RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 HPS1Q92902 700 aa6.59□□□□□ -1.35
HMGB3P30-201ENST00000457863 ATP13A2Q9NQ11 1180 aa6.59□□□□□ -1.35
HMGB3P30-201ENST00000457863 LYPD8Q6UX82 237 aa6.58□□□□□ -1.36
HMGB3P30-201ENST00000457863 PCDHB15Q9Y5E8 787 aa6.58□□□□□ -1.36
HMGB3P30-201ENST00000457863 C11orf95C9JLR9 678 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P30-201ENST00000457863 CFAP99D6REC4 459 aa6.57□□□□□ -1.36
HMGB3P30-201ENST00000457863 ALDH1A1P00352 501 aa6.57□□□□□ -1.36
HMGB3P30-201ENST00000457863 F12P00748 615 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P30-201ENST00000457863 LCE2AQ5TA79 106 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P30-201ENST00000457863 ZNF511Q8NB15 262 aa6.57□□□□□ -1.36
HMGB3P30-201ENST00000457863 MYSM1Q5VVJ2 828 aa6.56□□□□□ -1.36
HMGB3P30-201ENST00000457863 RIC3Q7Z5B4 369 aa6.56□□□□□ -1.36
HMGB3P30-201ENST00000457863 MPNDQ8N594 471 aa6.56□□□□□ -1.36
HMGB3P30-201ENST00000457863 TRIM47Q96LD4 638 aa6.56□□□□□ -1.36
HMGB3P30-201ENST00000457863 SENP2Q9HC62 589 aa6.56□□□□□ -1.36
HMGB3P30-201ENST00000457863 LINC01559Q495D7 138 aa6.55□□□□□ -1.36
HMGB3P30-201ENST00000457863 TREML4Q6UXN2 200 aa6.55□□□□□ -1.36
HMGB3P30-201ENST00000457863 VARSP26640 1264 aaKnown RBP6.54□□□□□ -1.36
HMGB3P30-201ENST00000457863 CABLES1Q8TDN4 633 aa6.54□□□□□ -1.36
HMGB3P30-201ENST00000457863 BAP1Q92560 729 aa6.54□□□□□ -1.36
HMGB3P30-201ENST00000457863 KIFC2Q96AC6 838 aa6.54□□□□□ -1.36
HMGB3P30-201ENST00000457863 SLC24A3Q9HC58 644 aa6.54□□□□□ -1.36
HMGB3P30-201ENST00000457863 LIMD1Q9UGP4 676 aa6.54□□□□□ -1.36
HMGB3P30-201ENST00000457863 EIF5BO60841 1220 aaKnown RBP6.53□□□□□ -1.36
HMGB3P30-201ENST00000457863 MAP10Q9P2G4 905 aa6.53□□□□□ -1.36
HMGB3P30-201ENST00000457863 TLL2Q9Y6L7 1015 aa6.53□□□□□ -1.36
HMGB3P30-201ENST00000457863 WASF2Q9Y6W5 498 aa6.53□□□□□ -1.36
HMGB3P30-201ENST00000457863 PLEKHG3A1L390 1219 aa6.52□□□□□ -1.37
HMGB3P30-201ENST00000457863 LILRB3O75022 631 aa6.52□□□□□ -1.37
HMGB3P30-201ENST00000457863 CTHP32929 405 aa6.52□□□□□ -1.37
HMGB3P30-201ENST00000457863 QPCTQ16769 361 aa6.52□□□□□ -1.37
HMGB3P30-201ENST00000457863 SNRPBP14678 240 aaKnown RBP6.51□□□□□ -1.37
HMGB3P30-201ENST00000457863 CLK2P49760 499 aaKnown RBP6.51□□□□□ -1.37
HMGB3P30-201ENST00000457863 NFX1Q12986 1120 aaKnown RBP6.51□□□□□ -1.37
HMGB3P30-201ENST00000457863 CAPN5O15484 640 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P30-201ENST00000457863 PER1O15534 1290 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P30-201ENST00000457863 CSPP1Q1MSJ5 1256 aa6.5□□□□□ -1.37
HMGB3P30-201ENST00000457863 HELBQ8NG08 1087 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P30-201ENST00000457863 FAM174AQ8TBP5 190 aa6.5□□□□□ -1.37
HMGB3P30-201ENST00000457863 CDK15Q96Q40 435 aa6.5□□□□□ -1.37
HMGB3P30-201ENST00000457863 RSPH6AQ9H0K4 717 aa6.5□□□□□ -1.37
HMGB3P30-201ENST00000457863 WFS1O76024 890 aa6.49□□□□□ -1.37
HMGB3P30-201ENST00000457863 ADH1CP00326 375 aa6.49□□□□□ -1.37
HMGB3P30-201ENST00000457863 NNTQ13423 1086 aa6.49□□□□□ -1.37
HMGB3P30-201ENST00000457863 TRIM46Q7Z4K8 759 aa6.49□□□□□ -1.37
HMGB3P30-201ENST00000457863 NUTM2BA6NNL0 878 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P30-201ENST00000457863 NUTM2EB1AL46 878 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P30-201ENST00000457863 BMP1P13497 986 aa6.48□□□□□ -1.37
HMGB3P30-201ENST00000457863 NUTM2DQ5VT03 806 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P30-201ENST00000457863 NUTM2AQ8IVF1 878 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P30-201ENST00000457863 FOXJ1Q92949 421 aa6.48□□□□□ -1.37
HMGB3P30-201ENST00000457863 C1QTNF2Q9BXJ5 285 aa6.48□□□□□ -1.37
HMGB3P30-201ENST00000457863 LOC105371045A0A1W2PR82 267 aa6.47□□□□□ -1.37
HMGB3P30-201ENST00000457863 WIPF1O43516 503 aa6.47□□□□□ -1.37
HMGB3P30-201ENST00000457863 TIMP2P16035 220 aa6.47□□□□□ -1.37
HMGB3P30-201ENST00000457863 C4orf48Q5BLP8 95 aa6.47□□□□□ -1.37
HMGB3P30-201ENST00000457863 NBPF14Q5TI25 921 aa6.47□□□□□ -1.37
HMGB3P30-201ENST00000457863 SH3RF1Q7Z6J0 888 aa6.47□□□□□ -1.37
HMGB3P30-201ENST00000457863 BPHLQ86WA6 291 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P30-201ENST00000457863 ARMC2Q8NEN0 867 aa6.47□□□□□ -1.37
HMGB3P30-201ENST00000457863 TERTO14746 1132 aaKnown RBP6.46□□□□□ -1.38
HMGB3P30-201ENST00000457863 RTL5Q5HYW3 569 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P30-201ENST00000457863 TSC1Q92574 1164 aa6.46□□□□□ -1.38
HMGB3P30-201ENST00000457863 KLF16Q9BXK1 252 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P30-201ENST00000457863 NR5A1Q13285 461 aa6.45□□□□□ -1.38
HMGB3P30-201ENST00000457863 SH3D19Q5HYK7 790 aa6.45□□□□□ -1.38
HMGB3P30-201ENST00000457863 LCE2CQ5TA81 110 aa6.45□□□□□ -1.38
HMGB3P30-201ENST00000457863 SH3BP5LQ7L8J4 393 aa6.45□□□□□ -1.38
HMGB3P30-201ENST00000457863 TRMT44Q8IYL2 757 aaKnown RBP6.45□□□□□ -1.38
HMGB3P30-201ENST00000457863 GPKOWQ92917 476 aaPredicted RBP eCLIP6.45□□□□□ -1.38
HMGB3P30-201ENST00000457863 MAP4K5Q9Y4K4 846 aa6.45□□□□□ -1.38
HMGB3P30-201ENST00000457863 WDR4P57081 412 aaKnown RBP6.44□□□□□ -1.38
HMGB3P30-201ENST00000457863 NPAS3Q8IXF0 933 aa6.44□□□□□ -1.38
HMGB3P30-201ENST00000457863 DDRGK1Q96HY6 314 aa6.44□□□□□ -1.38
HMGB3P30-201ENST00000457863 MRPL14Q6P1L8 145 aaKnown RBP6.43□□□□□ -1.38
HMGB3P30-201ENST00000457863 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.43□□□□□ -1.38
HMGB3P30-201ENST00000457863 KDM4CQ9H3R0 1056 aa6.43□□□□□ -1.38
HMGB3P30-201ENST00000457863 POLR3EQ9NVU0 708 aa6.43□□□□□ -1.38
HMGB3P30-201ENST00000457863 NR3C2P08235 984 aa6.42□□□□□ -1.38
HMGB3P30-201ENST00000457863 GRM5P41594 1212 aa6.42□□□□□ -1.38
HMGB3P30-201ENST00000457863 SCARF1Q14162 830 aa6.42□□□□□ -1.38
HMGB3P30-201ENST00000457863 AGERQ15109 404 aa6.42□□□□□ -1.38
HMGB3P30-201ENST00000457863 SKIV2LQ15477 1246 aaKnown RBP6.42□□□□□ -1.38
HMGB3P30-201ENST00000457863 PPP2R2DQ66LE6 453 aa6.42□□□□□ -1.38
HMGB3P30-201ENST00000457863 ZFP42Q96MM3 310 aa6.42□□□□□ -1.38
HMGB3P30-201ENST00000457863 NXF1Q9UBU9 619 aaKnown RBP6.42□□□□□ -1.38
HMGB3P30-201ENST00000457863 ARID5BQ14865 1188 aa6.41□□□□□ -1.38
HMGB3P30-201ENST00000457863 GPBP1L1Q9HC44 474 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P30-201ENST00000457863 ZC3H4Q9UPT8 1303 aaKnown RBP6.41□□□□□ -1.38
HMGB3P30-201ENST00000457863 SHROOM4Q9ULL8 1493 aa6.41□□□□□ -1.38
HMGB3P30-201ENST00000457863 ZIC2O95409 532 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P30-201ENST00000457863 FSHRP23945 695 aa6.4□□□□□ -1.38
HMGB3P30-201ENST00000457863 INSM1Q01101 510 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P30-201ENST00000457863 CTDSPL2Q05D32 466 aa6.4□□□□□ -1.38
HMGB3P30-201ENST00000457863 ITPKCQ96DU7 683 aa6.4□□□□□ -1.38
HMGB3P30-201ENST00000457863 FAM117AQ9C073 453 aa6.4□□□□□ -1.38
HMGB3P30-201ENST00000457863 CCDC9Q9Y3X0 531 aaKnown RBP6.4□□□□□ -1.38
HMGB3P30-201ENST00000457863 ERFEQ4G0M1 354 aa6.39□□□□□ -1.39
HMGB3P30-201ENST00000457863 MEIOBQ8N635 442 aa6.39□□□□□ -1.39
HMGB3P30-201ENST00000457863 SLC16A10Q8TF71 515 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms