RNA–Protein interactions for RNA: ENST00000456923.5

FN1-213, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 3,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-213ENST00000456923 ATP7BP35670 1465 aa9.01□□□□□ -0.97
FN1-213ENST00000456923 ANP32AP39687 249 aaKnown RBP9□□□□□ -0.97
FN1-213ENST00000456923 PLCH1Q4KWH8 1693 aa9□□□□□ -0.97
FN1-213ENST00000456923 TMEM94Q12767 1356 aa9□□□□□ -0.97
FN1-213ENST00000456923 ROBO2Q9HCK4 1378 aa9□□□□□ -0.97
FN1-213ENST00000456923 C1orf167Q5SNV9 1468 aa8.99□□□□□ -0.97
FN1-213ENST00000456923 FANCIQ9NVI1 1328 aa8.99□□□□□ -0.97
FN1-213ENST00000456923 MSH6P52701 1360 aa8.98□□□□□ -0.97
FN1-213ENST00000456923 ZNF526Q8TF50 670 aaPredicted RBP8.98□□□□□ -0.97
FN1-213ENST00000456923 FAM208AQ9UK61 1670 aaKnown RBP8.98□□□□□ -0.97
FN1-213ENST00000456923 SLIT3O75094 1523 aa8.98□□□□□ -0.97
FN1-213ENST00000456923 ADGRF5Q8IZF2 1346 aa8.98□□□□□ -0.97
FN1-213ENST00000456923 CAMTA1Q9Y6Y1 1673 aa8.97□□□□□ -0.97
FN1-213ENST00000456923 CDK12Q9NYV4 1490 aaPredicted RBP8.97□□□□□ -0.97
FN1-213ENST00000456923 POLR3AO14802 1390 aaPredicted RBP8.97□□□□□ -0.97
FN1-213ENST00000456923 LMO7Q8WWI1 1683 aa8.97□□□□□ -0.97
FN1-213ENST00000456923 HOMEZQ8IX15 550 aa8.96□□□□□ -0.97
FN1-213ENST00000456923 SBNO1A3KN83 1393 aa8.96□□□□□ -0.98
FN1-213ENST00000456923 NINLQ9Y2I6 1382 aa8.96□□□□□ -0.98
FN1-213ENST00000456923 COL14A1Q05707 1796 aaKnown RBP8.95□□□□□ -0.98
FN1-213ENST00000456923 SSH2Q76I76 1423 aa8.95□□□□□ -0.98
FN1-213ENST00000456923 PATL2C9JE40 543 aaKnown RBP8.95□□□□□ -0.98
FN1-213ENST00000456923 C19orf44Q9H6X5 657 aa8.95□□□□□ -0.98
FN1-213ENST00000456923 KIF20BQ96Q89 1820 aa8.95□□□□□ -0.98
FN1-213ENST00000456923 PIK3C2AO00443 1686 aa8.94□□□□□ -0.98
FN1-213ENST00000456923 WWC1Q8IX03 1113 aa8.94□□□□□ -0.98
FN1-213ENST00000456923 CNPY4Q8N129 248 aa8.94□□□□□ -0.98
FN1-213ENST00000456923 COL18A1P39060 1754 aa8.94□□□□□ -0.98
FN1-213ENST00000456923 CDK11BP21127 795 aaKnown RBP8.94□□□□□ -0.98
FN1-213ENST00000456923 SECISBP2LQ93073 1101 aaKnown RBP8.94□□□□□ -0.98
FN1-213ENST00000456923 ZNF326Q5BKZ1 582 aaKnown RBP8.94□□□□□ -0.98
FN1-213ENST00000456923 AEBP1Q8IUX7 1158 aa8.94□□□□□ -0.98
FN1-213ENST00000456923 RGPD3A6NKT7 1758 aaPredicted RBP8.92□□□□□ -0.98
FN1-213ENST00000456923 RGPD4Q7Z3J3 1758 aa8.92□□□□□ -0.98
FN1-213ENST00000456923 AMOTL2Q9Y2J4 779 aa8.92□□□□□ -0.98
FN1-213ENST00000456923 TOM1O60784 492 aa8.92□□□□□ -0.98
FN1-213ENST00000456923 CADPS2Q86UW7 1296 aa8.92□□□□□ -0.98
FN1-213ENST00000456923 STAG3Q9UJ98 1225 aa8.92□□□□□ -0.98
FN1-213ENST00000456923 SOS2Q07890 1332 aaPredicted RBP8.92□□□□□ -0.98
FN1-213ENST00000456923 PNNQ9H307 717 aaKnown RBP8.91□□□□□ -0.98
FN1-213ENST00000456923 GTF2E1P29083 439 aaPredicted RBP8.91□□□□□ -0.98
FN1-213ENST00000456923 CERS3Q8IU89 383 aa8.91□□□□□ -0.98
FN1-213ENST00000456923 PLEKHG2Q9H7P9 1386 aa8.91□□□□□ -0.98
FN1-213ENST00000456923 CPSF1Q10570 1443 aaKnown RBP8.9□□□□□ -0.98
FN1-213ENST00000456923 B4GALNT3Q6L9W6 998 aa8.9□□□□□ -0.98
FN1-213ENST00000456923 THSD7AQ9UPZ6 1657 aa8.9□□□□□ -0.99
FN1-213ENST00000456923 SPATA31A6Q5VVP1 1343 aa8.89□□□□□ -0.99
FN1-213ENST00000456923 CD163L1Q9NR16 1453 aa8.89□□□□□ -0.99
FN1-213ENST00000456923 JCADQ9P266 1359 aa8.88□□□□□ -0.99
FN1-213ENST00000456923 PPP1R15AO75807 674 aaPredicted RBP8.88□□□□□ -0.99
FN1-213ENST00000456923 ANP32BQ92688 251 aaKnown RBP8.88□□□□□ -0.99
FN1-213ENST00000456923 PARP4Q9UKK3 1724 aaKnown RBP8.87□□□□□ -0.99
FN1-213ENST00000456923 TNS3Q68CZ2 1445 aa8.87□□□□□ -0.99
FN1-213ENST00000456923 RRP9O43818 475 aaKnown RBP8.87□□□□□ -0.99
FN1-213ENST00000456923 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.87□□□□□ -0.993e-7■■□□□ 13
FN1-213ENST00000456923 NFAT5O94916 1531 aa8.87□□□□□ -0.99
FN1-213ENST00000456923 PNPLA6Q8IY17 1366 aa8.86□□□□□ -0.99
FN1-213ENST00000456923 PLEKHH1Q9ULM0 1364 aa8.86□□□□□ -0.99
FN1-213ENST00000456923 LRP6O75581 1613 aa8.86□□□□□ -0.99
FN1-213ENST00000456923 APPP05067 770 aa8.86□□□□□ -0.99
FN1-213ENST00000456923 USP31Q70CQ4 1352 aa8.86□□□□□ -0.99
FN1-213ENST00000456923 PLEKHG3A1L390 1219 aa8.85□□□□□ -0.99
FN1-213ENST00000456923 IPO4Q8TEX9 1081 aaKnown RBP8.85□□□□□ -0.99
FN1-213ENST00000456923 FRAT1Q92837 279 aaPredicted RBP8.85□□□□□ -0.99
FN1-213ENST00000456923 PROSER2Q86WR7 435 aaPredicted RBP8.85□□□□□ -0.99
FN1-213ENST00000456923 SLC26A8Q96RN1 970 aa8.85□□□□□ -0.99
FN1-213ENST00000456923 SLIT2O94813 1529 aa8.85□□□□□ -0.99
FN1-213ENST00000456923 SLAIN2Q9P270 581 aa8.84□□□□□ -0.99
FN1-213ENST00000456923 GSE1Q14687 1217 aa8.84□□□□□ -0.99
FN1-213ENST00000456923 ILDR1Q86SU0 546 aaPredicted RBP8.84□□□□□ -0.99
FN1-213ENST00000456923 ATAD2Q6PL18 1390 aa8.84□□□□□ -0.99
FN1-213ENST00000456923 L3MBTL2Q969R5 705 aa8.84□□□□□ -0.99
FN1-213ENST00000456923 BRINP3Q76B58 766 aa8.83□□□□□ -1
FN1-213ENST00000456923 ARHGEF10O15013 1369 aa8.83□□□□□ -1
FN1-213ENST00000456923 TPRNQ4KMQ1 711 aa8.83□□□□□ -1
FN1-213ENST00000456923 DNTTIP2Q5QJE6 756 aaKnown RBP8.83□□□□□ -1
FN1-213ENST00000456923 ZNF830Q96NB3 372 aaPredicted RBP8.83□□□□□ -1
FN1-213ENST00000456923 SOX12O15370 315 aa8.83□□□□□ -1
FN1-213ENST00000456923 USP19O94966 1318 aa8.83□□□□□ -1
FN1-213ENST00000456923 PEAK1Q9H792 1746 aa8.83□□□□□ -1
FN1-213ENST00000456923 CPDO75976 1380 aa8.83□□□□□ -1
FN1-213ENST00000456923 CICQ96RK0 1608 aaPredicted RBP8.82□□□□□ -1
FN1-213ENST00000456923 LTN1O94822 1766 aa8.82□□□□□ -1
FN1-213ENST00000456923 CFAP70Q5T0N1 1121 aa8.82□□□□□ -1
FN1-213ENST00000456923 FTSJ3Q8IY81 847 aaKnown RBP8.82□□□□□ -1
FN1-213ENST00000456923 ZBTB9Q96C00 473 aa8.82□□□□□ -1
FN1-213ENST00000456923 ATRNO75882 1429 aa8.81□□□□□ -1
FN1-213ENST00000456923 NCAPD2Q15021 1401 aa8.81□□□□□ -1
FN1-213ENST00000456923 SMG6Q86US8 1419 aaKnown RBP8.81□□□□□ -1
FN1-213ENST00000456923 USP6P35125 1406 aa8.81□□□□□ -1
FN1-213ENST00000456923 TONSLQ96HA7 1378 aa8.81□□□□□ -1
FN1-213ENST00000456923 WASLO00401 505 aaPredicted RBP8.81□□□□□ -1
FN1-213ENST00000456923 SLC4A3P48751 1232 aa8.8□□□□□ -1
FN1-213ENST00000456923 IPO9Q96P70 1041 aaKnown RBP8.8□□□□□ -1
FN1-213ENST00000456923 RGPD1P0DJD0 1748 aa8.8□□□□□ -1
FN1-213ENST00000456923 NPHP3Q7Z494 1330 aa8.8□□□□□ -1
FN1-213ENST00000456923 DCAF11Q8TEB1 546 aa8.8□□□□□ -1
FN1-213ENST00000456923 ZNF831Q5JPB2 1677 aa8.8□□□□□ -1
FN1-213ENST00000456923 CENPJQ9HC77 1338 aaPredicted RBP8.8□□□□□ -1
FN1-213ENST00000456923 ROCK2O75116 1388 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms