RNA–Protein interactions for RNA: ENST00000457226.2

SMARCA2-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-216ENST00000457226 PLCH1Q4KWH8 1693 aa19.3■□□□□ 0.68
SMARCA2-216ENST00000457226 PLEKHG3A1L390 1219 aa19.29■□□□□ 0.68
SMARCA2-216ENST00000457226 ONECUT3O60422 494 aaPredicted RBP19.28■□□□□ 0.68
SMARCA2-216ENST00000457226 SRPK2P78362 688 aaKnown RBP19.28■□□□□ 0.68
SMARCA2-216ENST00000457226 ACEP12821 1306 aa19.27■□□□□ 0.68
SMARCA2-216ENST00000457226 COL14A1Q05707 1796 aaKnown RBP19.27■□□□□ 0.68
SMARCA2-216ENST00000457226 NBPF8Q3BBV2 869 aa19.27■□□□□ 0.68
SMARCA2-216ENST00000457226 BTG4Q9NY30 223 aa19.27■□□□□ 0.68
SMARCA2-216ENST00000457226 SEPT12Q8IYM1 358 aa19.26■□□□□ 0.67
SMARCA2-216ENST00000457226 PRDM11Q9NQV5 511 aa19.26■□□□□ 0.67
SMARCA2-216ENST00000457226 BRD4O60885 1362 aaPredicted RBP19.26■□□□□ 0.67
SMARCA2-216ENST00000457226 TOPAZ1Q8N9V7 1692 aa19.25■□□□□ 0.67
SMARCA2-216ENST00000457226 NEUROD1Q13562 356 aa19.23■□□□□ 0.67
SMARCA2-216ENST00000457226 BLMP54132 1417 aaPredicted RBP19.23■□□□□ 0.67
SMARCA2-216ENST00000457226 PPIP5K1Q6PFW1 1433 aa19.23■□□□□ 0.67
SMARCA2-216ENST00000457226 SF3B2Q13435 895 aaKnown RBP19.22■□□□□ 0.67
SMARCA2-216ENST00000457226 KRT27Q7Z3Y8 459 aa19.22■□□□□ 0.67
SMARCA2-216ENST00000457226 SIN3AQ96ST3 1273 aa19.22■□□□□ 0.67
SMARCA2-216ENST00000457226 EVC2Q86UK5 1308 aa19.22■□□□□ 0.67
SMARCA2-216ENST00000457226 ROCK2O75116 1388 aaKnown RBP19.21■□□□□ 0.67
SMARCA2-216ENST00000457226 A0A0G2JS52 829 aa19.21■□□□□ 0.67
SMARCA2-216ENST00000457226 MYT1Q01538 1121 aa19.21■□□□□ 0.67
SMARCA2-216ENST00000457226 ABTB2Q8N961 1025 aa19.21■□□□□ 0.67
SMARCA2-216ENST00000457226 NRAPQ86VF7 1730 aa19.2■□□□□ 0.66
SMARCA2-216ENST00000457226 CRYBG1Q9Y4K1 1723 aa19.2■□□□□ 0.66
SMARCA2-216ENST00000457226 ZRANB1Q9UGI0 708 aa19.2■□□□□ 0.66
SMARCA2-216ENST00000457226 KIAA0232Q92628 1395 aa19.19■□□□□ 0.66
SMARCA2-216ENST00000457226 TRPM1Q7Z4N2 1603 aa19.19■□□□□ 0.66
SMARCA2-216ENST00000457226 NLRP13Q86W25 1043 aa19.19■□□□□ 0.66
SMARCA2-216ENST00000457226 CABP2Q9NPB3 220 aa19.19■□□□□ 0.66
SMARCA2-216ENST00000457226 QRICH2Q9H0J4 1663 aa19.19■□□□□ 0.66
SMARCA2-216ENST00000457226 SPATA31A5Q5VU36 1347 aa19.19■□□□□ 0.66
SMARCA2-216ENST00000457226 SPATA31A7Q8IWB4 1347 aa19.19■□□□□ 0.66
SMARCA2-216ENST00000457226 EP400Q96L91 3159 aa19.19■□□□□ 0.66
SMARCA2-216ENST00000457226 FAM98CQ17RN3 349 aaKnown RBP19.18■□□□□ 0.66
SMARCA2-216ENST00000457226 PHRF1Q9P1Y6 1649 aaKnown RBP19.17■□□□□ 0.66
SMARCA2-216ENST00000457226 CPDO75976 1380 aa19.17■□□□□ 0.66
SMARCA2-216ENST00000457226 NUTM2GQ5VZR2 741 aa19.16■□□□□ 0.66
SMARCA2-216ENST00000457226 USP19O94966 1318 aa19.16■□□□□ 0.66
SMARCA2-216ENST00000457226 ZC3H6P61129 1189 aaKnown RBP19.15■□□□□ 0.66
SMARCA2-216ENST00000457226 CABP1Q9NZU7 370 aa19.15■□□□□ 0.66
SMARCA2-216ENST00000457226 EVA1CP58658 441 aa19.14■□□□□ 0.65
SMARCA2-216ENST00000457226 USP6P35125 1406 aa19.14■□□□□ 0.65
SMARCA2-216ENST00000457226 CHRNA2Q15822 529 aa19.13■□□□□ 0.65
SMARCA2-216ENST00000457226 ZNF692Q9BU19 519 aaPredicted RBP19.13■□□□□ 0.65
SMARCA2-216ENST00000457226 SPATA31A1Q5TZJ5 1347 aa19.13■□□□□ 0.65
SMARCA2-216ENST00000457226 BRWD3Q6RI45 1802 aa19.12■□□□□ 0.65
SMARCA2-216ENST00000457226 TONSLQ96HA7 1378 aa19.12■□□□□ 0.65
SMARCA2-216ENST00000457226 GCP02774 474 aa19.12■□□□□ 0.65
SMARCA2-216ENST00000457226 NRKQ7Z2Y5 1582 aa19.11■□□□□ 0.65
SMARCA2-216ENST00000457226 SBNO2Q9Y2G9 1366 aa19.11■□□□□ 0.65
SMARCA2-216ENST00000457226 STRN4Q9NRL3 753 aa19.11■□□□□ 0.65
SMARCA2-216ENST00000457226 BAG6P46379 1132 aa19.1■□□□□ 0.65
SMARCA2-216ENST00000457226 NLRP6P59044 892 aa19.09■□□□□ 0.65
SMARCA2-216ENST00000457226 BARGINQ6ZT62 677 aa19.09■□□□□ 0.65
SMARCA2-216ENST00000457226 SSH2Q76I76 1423 aa19.08■□□□□ 0.65
SMARCA2-216ENST00000457226 THSD7AQ9UPZ6 1657 aa19.08■□□□□ 0.65
SMARCA2-216ENST00000457226 TRIM26Q12899 539 aaPredicted RBP19.08■□□□□ 0.64
SMARCA2-216ENST00000457226 CARD11Q9BXL7 1154 aa19.08■□□□□ 0.64
SMARCA2-216ENST00000457226 THRAP3Q9Y2W1 955 aaKnown RBP19.07■□□□□ 0.64
SMARCA2-216ENST00000457226 TTC21AQ8NDW8 1320 aa19.06■□□□□ 0.64
SMARCA2-216ENST00000457226 CAMTA1Q9Y6Y1 1673 aa19.05■□□□□ 0.64
SMARCA2-216ENST00000457226 FAM196AQ6ZSG2 479 aa19.05■□□□□ 0.64
SMARCA2-216ENST00000457226 DEFB132Q7Z7B7 95 aa19.05■□□□□ 0.64
SMARCA2-216ENST00000457226 TCP11L2Q8N4U5 519 aa19.05■□□□□ 0.64
SMARCA2-216ENST00000457226 KCNH5Q8NCM2 988 aa19.05■□□□□ 0.64
SMARCA2-216ENST00000457226 AATKQ6ZMQ8 1374 aa19.05■□□□□ 0.64
SMARCA2-216ENST00000457226 SLIT3O75094 1523 aa19.05■□□□□ 0.64
SMARCA2-216ENST00000457226 LMO7Q8WWI1 1683 aa19.05■□□□□ 0.64
SMARCA2-216ENST00000457226 SLC24A1O60721 1099 aa19.04■□□□□ 0.64
SMARCA2-216ENST00000457226 PDE3BQ13370 1112 aa19.04■□□□□ 0.64
SMARCA2-216ENST00000457226 USP35Q9P2H5 1018 aa19.04■□□□□ 0.64
SMARCA2-216ENST00000457226 C11orf95C9JLR9 678 aaPredicted RBP19.03■□□□□ 0.64
SMARCA2-216ENST00000457226 LARP1Q6PKG0 1096 aaKnown RBP19.03■□□□□ 0.64
SMARCA2-216ENST00000457226 TTC21BQ7Z4L5 1316 aa19.02■□□□□ 0.64
SMARCA2-216ENST00000457226 CPSF1Q10570 1443 aaKnown RBP19.02■□□□□ 0.64
SMARCA2-216ENST00000457226 KTN1Q86UP2 1357 aaKnown RBP19.02■□□□□ 0.64
SMARCA2-216ENST00000457226 COL5A2P05997 1499 aaPredicted RBP19.02■□□□□ 0.63
SMARCA2-216ENST00000457226 CRB1P82279 1406 aa19.01■□□□□ 0.63
SMARCA2-216ENST00000457226 RGPD1P0DJD0 1748 aa19.01■□□□□ 0.63
SMARCA2-216ENST00000457226 PUS7Q96PZ0 661 aaKnown RBP19.01■□□□□ 0.63
SMARCA2-216ENST00000457226 DISP2A7MBM2 1401 aa19■□□□□ 0.63
SMARCA2-216ENST00000457226 PIK3C2AO00443 1686 aa18.99■□□□□ 0.63
SMARCA2-216ENST00000457226 ZBTB7CA1YPR0 619 aa18.99■□□□□ 0.63
SMARCA2-216ENST00000457226 FAM182BQ5T319 152 aa18.98■□□□□ 0.63
SMARCA2-216ENST00000457226 HDGFL2Q7Z4V5 671 aaPredicted RBP18.98■□□□□ 0.63
SMARCA2-216ENST00000457226 PARD3Q8TEW0 1356 aa18.97■□□□□ 0.63
SMARCA2-216ENST00000457226 AKAP12Q02952 1782 aa18.97■□□□□ 0.63
SMARCA2-216ENST00000457226 TERF2IPQ9NYB0 399 aa18.97■□□□□ 0.63
SMARCA2-216ENST00000457226 TOM1L2Q6ZVM7 507 aa18.96■□□□□ 0.63
SMARCA2-216ENST00000457226 ARHGEF25Q86VW2 580 aa18.96■□□□□ 0.63
SMARCA2-216ENST00000457226 CDCA7Q9BWT1 371 aaPredicted RBP18.96■□□□□ 0.63
SMARCA2-216ENST00000457226 EN1Q05925 392 aaPredicted RBP18.95■□□□□ 0.62
SMARCA2-216ENST00000457226 TMC1Q8TDI8 760 aa18.95■□□□□ 0.62
SMARCA2-216ENST00000457226 WDR17Q8IZU2 1322 aa18.95■□□□□ 0.62
SMARCA2-216ENST00000457226 NINLQ9Y2I6 1382 aa18.94■□□□□ 0.62
SMARCA2-216ENST00000457226 TRIM37O94972 964 aa18.94■□□□□ 0.62
SMARCA2-216ENST00000457226 ABCC6O95255 1503 aa18.94■□□□□ 0.62
SMARCA2-216ENST00000457226 USP31Q70CQ4 1352 aa18.93■□□□□ 0.62
SMARCA2-216ENST00000457226 EDC4Q6P2E9 1401 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms