RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 ATP7AQ04656 1500 aa11.96□□□□□ -0.49
MSC-AS1-201ENST00000457356 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.96□□□□□ -0.49
MSC-AS1-201ENST00000457356 PHF14O94880 888 aa11.96□□□□□ -0.49
MSC-AS1-201ENST00000457356 TTC5Q8N0Z6 440 aa11.96□□□□□ -0.49
MSC-AS1-201ENST00000457356 CLASP1Q7Z460 1538 aa11.96□□□□□ -0.49
MSC-AS1-201ENST00000457356 HSP90B1P14625 803 aaKnown RBP11.96□□□□□ -0.5
MSC-AS1-201ENST00000457356 TRAK2O60296 914 aa11.95□□□□□ -0.5
MSC-AS1-201ENST00000457356 MRE11P49959 708 aa11.95□□□□□ -0.5
MSC-AS1-201ENST00000457356 RILPL2Q969X0 211 aa11.95□□□□□ -0.5
MSC-AS1-201ENST00000457356 ZCCHC11Q5TAX3 1644 aaKnown RBP11.95□□□□□ -0.5
MSC-AS1-201ENST00000457356 HTATSF1O43719 755 aaKnown RBP11.95□□□□□ -0.5
MSC-AS1-201ENST00000457356 DIAPH1O60610 1272 aaKnown RBP11.95□□□□□ -0.5
MSC-AS1-201ENST00000457356 DDX54Q8TDD1 881 aaKnown RBP11.95□□□□□ -0.5
MSC-AS1-201ENST00000457356 PDE4CQ08493 712 aa11.94□□□□□ -0.5
MSC-AS1-201ENST00000457356 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.94□□□□□ -0.5
MSC-AS1-201ENST00000457356 NBPF8Q3BBV2 869 aa11.94□□□□□ -0.5
MSC-AS1-201ENST00000457356 ZKSCAN2Q63HK3 967 aa11.94□□□□□ -0.5
MSC-AS1-201ENST00000457356 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.94□□□□□ -0.5
MSC-AS1-201ENST00000457356 WASHC2AQ641Q2 1341 aa11.94□□□□□ -0.5
MSC-AS1-201ENST00000457356 DCAF8L1A6NGE4 600 aa11.94□□□□□ -0.5
MSC-AS1-201ENST00000457356 HMMRO75330 724 aa11.94□□□□□ -0.5
MSC-AS1-201ENST00000457356 C22orf23Q9BZE7 217 aa11.94□□□□□ -0.5
MSC-AS1-201ENST00000457356 LNPKQ9C0E8 428 aa11.94□□□□□ -0.5
MSC-AS1-201ENST00000457356 LRPPRCP42704 1394 aaKnown RBP11.93□□□□□ -0.5
MSC-AS1-201ENST00000457356 C8orf37Q96NL8 207 aa11.93□□□□□ -0.5
MSC-AS1-201ENST00000457356 E9PSI1 815 aa11.93□□□□□ -0.5
MSC-AS1-201ENST00000457356 WASLO00401 505 aaPredicted RBP11.93□□□□□ -0.5
MSC-AS1-201ENST00000457356 MCTP1Q6DN14 999 aa11.93□□□□□ -0.5
MSC-AS1-201ENST00000457356 TBX22Q9Y458 520 aa11.93□□□□□ -0.5
MSC-AS1-201ENST00000457356 BECN2A8MW95 431 aa11.93□□□□□ -0.5
MSC-AS1-201ENST00000457356 LMOD3Q0VAK6 560 aa11.93□□□□□ -0.5
MSC-AS1-201ENST00000457356 GOLGA6L1Q8N7Z2 621 aa11.93□□□□□ -0.5
MSC-AS1-201ENST00000457356 CHMP4AQ9BY43 222 aa11.93□□□□□ -0.5
MSC-AS1-201ENST00000457356 NASPP49321 788 aaPredicted RBP11.92□□□□□ -0.5
MSC-AS1-201ENST00000457356 MPNDQ8N594 471 aa11.92□□□□□ -0.5
MSC-AS1-201ENST00000457356 PANK1Q8TE04 598 aa11.92□□□□□ -0.5
MSC-AS1-201ENST00000457356 NPHP3Q7Z494 1330 aa11.92□□□□□ -0.5
MSC-AS1-201ENST00000457356 RRP9O43818 475 aaKnown RBP11.92□□□□□ -0.5
MSC-AS1-201ENST00000457356 MAPK8IP2Q13387 824 aaPredicted RBP11.92□□□□□ -0.5
MSC-AS1-201ENST00000457356 STK31Q9BXU1 1019 aa11.92□□□□□ -0.5
MSC-AS1-201ENST00000457356 BACH2Q9BYV9 841 aa11.92□□□□□ -0.5
MSC-AS1-201ENST00000457356 HMOX1P09601 288 aa11.91□□□□□ -0.5
MSC-AS1-201ENST00000457356 SF3A1Q15459 793 aaKnown RBP11.91□□□□□ -0.5
MSC-AS1-201ENST00000457356 C14orf93Q9H972 538 aaKnown RBP11.91□□□□□ -0.5
MSC-AS1-201ENST00000457356 MAPKBP1O60336 1514 aa11.91□□□□□ -0.5
MSC-AS1-201ENST00000457356 GOLGA6L19H0YKK7 550 aa11.91□□□□□ -0.5
MSC-AS1-201ENST00000457356 ATAD2Q6PL18 1390 aa11.91□□□□□ -0.5
MSC-AS1-201ENST00000457356 KIF16BQ96L93 1317 aa11.91□□□□□ -0.5
MSC-AS1-201ENST00000457356 MAGI2Q86UL8 1455 aa11.91□□□□□ -0.5
MSC-AS1-201ENST00000457356 TATP17735 454 aaPredicted RBP11.91□□□□□ -0.5
MSC-AS1-201ENST00000457356 NOC3LQ8WTT2 800 aaKnown RBP11.91□□□□□ -0.5
MSC-AS1-201ENST00000457356 CSPP1Q1MSJ5 1256 aa11.91□□□□□ -0.5
MSC-AS1-201ENST00000457356 TPM4P67936 248 aa11.9□□□□□ -0.5
MSC-AS1-201ENST00000457356 NGEFQ8N5V2 710 aa11.9□□□□□ -0.5
MSC-AS1-201ENST00000457356 KCNH5Q8NCM2 988 aa11.9□□□□□ -0.5
MSC-AS1-201ENST00000457356 PPP1R1BQ9UD71 204 aaPredicted RBP11.9□□□□□ -0.51
MSC-AS1-201ENST00000457356 KIF7Q2M1P5 1343 aa11.89□□□□□ -0.51
MSC-AS1-201ENST00000457356 PTPRKQ15262 1439 aa11.89□□□□□ -0.51
MSC-AS1-201ENST00000457356 RRAGDQ9NQL2 400 aaPredicted RBP11.89□□□□□ -0.51
MSC-AS1-201ENST00000457356 CFAP65Q6ZU64 1925 aaKnown RBP11.89□□□□□ -0.51
MSC-AS1-201ENST00000457356 CFAP74Q9C0B2 1584 aa11.89□□□□□ -0.51
MSC-AS1-201ENST00000457356 MAGI3Q5TCQ9 1506 aa11.89□□□□□ -0.51
MSC-AS1-201ENST00000457356 LRRC59Q96AG4 307 aaKnown RBP11.88□□□□□ -0.51
MSC-AS1-201ENST00000457356 PRDM10Q9NQV6 1147 aa11.88□□□□□ -0.51
MSC-AS1-201ENST00000457356 DZIP1LQ8IYY4 767 aaKnown RBP11.87□□□□□ -0.51
MSC-AS1-201ENST00000457356 ZHX1Q9UKY1 873 aaPredicted RBP11.87□□□□□ -0.51
MSC-AS1-201ENST00000457356 LTKP29376 864 aa11.87□□□□□ -0.51
MSC-AS1-201ENST00000457356 CAVIN1Q6NZI2 390 aaKnown RBP11.87□□□□□ -0.51
MSC-AS1-201ENST00000457356 CHRNA2Q15822 529 aa11.87□□□□□ -0.51
MSC-AS1-201ENST00000457356 MTHFSP49914 203 aa11.87□□□□□ -0.51
MSC-AS1-201ENST00000457356 RBM42Q9BTD8 480 aaKnown RBP11.86□□□□□ -0.51
MSC-AS1-201ENST00000457356 SMG6Q86US8 1419 aaKnown RBP11.86□□□□□ -0.51
MSC-AS1-201ENST00000457356 RRS1Q15050 365 aaKnown RBP11.86□□□□□ -0.51
MSC-AS1-201ENST00000457356 SLAIN2Q9P270 581 aa11.86□□□□□ -0.51
MSC-AS1-201ENST00000457356 ATP6V1DQ9Y5K8 247 aa11.86□□□□□ -0.51
MSC-AS1-201ENST00000457356 MYO5CQ9NQX4 1742 aa11.86□□□□□ -0.51
MSC-AS1-201ENST00000457356 G3V3G9 751 aa11.86□□□□□ -0.51
MSC-AS1-201ENST00000457356 DCAF8Q5TAQ9 597 aa11.86□□□□□ -0.51
MSC-AS1-201ENST00000457356 ADAMTS8Q9UP79 889 aa11.86□□□□□ -0.51
MSC-AS1-201ENST00000457356 PLEKHO1Q53GL0 409 aaPredicted RBP11.85□□□□□ -0.51
MSC-AS1-201ENST00000457356 IFT57Q9NWB7 429 aa11.85□□□□□ -0.51
MSC-AS1-201ENST00000457356 EIF2S2P20042 333 aaKnown RBP11.85□□□□□ -0.51
MSC-AS1-201ENST00000457356 NUCB2P80303 420 aa11.85□□□□□ -0.51
MSC-AS1-201ENST00000457356 HOMER1Q86YM7 354 aa11.85□□□□□ -0.51
MSC-AS1-201ENST00000457356 ANO2Q9NQ90 1003 aa11.85□□□□□ -0.51
MSC-AS1-201ENST00000457356 ISY1Q9ULR0 285 aaKnown RBP11.85□□□□□ -0.51
MSC-AS1-201ENST00000457356 ADCY10Q96PN6 1610 aa11.85□□□□□ -0.51
MSC-AS1-201ENST00000457356 CCDC7Q96M83 1385 aa11.85□□□□□ -0.51
MSC-AS1-201ENST00000457356 H3BQV1 296 aa11.84□□□□□ -0.51
MSC-AS1-201ENST00000457356 IFFO2Q5TF58 517 aa11.84□□□□□ -0.51
MSC-AS1-201ENST00000457356 DDX19BQ9UMR2 479 aa11.84□□□□□ -0.51
MSC-AS1-201ENST00000457356 MLH3Q9UHC1 1453 aa11.84□□□□□ -0.51
MSC-AS1-201ENST00000457356 CABLES1Q8TDN4 633 aa11.84□□□□□ -0.51
MSC-AS1-201ENST00000457356 FBXW7Q969H0 707 aa11.84□□□□□ -0.51
MSC-AS1-201ENST00000457356 TMEM2Q9UHN6 1383 aa11.84□□□□□ -0.51
MSC-AS1-201ENST00000457356 ESPNB1AK53 854 aa11.84□□□□□ -0.51
MSC-AS1-201ENST00000457356 REC8O95072 547 aa11.84□□□□□ -0.51
MSC-AS1-201ENST00000457356 TPM3P06753 285 aa11.84□□□□□ -0.51
MSC-AS1-201ENST00000457356 TTC37Q6PGP7 1564 aa11.84□□□□□ -0.51
MSC-AS1-201ENST00000457356 SHANK2Q9UPX8 1470 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms