RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 LMOD3Q0VAK6 560 aa4.19□□□□□ -1.74
HMGN1P18-201ENST00000457642 ALDH1L2Q3SY69 923 aa4.19□□□□□ -1.74
HMGN1P18-201ENST00000457642 ATF7IPQ6VMQ6 1270 aa4.19□□□□□ -1.74
HMGN1P18-201ENST00000457642 GBP4Q96PP9 640 aa4.19□□□□□ -1.74
HMGN1P18-201ENST00000457642 C22orf23Q9BZE7 217 aa4.19□□□□□ -1.74
HMGN1P18-201ENST00000457642 RSPH6AQ9H0K4 717 aa4.19□□□□□ -1.74
HMGN1P18-201ENST00000457642 SLKQ9H2G2 1235 aaPredicted RBP4.19□□□□□ -1.74
HMGN1P18-201ENST00000457642 RTN4Q9NQC3 1192 aaKnown RBP4.19□□□□□ -1.74
HMGN1P18-201ENST00000457642 POGKQ9P215 609 aa4.19□□□□□ -1.74
HMGN1P18-201ENST00000457642 BRPF3Q9ULD4 1205 aa4.19□□□□□ -1.74
HMGN1P18-201ENST00000457642 DMRT2Q9Y5R5 561 aa4.19□□□□□ -1.74
HMGN1P18-201ENST00000457642 CLTCQ00610 1675 aaKnown RBP4.19□□□□□ -1.74
HMGN1P18-201ENST00000457642 NLRP1Q9C000 1473 aa4.18□□□□□ -1.74
HMGN1P18-201ENST00000457642 A0A1W2PP64 1363 aa4.18□□□□□ -1.74
HMGN1P18-201ENST00000457642 GOLGA6L22H0YM25 854 aa4.18□□□□□ -1.74
HMGN1P18-201ENST00000457642 TMPOP42166 694 aaKnown RBP4.18□□□□□ -1.74
HMGN1P18-201ENST00000457642 MFAP1P55081 439 aaKnown RBP4.18□□□□□ -1.74
HMGN1P18-201ENST00000457642 EXOSC9Q06265 439 aaKnown RBP4.18□□□□□ -1.74
HMGN1P18-201ENST00000457642 TMEM132EQ6IEE7 984 aa4.18□□□□□ -1.74
HMGN1P18-201ENST00000457642 GCC1Q96CN9 775 aa4.18□□□□□ -1.74
HMGN1P18-201ENST00000457642 BCL2L13Q9BXK5 485 aa4.18□□□□□ -1.74
HMGN1P18-201ENST00000457642 CABP2Q9NPB3 220 aa4.18□□□□□ -1.74
HMGN1P18-201ENST00000457642 STAG3Q9UJ98 1225 aa4.18□□□□□ -1.74
HMGN1P18-201ENST00000457642 CIZ1Q9ULV3 898 aaPredicted RBP4.18□□□□□ -1.74
HMGN1P18-201ENST00000457642 PCDHB15Q9Y5E8 787 aa4.18□□□□□ -1.74
HMGN1P18-201ENST00000457642 CFAP65Q6ZU64 1925 aaKnown RBP4.18□□□□□ -1.74
HMGN1P18-201ENST00000457642 CDC42BPGQ6DT37 1551 aa4.18□□□□□ -1.74
HMGN1P18-201ENST00000457642 DIP2CQ9Y2E4 1556 aa4.18□□□□□ -1.74
HMGN1P18-201ENST00000457642 USP19O94966 1318 aa4.18□□□□□ -1.74
HMGN1P18-201ENST00000457642 FCHSD2O94868 740 aa4.17□□□□□ -1.74
HMGN1P18-201ENST00000457642 HSP90AA1P07900 732 aaKnown RBP4.17□□□□□ -1.74
HMGN1P18-201ENST00000457642 HSP90AB1P08238 724 aaKnown RBP4.17□□□□□ -1.74
HMGN1P18-201ENST00000457642 RLBP1P12271 317 aa4.17□□□□□ -1.74
HMGN1P18-201ENST00000457642 RIPK4P57078 832 aa4.17□□□□□ -1.74
HMGN1P18-201ENST00000457642 GNAI1P63096 354 aa4.17□□□□□ -1.74
HMGN1P18-201ENST00000457642 SKOR2Q2VWA4 1001 aaPredicted RBP4.17□□□□□ -1.74
HMGN1P18-201ENST00000457642 CASC1Q6TDU7 716 aa4.17□□□□□ -1.74
HMGN1P18-201ENST00000457642 ANP32BQ92688 251 aaKnown RBP4.17□□□□□ -1.74
HMGN1P18-201ENST00000457642 TBC1D2Q9BYX2 928 aa4.17□□□□□ -1.74
HMGN1P18-201ENST00000457642 YTHDC2Q9H6S0 1430 aaKnown RBP4.17□□□□□ -1.74
HMGN1P18-201ENST00000457642 COL3A1P02461 1466 aaPredicted RBP4.17□□□□□ -1.74
HMGN1P18-201ENST00000457642 ATP7BP35670 1465 aa4.17□□□□□ -1.74
HMGN1P18-201ENST00000457642 PREX1Q8TCU6 1659 aa4.16□□□□□ -1.74
HMGN1P18-201ENST00000457642 DLC1Q96QB1 1528 aa4.16□□□□□ -1.74
HMGN1P18-201ENST00000457642 PPIP5K1Q6PFW1 1433 aa4.16□□□□□ -1.74
HMGN1P18-201ENST00000457642 SEC24BO95487 1268 aa4.16□□□□□ -1.74
HMGN1P18-201ENST00000457642 TRIM27P14373 513 aa4.16□□□□□ -1.74
HMGN1P18-201ENST00000457642 MCM4P33991 863 aa4.16□□□□□ -1.74
HMGN1P18-201ENST00000457642 MRE11P49959 708 aa4.16□□□□□ -1.74
HMGN1P18-201ENST00000457642 SAFB2Q14151 953 aaKnown RBP eCLIP4.16□□□□□ -1.74
HMGN1P18-201ENST00000457642 SMC5Q8IY18 1101 aa4.16□□□□□ -1.74
HMGN1P18-201ENST00000457642 SSH1Q8WYL5 1049 aa4.16□□□□□ -1.74
HMGN1P18-201ENST00000457642 ARHGAP45Q92619 1136 aa4.16□□□□□ -1.74
HMGN1P18-201ENST00000457642 TSR2Q969E8 191 aaKnown RBP4.16□□□□□ -1.74
HMGN1P18-201ENST00000457642 SNX21Q969T3 373 aa4.16□□□□□ -1.74
HMGN1P18-201ENST00000457642 API5Q9BZZ5 524 aaKnown RBP4.16□□□□□ -1.74
HMGN1P18-201ENST00000457642 GGNBP2Q9H3C7 697 aa4.16□□□□□ -1.74
HMGN1P18-201ENST00000457642 STK26Q9P289 416 aa4.16□□□□□ -1.74
HMGN1P18-201ENST00000457642 NOB1Q9ULX3 412 aaKnown RBP4.16□□□□□ -1.74
HMGN1P18-201ENST00000457642 MINK1Q8N4C8 1332 aaPredicted RBP4.16□□□□□ -1.74
HMGN1P18-201ENST00000457642 KIF24Q5T7B8 1368 aa4.15□□□□□ -1.74
HMGN1P18-201ENST00000457642 SIGLEC1Q9BZZ2 1709 aa4.15□□□□□ -1.74
HMGN1P18-201ENST00000457642 PTCH1Q13635 1447 aa4.15□□□□□ -1.74
HMGN1P18-201ENST00000457642 FAM135BQ49AJ0 1406 aa4.15□□□□□ -1.74
HMGN1P18-201ENST00000457642 TMEM131LA2VDJ0 1609 aa4.15□□□□□ -1.74
HMGN1P18-201ENST00000457642 TRAK2O60296 914 aa4.15□□□□□ -1.75
HMGN1P18-201ENST00000457642 CDC45O75419 566 aa4.15□□□□□ -1.75
HMGN1P18-201ENST00000457642 BRPF1P55201 1214 aaPredicted RBP4.15□□□□□ -1.75
HMGN1P18-201ENST00000457642 NUCB1Q02818 461 aa4.15□□□□□ -1.75
HMGN1P18-201ENST00000457642 NFE2L2Q16236 605 aa4.15□□□□□ -1.75
HMGN1P18-201ENST00000457642 BMP2KLQ5H9B9 411 aa4.15□□□□□ -1.75
HMGN1P18-201ENST00000457642 CHD1LQ86WJ1 897 aa4.15□□□□□ -1.75
HMGN1P18-201ENST00000457642 TMEM57Q8N5G2 664 aa4.15□□□□□ -1.75
HMGN1P18-201ENST00000457642 TRIM44Q96DX7 344 aaPredicted RBP4.15□□□□□ -1.75
HMGN1P18-201ENST00000457642 PRAM1Q96QH2 718 aa4.15□□□□□ -1.75
HMGN1P18-201ENST00000457642 PLEKHF1Q96S99 279 aa4.15□□□□□ -1.75
HMGN1P18-201ENST00000457642 ANTXR1Q9H6X2 564 aa4.15□□□□□ -1.75
HMGN1P18-201ENST00000457642 ZBTB40Q9NUA8 1239 aa4.15□□□□□ -1.75
HMGN1P18-201ENST00000457642 IFT57Q9NWB7 429 aa4.15□□□□□ -1.75
HMGN1P18-201ENST00000457642 PPP6R1Q9UPN7 881 aa4.15□□□□□ -1.75
HMGN1P18-201ENST00000457642 PTPRMP28827 1452 aa4.15□□□□□ -1.75
HMGN1P18-201ENST00000457642 LRRC7Q96NW7 1537 aa4.15□□□□□ -1.75
HMGN1P18-201ENST00000457642 RICTORQ6R327 1708 aa4.15□□□□□ -1.75
HMGN1P18-201ENST00000457642 PNPLA6Q8IY17 1366 aa4.14□□□□□ -1.75
HMGN1P18-201ENST00000457642 ALKQ9UM73 1620 aa4.14□□□□□ -1.75
HMGN1P18-201ENST00000457642 EDC4Q6P2E9 1401 aaKnown RBP4.14□□□□□ -1.75
HMGN1P18-201ENST00000457642 CDK12Q9NYV4 1490 aaPredicted RBP4.14□□□□□ -1.75
HMGN1P18-201ENST00000457642 FYB1O15117 783 aa4.14□□□□□ -1.75
HMGN1P18-201ENST00000457642 PRKAR2BP31323 418 aa4.14□□□□□ -1.75
HMGN1P18-201ENST00000457642 RBM25P49756 843 aaKnown RBP4.14□□□□□ -1.75
HMGN1P18-201ENST00000457642 HDGFP51858 240 aaKnown RBP4.14□□□□□ -1.75
HMGN1P18-201ENST00000457642 IDI1Q13907 227 aa4.14□□□□□ -1.75
HMGN1P18-201ENST00000457642 GLIPR1L2Q4G1C9 344 aa4.14□□□□□ -1.75
HMGN1P18-201ENST00000457642 NUTM2DQ5VT03 806 aaPredicted RBP4.14□□□□□ -1.75
HMGN1P18-201ENST00000457642 OSCARQ8IYS5 282 aa4.14□□□□□ -1.75
HMGN1P18-201ENST00000457642 SPRYD3Q8NCJ5 442 aa4.14□□□□□ -1.75
HMGN1P18-201ENST00000457642 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.14□□□□□ -1.75
HMGN1P18-201ENST00000457642 CDK19Q9BWU1 502 aa4.14□□□□□ -1.75
HMGN1P18-201ENST00000457642 LNPKQ9C0E8 428 aa4.14□□□□□ -1.75
HMGN1P18-201ENST00000457642 TRIM35Q9UPQ4 493 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms