1360 aa32.54■■■□□ 2.8
U2AF1-204ENST00000459639 MARF1Q9Y4F3 1742 aaKnown RBP32.54■■■□□ 2.8
U2AF1-204ENST00000459639 ATF3P18847 181 aa32.53■■■□□ 2.8
U2AF1-204ENST00000459639 CDK12Q9NYV4 1490 aaPredicted RBP32.53■■■□□ 2.8
U2AF1-204ENST00000459639 ZNF335Q9H4Z2 1342 aaPredicted RBP32.53■■■□□ 2.8
U2AF1-204ENST00000459639 POLKQ9UBT6 870 aa32.52■■■□□ 2.8
U2AF1-204ENST00000459639 CADPS2Q86UW7 1296 aa32.5■■■□□ 2.79
U2AF1-204ENST00000459639 ORAI2Q96SN7 254 aa32.48■■■□□ 2.79
U2AF1-204ENST00000459639 TRPM3Q9HCF6 1732 aaPredicted RBP32.46■■■□□ 2.79
U2AF1-204ENST00000459639 NUDCQ9Y266 331 aa32.45■■■□□ 2.79
U2AF1-204ENST00000459639 PSME1Q06323 249 aa32.43■■■□□ 2.78
U2AF1-204ENST00000459639 FBLN1P23142 703 aa32.43■■■□□ 2.78
U2AF1-204ENST00000459639 EMILIN1Q9Y6C2 1016 aa32.43■■■□□ 2.78
U2AF1-204ENST00000459639 DIAPH1O60610 1272 aaKnown RBP32.41■■■□□ 2.78
U2AF1-204ENST00000459639 PAK3O75914 559 aaPredicted RBP32.4■■■□□ 2.78
U2AF1-204ENST00000459639 PEAK1Q9H792 1746 aa32.39■■■□□ 2.78
U2AF1-204ENST00000459639 PPM1GO15355 546 aaPredicted RBP32.39■■■□□ 2.78
U2AF1-204ENST00000459639 NLRP6P59044 892 aa32.39■■■□□ 2.78
U2AF1-204ENST00000459639 ABTB2Q8N961 1025 aa32.39■■■□□ 2.78
U2AF1-204ENST00000459639 SENP3-EIF4A1A0A087X0R7 540 aa32.38■■■□□ 2.77
U2AF1-204ENST00000459639 RRS1Q15050 365 aaKnown RBP32.38■■■□□ 2.77
U2AF1-204ENST00000459639 CCDC146Q8IYE0 955 aa32.38■■■□□ 2.77
U2AF1-204ENST00000459639 FOXO3O43524 673 aa32.37■■■□□ 2.77
U2AF1-204ENST00000459639 U2AF1L5P0DN76 240 aaPredicted RBP32.37■■■□□ 2.77
U2AF1-204ENST00000459639 U2AF1Q01081 240 aaKnown RBP eCLIP32.37■■■□□ 2.77
U2AF1-204ENST00000459639 IQSEC2Q5JU85 1478 aa32.36■■■□□ 2.77
U2AF1-204ENST00000459639 PDE3BQ13370 1112 aa32.35■■■□□ 2.77
U2AF1-204ENST00000459639 NGEFQ8N5V2 710 aa32.35■■■□□ 2.77
U2AF1-204ENST00000459639 RUNDC1Q96C34 613 aa32.34■■■□□ 2.77
U2AF1-204ENST00000459639 ALS2Q96Q42 1657 aa32.34■■■□□ 2.77
U2AF1-204ENST00000459639 U2SURPO15042 1029 aaKnown RBP32.33■■■□□ 2.77
U2AF1-204ENST00000459639 SALL2Q9Y467 1007 aaPredicted RBP32.32■■■□□ 2.76
U2AF1-204ENST00000459639 APAF1O14727 1248 aa32.31■■■□□ 2.76
U2AF1-204ENST00000459639 KRT28Q7Z3Y7 464 aa32.31■■■□□ 2.76
U2AF1-204ENST00000459639 SBNO1A3KN83 1393 aa32.3■■■□□ 2.76
U2AF1-204ENST00000459639 KIF24Q5T7B8 1368 aa32.3■■■□□ 2.76
U2AF1-204ENST00000459639 NUTM2GQ5VZR2 741 aa32.29■■■□□ 2.76
U2AF1-204ENST00000459639 GTF3C3Q9Y5Q9 886 aa32.29■■■□□ 2.76
U2AF1-204ENST00000459639 MAP3K19Q56UN5 1328 aa32.29■■■□□ 2.76
U2AF1-204ENST00000459639 LTN1O94822 1766 aa32.29■■■□□ 2.76
U2AF1-204ENST00000459639 NFAT5O94916 1531 aa32.29■■■□□ 2.76
U2AF1-204ENST00000459639 IL13P35225 146 aa32.28■■■□□ 2.76
U2AF1-204ENST00000459639 NPHP3Q7Z494 1330 aa32.28■■■□□ 2.76
U2AF1-204ENST00000459639 SLIT3O75094 1523 aa32.28■■■□□ 2.76
U2AF1-204ENST00000459639 ZNF521Q96K83 1311 aa32.27■■■□□ 2.76
U2AF1-204ENST00000459639 FLT4P35916 1363 aa32.27■■■□□ 2.76
U2AF1-204ENST00000459639 XPCQ01831 940 aaPredicted RBP32.27■■■□□ 2.76
U2AF1-204ENST00000459639 SOX12O15370 315 aa32.26■■■□□ 2.75
U2AF1-204ENST00000459639 PNNQ9H307 717 aaKnown RBP32.26■■■□□ 2.75
U2AF1-204ENST00000459639 PHRF1Q9P1Y6 1649 aaKnown RBP32.25■■■□□ 2.75
U2AF1-204ENST00000459639 RGPD1P0DJD0 1748 aa32.24■■■□□ 2.75
U2AF1-204ENST00000459639 PXDNQ92626 1479 aa32.24■■■□□ 2.75
U2AF1-204ENST00000459639 LTBP4Q8N2S1 1624 aa32.23■■■□□ 2.75
U2AF1-204ENST00000459639 NCBP3Q53F19 620 aaKnown RBP32.23■■■□□ 2.75
U2AF1-204ENST00000459639 RTL1A6NKG5 1358 aa32.22■■■□□ 2.75
U2AF1-204ENST00000459639 FCHSD2O94868 740 aa32.22■■■□□ 2.75
U2AF1-204ENST00000459639 PLEKHF1Q96S99 279 aa32.22■■■□□ 2.75
U2AF1-204ENST00000459639 TCP11L2Q8N4U5 519 aa32.21■■■□□ 2.75
U2AF1-204ENST00000459639 KCNH5Q8NCM2 988 aa32.21■■■□□ 2.75
U2AF1-204ENST00000459639 USP19O94966 1318 aa32.21■■■□□ 2.75
U2AF1-204ENST00000459639 BRINP3Q76B58 766 aa32.21■■■□□ 2.75
U2AF1-204ENST00000459639 SLAIN2Q9P270 581 aa32.21■■■□□ 2.75
U2AF1-204ENST00000459639 EIF4A2Q14240 407 aaKnown RBP32.19■■■□□ 2.74
U2AF1-204ENST00000459639 AMPHP49418 695 aa32.18■■■□□ 2.74
U2AF1-204ENST00000459639 RSPH6AQ9H0K4 717 aa32.18■■■□□ 2.74
U2AF1-204ENST00000459639 TNS3Q68CZ2 1445 aa32.18■■■□□ 2.74
U2AF1-204ENST00000459639 MAPK8IP3Q9UPT6 1336 aa32.18■■■□□ 2.74
U2AF1-204ENST00000459639 HSP90AB2PQ58FF8 381 aa32.18■■■□□ 2.74
U2AF1-204ENST00000459639 NHSL1Q5SYE7 1610 aa32.16■■■□□ 2.74
U2AF1-204ENST00000459639 GOLGA2Q08379 1002 aa32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms