RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 NRXN1Q9ULB1 1477 aa21.31■■□□□ 1
UPF3AP2-201ENST00000457924 CFAP70Q5T0N1 1121 aa21.3■■□□□ 1
UPF3AP2-201ENST00000457924 ABCA3Q99758 1704 aa21.29■■□□□ 1
UPF3AP2-201ENST00000457924 SAFB2Q14151 953 aaKnown RBP eCLIP21.29■■□□□ 1
UPF3AP2-201ENST00000457924 PRAM1Q96QH2 718 aa21.29■■□□□ 1
UPF3AP2-201ENST00000457924 ONECUT3O60422 494 aaPredicted RBP21.28■■□□□ 1
UPF3AP2-201ENST00000457924 KRT27Q7Z3Y8 459 aa21.27■■□□□ 1
UPF3AP2-201ENST00000457924 POGKQ9P215 609 aa21.27■■□□□ 1
UPF3AP2-201ENST00000457924 ACIN1Q9UKV3 1341 aaKnown RBP21.27■□□□□ 0.99
UPF3AP2-201ENST00000457924 FAM83GA6ND36 823 aa21.25■□□□□ 0.99
UPF3AP2-201ENST00000457924 ANKARQ7Z5J8 1434 aa21.25■□□□□ 0.99
UPF3AP2-201ENST00000457924 PMFBP1Q8TBY8 1022 aa21.25■□□□□ 0.99
UPF3AP2-201ENST00000457924 A0A0G2JS52 829 aa21.24■□□□□ 0.99
UPF3AP2-201ENST00000457924 MYT1Q01538 1121 aa21.24■□□□□ 0.99
UPF3AP2-201ENST00000457924 DLC1Q96QB1 1528 aa21.24■□□□□ 0.99
UPF3AP2-201ENST00000457924 ADGRB2O60241 1585 aa21.21■□□□□ 0.99
UPF3AP2-201ENST00000457924 NRAPQ86VF7 1730 aa21.21■□□□□ 0.99
UPF3AP2-201ENST00000457924 BAG6P46379 1132 aa21.2■□□□□ 0.98
UPF3AP2-201ENST00000457924 GPRASP1Q5JY77 1395 aa21.2■□□□□ 0.98
UPF3AP2-201ENST00000457924 TRPM3Q9HCF6 1732 aaPredicted RBP21.19■□□□□ 0.98
UPF3AP2-201ENST00000457924 FAM98CQ17RN3 349 aaKnown RBP21.19■□□□□ 0.98
UPF3AP2-201ENST00000457924 BTG4Q9NY30 223 aa21.19■□□□□ 0.98
UPF3AP2-201ENST00000457924 LRP5O75197 1615 aa21.18■□□□□ 0.98
UPF3AP2-201ENST00000457924 COL14A1Q05707 1796 aaKnown RBP21.18■□□□□ 0.98
UPF3AP2-201ENST00000457924 EIF3AQ14152 1382 aaKnown RBP21.18■□□□□ 0.98
UPF3AP2-201ENST00000457924 HIRIP3Q9BW71 556 aaPredicted RBP21.17■□□□□ 0.98
UPF3AP2-201ENST00000457924 ALS2Q96Q42 1657 aa21.17■□□□□ 0.98
UPF3AP2-201ENST00000457924 TRAK1Q9UPV9 953 aa21.16■□□□□ 0.98
UPF3AP2-201ENST00000457924 ADGRB1O14514 1584 aa21.15■□□□□ 0.98
UPF3AP2-201ENST00000457924 MINK1Q8N4C8 1332 aaPredicted RBP21.15■□□□□ 0.98
UPF3AP2-201ENST00000457924 PSDA5PKW4 1024 aaPredicted RBP21.14■□□□□ 0.97
UPF3AP2-201ENST00000457924 TULP4Q9NRJ4 1543 aa21.14■□□□□ 0.97
UPF3AP2-201ENST00000457924 RGPD1P0DJD0 1748 aa21.13■□□□□ 0.97
UPF3AP2-201ENST00000457924 PRR36Q9H6K5 1346 aa21.12■□□□□ 0.97
UPF3AP2-201ENST00000457924 NGDNQ8NEJ9 315 aaKnown RBP21.12■□□□□ 0.97
UPF3AP2-201ENST00000457924 SPATA31A5Q5VU36 1347 aa21.11■□□□□ 0.97
UPF3AP2-201ENST00000457924 SPATA31A7Q8IWB4 1347 aa21.11■□□□□ 0.97
UPF3AP2-201ENST00000457924 WASLO00401 505 aaPredicted RBP21.11■□□□□ 0.97
UPF3AP2-201ENST00000457924 PAK3O75914 559 aaPredicted RBP21.11■□□□□ 0.97
UPF3AP2-201ENST00000457924 HRCP23327 699 aa21.1■□□□□ 0.97
UPF3AP2-201ENST00000457924 EN1Q05925 392 aaPredicted RBP21.1■□□□□ 0.97
UPF3AP2-201ENST00000457924 KDM2AQ9Y2K7 1162 aa21.1■□□□□ 0.97
UPF3AP2-201ENST00000457924 CRYBG1Q9Y4K1 1723 aa21.09■□□□□ 0.97
UPF3AP2-201ENST00000457924 PRDM11Q9NQV5 511 aa21.09■□□□□ 0.97
UPF3AP2-201ENST00000457924 FAM182BQ5T319 152 aa21.08■□□□□ 0.97
UPF3AP2-201ENST00000457924 DCAF11Q8TEB1 546 aa21.08■□□□□ 0.97
UPF3AP2-201ENST00000457924 THSD7AQ9UPZ6 1657 aa21.07■□□□□ 0.96
UPF3AP2-201ENST00000457924 ITSN1Q15811 1721 aa21.07■□□□□ 0.96
UPF3AP2-201ENST00000457924 RAB3GAP2Q9H2M9 1393 aa21.06■□□□□ 0.96
UPF3AP2-201ENST00000457924 STAC3Q96MF2 364 aa21.05■□□□□ 0.96
UPF3AP2-201ENST00000457924 TNS1Q9HBL0 1735 aaKnown RBP21.04■□□□□ 0.96
UPF3AP2-201ENST00000457924 DISP2A7MBM2 1401 aa21.04■□□□□ 0.96
UPF3AP2-201ENST00000457924 R3HDM1Q15032 1099 aaKnown RBP21.03■□□□□ 0.96
UPF3AP2-201ENST00000457924 SPATA31A1Q5TZJ5 1347 aa21.03■□□□□ 0.96
UPF3AP2-201ENST00000457924 KIAA0232Q92628 1395 aa21.02■□□□□ 0.96
UPF3AP2-201ENST00000457924 NUDT16Q96DE0 195 aaKnown RBP21.02■□□□□ 0.96
UPF3AP2-201ENST00000457924 ARHGEF28Q8N1W1 1705 aaKnown RBP21.01■□□□□ 0.95
UPF3AP2-201ENST00000457924 FAM196AQ6ZSG2 479 aa21.01■□□□□ 0.95
UPF3AP2-201ENST00000457924 STRN4Q9NRL3 753 aa21.01■□□□□ 0.95
UPF3AP2-201ENST00000457924 ATP7BP35670 1465 aa21.01■□□□□ 0.95
UPF3AP2-201ENST00000457924 PHRF1Q9P1Y6 1649 aaKnown RBP21■□□□□ 0.95
UPF3AP2-201ENST00000457924 CHRNA2Q15822 529 aa21■□□□□ 0.95
UPF3AP2-201ENST00000457924 EZH2Q15910 746 aaKnown RBP21■□□□□ 0.95
UPF3AP2-201ENST00000457924 TRIM37O94972 964 aa20.98■□□□□ 0.95
UPF3AP2-201ENST00000457924 ZC3H6P61129 1189 aaKnown RBP20.98■□□□□ 0.95
UPF3AP2-201ENST00000457924 EVA1CP58658 441 aa20.97■□□□□ 0.95
UPF3AP2-201ENST00000457924 NUTM2GQ5VZR2 741 aa20.97■□□□□ 0.95
UPF3AP2-201ENST00000457924 CAMKK2Q96RR4 588 aa20.96■□□□□ 0.95
UPF3AP2-201ENST00000457924 CDK19Q9BWU1 502 aa20.96■□□□□ 0.95
UPF3AP2-201ENST00000457924 USP35Q9P2H5 1018 aa20.96■□□□□ 0.95
UPF3AP2-201ENST00000457924 APBA3O96018 575 aa20.95■□□□□ 0.94
UPF3AP2-201ENST00000457924 PDE3BQ13370 1112 aa20.94■□□□□ 0.94
UPF3AP2-201ENST00000457924 BARGINQ6ZT62 677 aa20.94■□□□□ 0.94
UPF3AP2-201ENST00000457924 ACEP12821 1306 aa20.94■□□□□ 0.94
UPF3AP2-201ENST00000457924 POLR3AO14802 1390 aaPredicted RBP20.94■□□□□ 0.94
UPF3AP2-201ENST00000457924 PARD3Q8TEW0 1356 aa20.94■□□□□ 0.94
UPF3AP2-201ENST00000457924 TOPAZ1Q8N9V7 1692 aa20.93■□□□□ 0.94
UPF3AP2-201ENST00000457924 NBPF8Q3BBV2 869 aa20.93■□□□□ 0.94
UPF3AP2-201ENST00000457924 CCDC61Q9Y6R9 512 aa20.93■□□□□ 0.94
UPF3AP2-201ENST00000457924 SSH2Q76I76 1423 aa20.93■□□□□ 0.94
UPF3AP2-201ENST00000457924 ABTB2Q8N961 1025 aa20.91■□□□□ 0.94
UPF3AP2-201ENST00000457924 NRKQ7Z2Y5 1582 aa20.9■□□□□ 0.94
UPF3AP2-201ENST00000457924 PLEKHG3A1L390 1219 aa20.9■□□□□ 0.94
UPF3AP2-201ENST00000457924 LARP1Q6PKG0 1096 aaKnown RBP20.89■□□□□ 0.93
UPF3AP2-201ENST00000457924 TCP11L2Q8N4U5 519 aa20.89■□□□□ 0.93
UPF3AP2-201ENST00000457924 RREB1Q92766 1687 aa20.89■□□□□ 0.93
UPF3AP2-201ENST00000457924 CAMTA1Q9Y6Y1 1673 aa20.89■□□□□ 0.93
UPF3AP2-201ENST00000457924 CPDO75976 1380 aa20.88■□□□□ 0.93
UPF3AP2-201ENST00000457924 NBPF14Q5TI25 921 aa20.88■□□□□ 0.93
UPF3AP2-201ENST00000457924 KIAA1210Q9ULL0 1709 aa20.87■□□□□ 0.93
UPF3AP2-201ENST00000457924 THRAP3Q9Y2W1 955 aaKnown RBP20.87■□□□□ 0.93
UPF3AP2-201ENST00000457924 LMO7Q8WWI1 1683 aa20.86■□□□□ 0.93
UPF3AP2-201ENST00000457924 NLRP13Q86W25 1043 aa20.86■□□□□ 0.93
UPF3AP2-201ENST00000457924 NUP188Q5SRE5 1749 aa20.86■□□□□ 0.93
UPF3AP2-201ENST00000457924 USP19O94966 1318 aa20.85■□□□□ 0.93
UPF3AP2-201ENST00000457924 GCP02774 474 aa20.83■□□□□ 0.93
UPF3AP2-201ENST00000457924 SRPK2P78362 688 aaKnown RBP20.83■□□□□ 0.93
UPF3AP2-201ENST00000457924 PARP4Q9UKK3 1724 aaKnown RBP20.82■□□□□ 0.92
UPF3AP2-201ENST00000457924 PPIP5K1Q6PFW1 1433 aa20.82■□□□□ 0.92
UPF3AP2-201ENST00000457924 SPDYE2BA6NHP3 402 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms