RNA–Protein interactions for RNA: ENST00000458304.2

SPARCL1-204, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-204ENST00000458304 SLC19A1P41440 591 aa7.12□□□□□ -1.27
SPARCL1-204ENST00000458304 POLR3GLQ9BT43 218 aa7.12□□□□□ -1.27
SPARCL1-204ENST00000458304 PRDM9Q9NQV7 894 aa7.12□□□□□ -1.27
SPARCL1-204ENST00000458304 BRD2P25440 801 aaKnown RBP7.11□□□□□ -1.27
SPARCL1-204ENST00000458304 GUCA2AQ02747 115 aa7.11□□□□□ -1.27
SPARCL1-204ENST00000458304 TTLL12Q14166 644 aaPredicted RBP7.11□□□□□ -1.27
SPARCL1-204ENST00000458304 SPRYD7Q5W111 196 aa7.11□□□□□ -1.27
SPARCL1-204ENST00000458304 GIGYF2Q6Y7W6 1299 aaKnown RBP7.11□□□□□ -1.27
SPARCL1-204ENST00000458304 CCDC125Q86Z20 511 aa7.11□□□□□ -1.27
SPARCL1-204ENST00000458304 GFRA3O60609 400 aa7.1□□□□□ -1.27
SPARCL1-204ENST00000458304 LAPTM4AQ15012 233 aa7.1□□□□□ -1.27
SPARCL1-204ENST00000458304 Q3C1V9 767 aa7.1□□□□□ -1.27
SPARCL1-204ENST00000458304 TRIM67Q6ZTA4 783 aa7.1□□□□□ -1.27
SPARCL1-204ENST00000458304 PPM1GO15355 546 aaPredicted RBP7.09□□□□□ -1.27
SPARCL1-204ENST00000458304 CANXP27824 592 aaKnown RBP7.09□□□□□ -1.27
SPARCL1-204ENST00000458304 SPIRE2Q8WWL2 714 aa7.09□□□□□ -1.27
SPARCL1-204ENST00000458304 FCF1Q9Y324 198 aaKnown RBP7.09□□□□□ -1.27
SPARCL1-204ENST00000458304 PRDM2Q13029 1718 aa7.09□□□□□ -1.27
SPARCL1-204ENST00000458304 LCE2BO14633 110 aa7.08□□□□□ -1.28
SPARCL1-204ENST00000458304 MS4A1P11836 297 aa7.08□□□□□ -1.28
SPARCL1-204ENST00000458304 MMP16P51512 607 aa7.08□□□□□ -1.28
SPARCL1-204ENST00000458304 ZNF598Q86UK7 904 aaKnown RBP7.08□□□□□ -1.28
SPARCL1-204ENST00000458304 NUTM1Q86Y26 1132 aa7.08□□□□□ -1.28
SPARCL1-204ENST00000458304 ZNF330Q9Y3S2 320 aaPredicted RBP7.08□□□□□ -1.28
SPARCL1-204ENST00000458304 NRG2O14511 850 aaPredicted RBP7.07□□□□□ -1.28
SPARCL1-204ENST00000458304 DHX37Q8IY37 1157 aaKnown RBP7.07□□□□□ -1.28
SPARCL1-204ENST00000458304 USB1Q9BQ65 265 aaKnown RBP7.07□□□□□ -1.28
SPARCL1-204ENST00000458304 PCDHGC3Q9UN70 934 aa7.07□□□□□ -1.28
SPARCL1-204ENST00000458304 DXOO77932 396 aaKnown RBP7.06□□□□□ -1.28
SPARCL1-204ENST00000458304 SH3D19Q5HYK7 790 aa7.06□□□□□ -1.28
SPARCL1-204ENST00000458304 ZNF697Q5TEC3 545 aa7.06□□□□□ -1.28
SPARCL1-204ENST00000458304 SND1Q7KZF4 910 aaKnown RBP eCLIP7.06□□□□□ -1.28
SPARCL1-204ENST00000458304 SYMPKQ92797 1274 aaKnown RBP7.06□□□□□ -1.28
SPARCL1-204ENST00000458304 BEGAINQ9BUH8 593 aa7.06□□□□□ -1.28
SPARCL1-204ENST00000458304 IGSF5Q9NSI5 407 aa7.06□□□□□ -1.28
SPARCL1-204ENST00000458304 PDZRN3Q9UPQ7 1066 aa7.06□□□□□ -1.28
SPARCL1-204ENST00000458304 USTQ9Y2C2 406 aa7.06□□□□□ -1.28
SPARCL1-204ENST00000458304 MOXD2PA6NHM9 499 aa7.05□□□□□ -1.28
SPARCL1-204ENST00000458304 GDF9O60383 454 aa7.05□□□□□ -1.28
SPARCL1-204ENST00000458304 FDX1P10109 184 aa7.05□□□□□ -1.28
SPARCL1-204ENST00000458304 NDUFV2P19404 249 aa7.05□□□□□ -1.28
SPARCL1-204ENST00000458304 RPIAP49247 311 aa7.05□□□□□ -1.28
SPARCL1-204ENST00000458304 Q6ZNB5 142 aa7.05□□□□□ -1.28
SPARCL1-204ENST00000458304 COG6Q9Y2V7 657 aa7.05□□□□□ -1.28
SPARCL1-204ENST00000458304 UNCXA6NJT0 531 aa7.04□□□□□ -1.28
SPARCL1-204ENST00000458304 PRR20EP86478 221 aa7.04□□□□□ -1.28
SPARCL1-204ENST00000458304 PRR20CP86479 221 aa7.04□□□□□ -1.28
SPARCL1-204ENST00000458304 PRR20DP86480 221 aa7.04□□□□□ -1.28
SPARCL1-204ENST00000458304 PRR20BP86481 221 aa7.04□□□□□ -1.28
SPARCL1-204ENST00000458304 PRR20AP86496 221 aa7.04□□□□□ -1.28
SPARCL1-204ENST00000458304 EEA1Q15075 1411 aa7.03□□□□□ -1.28
SPARCL1-204ENST00000458304 SPDYE5A6NIY4 337 aa7.03□□□□□ -1.28
SPARCL1-204ENST00000458304 RETREG3Q86VR2 466 aa7.03□□□□□ -1.28
SPARCL1-204ENST00000458304 TBC1D2Q9BYX2 928 aa7.03□□□□□ -1.28
SPARCL1-204ENST00000458304 PKD2L1Q9P0L9 805 aa7.02□□□□□ -1.29
SPARCL1-204ENST00000458304 WRNQ14191 1432 aaPredicted RBP eCLIP7.01□□□□□ -1.29
SPARCL1-204ENST00000458304 LAMC3Q9Y6N6 1575 aa7.01□□□□□ -1.29
SPARCL1-204ENST00000458304 CFTRP13569 1480 aa7.01□□□□□ -1.29
SPARCL1-204ENST00000458304 CADPSQ9ULU8 1353 aa7.01□□□□□ -1.29
SPARCL1-204ENST00000458304 JUNDP17535 347 aa7.01□□□□□ -1.29
SPARCL1-204ENST00000458304 GJA5P36382 358 aa7.01□□□□□ -1.29
SPARCL1-204ENST00000458304 RSBN1LQ6PCB5 846 aaPredicted RBP7.01□□□□□ -1.29
SPARCL1-204ENST00000458304 CALR3Q96L12 384 aaKnown RBP7.01□□□□□ -1.29
SPARCL1-204ENST00000458304 IVNS1ABPQ9Y6Y0 642 aa7.01□□□□□ -1.29
SPARCL1-204ENST00000458304 RBM47A0AV96 593 aaKnown RBP7□□□□□ -1.29
SPARCL1-204ENST00000458304 CSB-PGBD3P0DP91 1061 aa7□□□□□ -1.29
SPARCL1-204ENST00000458304 TRAF7Q6Q0C0 670 aa7□□□□□ -1.29
SPARCL1-204ENST00000458304 PBXIP1Q96AQ6 731 aa7□□□□□ -1.29
SPARCL1-204ENST00000458304 ABCC8Q09428 1581 aa6.99□□□□□ -1.29
SPARCL1-204ENST00000458304 C6orf229H3BNL8 230 aa6.99□□□□□ -1.29
SPARCL1-204ENST00000458304 TNFRSF10AO00220 468 aa6.99□□□□□ -1.29
SPARCL1-204ENST00000458304 SPTLC1O15269 473 aa6.99□□□□□ -1.29
SPARCL1-204ENST00000458304 CD2BP2O95400 341 aaKnown RBP6.99□□□□□ -1.29
SPARCL1-204ENST00000458304 SKIV2LQ15477 1246 aaKnown RBP6.99□□□□□ -1.29
SPARCL1-204ENST00000458304 DIXDC1Q155Q3 683 aa6.99□□□□□ -1.29
SPARCL1-204ENST00000458304 PDS5BQ9NTI5 1447 aa6.99□□□□□ -1.29
SPARCL1-204ENST00000458304 CWC22Q9HCG8 908 aaKnown RBP6.98□□□□□ -1.29
SPARCL1-204ENST00000458304 PCDHB15Q9Y5E8 787 aa6.98□□□□□ -1.29
SPARCL1-204ENST00000458304 ZBTB24O43167 697 aaPredicted RBP6.97□□□□□ -1.29
SPARCL1-204ENST00000458304 TRIM32Q13049 653 aa6.97□□□□□ -1.29
SPARCL1-204ENST00000458304 MTMR2Q13614 643 aa6.97□□□□□ -1.29
SPARCL1-204ENST00000458304 WWC1Q8IX03 1113 aa6.97□□□□□ -1.29
SPARCL1-204ENST00000458304 UBE2Q2Q8WVN8 375 aa6.97□□□□□ -1.29
SPARCL1-204ENST00000458304 FOXC1Q12948 553 aa6.96□□□□□ -1.3
SPARCL1-204ENST00000458304 MYSM1Q5VVJ2 828 aa6.96□□□□□ -1.3
SPARCL1-204ENST00000458304 RIC3Q7Z5B4 369 aa6.96□□□□□ -1.3
SPARCL1-204ENST00000458304 NUDT12Q9BQG2 462 aa6.96□□□□□ -1.3
SPARCL1-204ENST00000458304 TOP2BQ02880 1626 aa6.95□□□□□ -1.3
SPARCL1-204ENST00000458304 DGAT1O75907 488 aa6.95□□□□□ -1.3
SPARCL1-204ENST00000458304 DESI1Q6ICB0 168 aa6.95□□□□□ -1.3
SPARCL1-204ENST00000458304 PTCRAQ6ISU1 281 aaPredicted RBP6.95□□□□□ -1.3
SPARCL1-204ENST00000458304 FAM9AQ8IZU1 332 aaPredicted RBP6.95□□□□□ -1.3
SPARCL1-204ENST00000458304 CCDC24Q8N4L8 307 aa6.95□□□□□ -1.3
SPARCL1-204ENST00000458304 BANK1Q8NDB2 785 aa6.95□□□□□ -1.3
SPARCL1-204ENST00000458304 PRR7Q8TB68 274 aa6.95□□□□□ -1.3
SPARCL1-204ENST00000458304 GLMNQ92990 594 aa6.95□□□□□ -1.3
SPARCL1-204ENST00000458304 SPATA32Q96LK8 384 aa6.95□□□□□ -1.3
SPARCL1-204ENST00000458304 TOR4AQ9NXH8 423 aa6.95□□□□□ -1.3
SPARCL1-204ENST00000458304 LIMD1Q9UGP4 676 aa6.95□□□□□ -1.3
SPARCL1-204ENST00000458304 ATP1B4Q9UN42 357 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms