RNA–Protein interactions for RNA: ENST00000458580.6

EXD1-202, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EXD1, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-202ENST00000458580 COL3A1P02461 1466 aaPredicted RBP8.45□□□□□ -1.06
EXD1-202ENST00000458580 PTPRMP28827 1452 aa8.45□□□□□ -1.06
EXD1-202ENST00000458580 MAPK8IP3Q9UPT6 1336 aa8.44□□□□□ -1.06
EXD1-202ENST00000458580 PREX1Q8TCU6 1659 aa8.44□□□□□ -1.06
EXD1-202ENST00000458580 HSP90AA1P07900 732 aaKnown RBP8.44□□□□□ -1.06
EXD1-202ENST00000458580 TNNT2P45379 298 aaPredicted RBP8.44□□□□□ -1.06
EXD1-202ENST00000458580 PANK1Q8TE04 598 aa8.44□□□□□ -1.06
EXD1-202ENST00000458580 ANKRD26Q9UPS8 1709 aa8.44□□□□□ -1.06
EXD1-202ENST00000458580 ZBTB22O15209 634 aa8.44□□□□□ -1.06
EXD1-202ENST00000458580 RGS3P49796 1198 aa8.44□□□□□ -1.06
EXD1-202ENST00000458580 COG6Q9Y2V7 657 aa8.44□□□□□ -1.06
EXD1-202ENST00000458580 RRP7AQ9Y3A4 280 aaKnown RBP8.44□□□□□ -1.06
EXD1-202ENST00000458580 YEATS2Q9ULM3 1422 aa8.43□□□□□ -1.06
EXD1-202ENST00000458580 NLRP1Q9C000 1473 aa8.43□□□□□ -1.06
EXD1-202ENST00000458580 A0A1W2PP64 1363 aa8.43□□□□□ -1.06
EXD1-202ENST00000458580 ATAD2Q6PL18 1390 aa8.43□□□□□ -1.06
EXD1-202ENST00000458580 CD163L1Q9NR16 1453 aa8.43□□□□□ -1.06
EXD1-202ENST00000458580 CT47B1P0C2W7 299 aaPredicted RBP8.42□□□□□ -1.06
EXD1-202ENST00000458580 MYH16Q9H6N6 1097 aa8.42□□□□□ -1.06
EXD1-202ENST00000458580 CABP2Q9NPB3 220 aa8.42□□□□□ -1.06
EXD1-202ENST00000458580 USP19O94966 1318 aa8.42□□□□□ -1.06
EXD1-202ENST00000458580 MYO5BQ9ULV0 1848 aa8.42□□□□□ -1.06
EXD1-202ENST00000458580 CANXP27824 592 aaKnown RBP8.42□□□□□ -1.06
EXD1-202ENST00000458580 NEUROD2Q15784 382 aa8.42□□□□□ -1.06
EXD1-202ENST00000458580 L1TD1Q5T7N2 865 aaKnown RBP8.42□□□□□ -1.06
EXD1-202ENST00000458580 PMFBP1Q8TBY8 1022 aa8.42□□□□□ -1.06
EXD1-202ENST00000458580 PLEKHF1Q96S99 279 aa8.42□□□□□ -1.06
EXD1-202ENST00000458580 CHMP4AQ9BY43 222 aa8.42□□□□□ -1.06
EXD1-202ENST00000458580 YTHDC2Q9H6S0 1430 aaKnown RBP8.41□□□□□ -1.06
EXD1-202ENST00000458580 RLBP1P12271 317 aa8.41□□□□□ -1.06
EXD1-202ENST00000458580 TRHP20396 242 aaPredicted RBP8.41□□□□□ -1.06
EXD1-202ENST00000458580 FGD1P98174 961 aa8.41□□□□□ -1.06
EXD1-202ENST00000458580 TAF7LQ5H9L4 462 aa8.41□□□□□ -1.06
EXD1-202ENST00000458580 NUTM2DQ5VT03 806 aaPredicted RBP8.41□□□□□ -1.06
EXD1-202ENST00000458580 U2AF1L5P0DN76 240 aaPredicted RBP8.41□□□□□ -1.06
EXD1-202ENST00000458580 HAP1P54257 671 aaPredicted RBP8.41□□□□□ -1.06
EXD1-202ENST00000458580 U2AF1Q01081 240 aaKnown RBP eCLIP8.41□□□□□ -1.06
EXD1-202ENST00000458580 CALD1Q05682 793 aaKnown RBP8.41□□□□□ -1.06
EXD1-202ENST00000458580 PCDHB15Q9Y5E8 787 aa8.41□□□□□ -1.06
EXD1-202ENST00000458580 ARHGEF40Q8TER5 1519 aa8.4□□□□□ -1.06
EXD1-202ENST00000458580 FRAT1Q92837 279 aaPredicted RBP8.4□□□□□ -1.06
EXD1-202ENST00000458580 TNNQ9UQP3 1299 aa8.4□□□□□ -1.06
EXD1-202ENST00000458580 CDC42BPGQ6DT37 1551 aa8.4□□□□□ -1.06
EXD1-202ENST00000458580 IL16Q14005 1332 aa8.4□□□□□ -1.06
EXD1-202ENST00000458580 ALKQ9UM73 1620 aa8.4□□□□□ -1.06
EXD1-202ENST00000458580 PNPLA6Q8IY17 1366 aa8.4□□□□□ -1.07
EXD1-202ENST00000458580 DLC1Q96QB1 1528 aa8.4□□□□□ -1.07
EXD1-202ENST00000458580 REREQ9P2R6 1566 aa8.39□□□□□ -1.07
EXD1-202ENST00000458580 FYB1O15117 783 aa8.39□□□□□ -1.07
EXD1-202ENST00000458580 TMPOP42166 694 aaKnown RBP8.39□□□□□ -1.07
EXD1-202ENST00000458580 SLC4A3P48751 1232 aa8.39□□□□□ -1.07
EXD1-202ENST00000458580 NFKBIBQ15653 356 aa8.39□□□□□ -1.07
EXD1-202ENST00000458580 TERF2IPQ9NYB0 399 aa8.39□□□□□ -1.07
EXD1-202ENST00000458580 TRIM35Q9UPQ4 493 aa8.39□□□□□ -1.07
EXD1-202ENST00000458580 AGLP35573 1532 aa8.39□□□□□ -1.07
EXD1-202ENST00000458580 SRPK2P78362 688 aaKnown RBP8.38□□□□□ -1.07
EXD1-202ENST00000458580 MVPQ14764 893 aaKnown RBP8.38□□□□□ -1.07
EXD1-202ENST00000458580 STK26Q9P289 416 aa8.38□□□□□ -1.07
EXD1-202ENST00000458580 ZKSCAN2Q63HK3 967 aa8.38□□□□□ -1.07
EXD1-202ENST00000458580 PRAM1Q96QH2 718 aa8.38□□□□□ -1.07
EXD1-202ENST00000458580 GGNBP2Q9H3C7 697 aa8.38□□□□□ -1.07
EXD1-202ENST00000458580 RWDD1Q9H446 243 aaPredicted RBP8.38□□□□□ -1.07
EXD1-202ENST00000458580 PDZRN3Q9UPQ7 1066 aa8.38□□□□□ -1.07
EXD1-202ENST00000458580 CLCN1P35523 988 aa8.37□□□□□ -1.07
EXD1-202ENST00000458580 SAFB2Q14151 953 aaKnown RBP eCLIP8.37□□□□□ -1.07
EXD1-202ENST00000458580 KIF20BQ96Q89 1820 aa8.37□□□□□ -1.07
EXD1-202ENST00000458580 BCL2L13Q9BXK5 485 aa8.37□□□□□ -1.07
EXD1-202ENST00000458580 MINK1Q8N4C8 1332 aaPredicted RBP8.37□□□□□ -1.07
EXD1-202ENST00000458580 SEC24BO95487 1268 aa8.37□□□□□ -1.07
EXD1-202ENST00000458580 RBM10P98175 930 aaKnown RBP8.37□□□□□ -1.07
EXD1-202ENST00000458580 DZIP1LQ8IYY4 767 aaKnown RBP8.37□□□□□ -1.07
EXD1-202ENST00000458580 PNNQ9H307 717 aaKnown RBP8.37□□□□□ -1.07
EXD1-202ENST00000458580 SETD1AO15047 1707 aaKnown RBP8.36□□□□□ -1.07
EXD1-202ENST00000458580 ATP7BP35670 1465 aa8.36□□□□□ -1.07
EXD1-202ENST00000458580 TPM2P07951 284 aa8.36□□□□□ -1.07
EXD1-202ENST00000458580 EXOSC9Q06265 439 aaKnown RBP8.36□□□□□ -1.07
EXD1-202ENST00000458580 HDGFL2Q7Z4V5 671 aaPredicted RBP8.36□□□□□ -1.07
EXD1-202ENST00000458580 PDCL3Q9H2J4 239 aa8.36□□□□□ -1.07
EXD1-202ENST00000458580 POGKQ9P215 609 aa8.36□□□□□ -1.07
EXD1-202ENST00000458580 SPATA31D1Q6ZQQ2 1576 aa8.36□□□□□ -1.07
EXD1-202ENST00000458580 DCAF8L1A6NGE4 600 aa8.35□□□□□ -1.07
EXD1-202ENST00000458580 NCLP19338 710 aaKnown RBP8.35□□□□□ -1.07
EXD1-202ENST00000458580 BRD2P25440 801 aaKnown RBP8.35□□□□□ -1.07
EXD1-202ENST00000458580 TSR2Q969E8 191 aaKnown RBP8.35□□□□□ -1.07
EXD1-202ENST00000458580 CDK19Q9BWU1 502 aa8.35□□□□□ -1.07
EXD1-202ENST00000458580 BCL11BQ9C0K0 894 aaPredicted RBP8.35□□□□□ -1.07
EXD1-202ENST00000458580 A2ML1A8K2U0 1454 aa8.35□□□□□ -1.07
EXD1-202ENST00000458580 U2SURPO15042 1029 aaKnown RBP8.35□□□□□ -1.07
EXD1-202ENST00000458580 DIAPH1O60610 1272 aaKnown RBP8.35□□□□□ -1.07
EXD1-202ENST00000458580 HDAC1Q13547 482 aaPredicted RBP8.35□□□□□ -1.07
EXD1-202ENST00000458580 FBXO31Q5XUX0 539 aaPredicted RBP8.35□□□□□ -1.07
EXD1-202ENST00000458580 SSH1Q8WYL5 1049 aa8.35□□□□□ -1.07
EXD1-202ENST00000458580 FAM135BQ49AJ0 1406 aa8.34□□□□□ -1.07
EXD1-202ENST00000458580 TRIM27P14373 513 aa8.34□□□□□ -1.07
EXD1-202ENST00000458580 SAMD1Q6SPF0 538 aaPredicted RBP8.34□□□□□ -1.07
EXD1-202ENST00000458580 TBC1D32Q96NH3 1257 aa8.34□□□□□ -1.07
EXD1-202ENST00000458580 SMC4Q9NTJ3 1288 aa8.34□□□□□ -1.07
EXD1-202ENST00000458580 LRRC7Q96NW7 1537 aa8.34□□□□□ -1.07
EXD1-202ENST00000458580 PPIP5K1Q6PFW1 1433 aa8.34□□□□□ -1.07
EXD1-202ENST00000458580 FCHSD2O94868 740 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms