RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 RSPH4AQ5TD94 716 aa14.72□□□□□ -0.05
NEDD4L-208ENST00000456173 ZKSCAN5Q9Y2L8 839 aa14.72□□□□□ -0.05
NEDD4L-208ENST00000456173 ANKRD30AQ9BXX3 1397 aa14.71□□□□□ -0.05
NEDD4L-208ENST00000456173 NOLC1Q14978 699 aaKnown RBP eCLIP14.71□□□□□ -0.05
NEDD4L-208ENST00000456173 SYNE3Q6ZMZ3 975 aa14.71□□□□□ -0.05
NEDD4L-208ENST00000456173 HOOK1Q9UJC3 728 aaKnown RBP14.71□□□□□ -0.05
NEDD4L-208ENST00000456173 CAMK4Q16566 473 aa14.71□□□□□ -0.05
NEDD4L-208ENST00000456173 SERPINC1P01008 464 aa14.71□□□□□ -0.06
NEDD4L-208ENST00000456173 MNAT1P51948 309 aa14.71□□□□□ -0.06
NEDD4L-208ENST00000456173 TICAM2Q86XR7 235 aa14.7□□□□□ -0.06
NEDD4L-208ENST00000456173 KIF20AO95235 890 aa14.7□□□□□ -0.06
NEDD4L-208ENST00000456173 NUP62CLQ9H1M0 184 aa14.7□□□□□ -0.06
NEDD4L-208ENST00000456173 ZSCAN23Q3MJ62 389 aa14.7□□□□□ -0.06
NEDD4L-208ENST00000456173 KLHL40Q2TBA0 621 aa14.69□□□□□ -0.06
NEDD4L-208ENST00000456173 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.69□□□□□ -0.061e-6■□□□□ 10.1
NEDD4L-208ENST00000456173 TCP11L2Q8N4U5 519 aa14.69□□□□□ -0.06
NEDD4L-208ENST00000456173 CHMP4CQ96CF2 233 aa14.69□□□□□ -0.06
NEDD4L-208ENST00000456173 URI1O94763 535 aaPredicted RBP14.69□□□□□ -0.06
NEDD4L-208ENST00000456173 BAG4O95429 457 aaKnown RBP14.69□□□□□ -0.06
NEDD4L-208ENST00000456173 BRPF1P55201 1214 aaPredicted RBP14.69□□□□□ -0.06
NEDD4L-208ENST00000456173 BMS1Q14692 1282 aaKnown RBP14.69□□□□□ -0.06
NEDD4L-208ENST00000456173 LRRCC1Q9C099 1032 aa14.68□□□□□ -0.06
NEDD4L-208ENST00000456173 TRAK1Q9UPV9 953 aa14.68□□□□□ -0.06
NEDD4L-208ENST00000456173 RAD54L2Q9Y4B4 1467 aa14.68□□□□□ -0.06
NEDD4L-208ENST00000456173 HDAC5Q9UQL6 1122 aa14.68□□□□□ -0.06
NEDD4L-208ENST00000456173 CHD1LQ86WJ1 897 aa14.68□□□□□ -0.06
NEDD4L-208ENST00000456173 EXOSC9Q06265 439 aaKnown RBP14.67□□□□□ -0.06
NEDD4L-208ENST00000456173 TRIM29Q14134 588 aa14.67□□□□□ -0.06
NEDD4L-208ENST00000456173 TERF2IPQ9NYB0 399 aa14.67□□□□□ -0.06
NEDD4L-208ENST00000456173 FHOD3Q2V2M9 1422 aa14.67□□□□□ -0.06
NEDD4L-208ENST00000456173 KRT85P78386 507 aa14.67□□□□□ -0.06
NEDD4L-208ENST00000456173 IFIT2P09913 472 aaKnown RBP14.67□□□□□ -0.06
NEDD4L-208ENST00000456173 NECTIN2Q92692 538 aa14.67□□□□□ -0.06
NEDD4L-208ENST00000456173 GDPD2Q9HCC8 539 aa14.67□□□□□ -0.06
NEDD4L-208ENST00000456173 PPP2R1AP30153 589 aa14.67□□□□□ -0.06
NEDD4L-208ENST00000456173 GCC1Q96CN9 775 aa14.67□□□□□ -0.06
NEDD4L-208ENST00000456173 ERC2O15083 957 aa14.66□□□□□ -0.06
NEDD4L-208ENST00000456173 PDCP20941 246 aa14.66□□□□□ -0.06
NEDD4L-208ENST00000456173 CPLX2Q6PUV4 134 aaKnown RBP14.66□□□□□ -0.06
NEDD4L-208ENST00000456173 DNAAF4Q8WXU2 420 aa14.66□□□□□ -0.06
NEDD4L-208ENST00000456173 MAP3K11Q16584 847 aa14.66□□□□□ -0.06
NEDD4L-208ENST00000456173 DYDC1Q8WWB3 177 aa14.66□□□□□ -0.06
NEDD4L-208ENST00000456173 TTC12Q9H892 705 aaPredicted RBP14.66□□□□□ -0.06
NEDD4L-208ENST00000456173 NOB1Q9ULX3 412 aaKnown RBP14.66□□□□□ -0.06
NEDD4L-208ENST00000456173 UACAQ9BZF9 1416 aa14.66□□□□□ -0.06
NEDD4L-208ENST00000456173 MVPQ14764 893 aaKnown RBP14.66□□□□□ -0.06
NEDD4L-208ENST00000456173 C10orf67Q8IYJ2 551 aa14.66□□□□□ -0.06
NEDD4L-208ENST00000456173 TBC1D32Q96NH3 1257 aa14.66□□□□□ -0.06
NEDD4L-208ENST00000456173 CCDC183Q5T5S1 534 aa14.65□□□□□ -0.06
NEDD4L-208ENST00000456173 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.65□□□□□ -0.06
NEDD4L-208ENST00000456173 V9GYY5 206 aaPredicted RBP14.65□□□□□ -0.06
NEDD4L-208ENST00000456173 KIF2AO00139 706 aaPredicted RBP14.65□□□□□ -0.06
NEDD4L-208ENST00000456173 CT47A1Q5JQC4 288 aaPredicted RBP14.65□□□□□ -0.06
NEDD4L-208ENST00000456173 TSR2Q969E8 191 aaKnown RBP14.65□□□□□ -0.06
NEDD4L-208ENST00000456173 NBPF8Q3BBV2 869 aa14.65□□□□□ -0.06
NEDD4L-208ENST00000456173 CLIP2Q9UDT6 1046 aa14.65□□□□□ -0.06
NEDD4L-208ENST00000456173 SHTN1A0MZ66 631 aa14.65□□□□□ -0.06
NEDD4L-208ENST00000456173 TXLNBQ8N3L3 684 aa14.64□□□□□ -0.07
NEDD4L-208ENST00000456173 ZNF330Q9Y3S2 320 aaPredicted RBP14.64□□□□□ -0.07
NEDD4L-208ENST00000456173 KANK1Q14678 1352 aa14.64□□□□□ -0.07
NEDD4L-208ENST00000456173 LARP1BQ659C4 914 aaKnown RBP14.63□□□□□ -0.07
NEDD4L-208ENST00000456173 SPATA32Q96LK8 384 aa14.63□□□□□ -0.07
NEDD4L-208ENST00000456173 AKAP17AQ02040 695 aaKnown RBP14.63□□□□□ -0.07
NEDD4L-208ENST00000456173 KDM4AO75164 1064 aa14.63□□□□□ -0.07
NEDD4L-208ENST00000456173 C8orf34Q49A92 452 aa14.63□□□□□ -0.07
NEDD4L-208ENST00000456173 SFPQP23246 707 aaKnown RBP eCLIP14.62□□□□□ -0.073e-7■□□□□ 11.1
NEDD4L-208ENST00000456173 CEP135Q66GS9 1140 aa14.62□□□□□ -0.07
NEDD4L-208ENST00000456173 UPF3BQ9BZI7 483 aaKnown RBP14.62□□□□□ -0.07
NEDD4L-208ENST00000456173 ROCK1Q13464 1354 aa14.62□□□□□ -0.07
NEDD4L-208ENST00000456173 CEP57L1Q8IYX8 460 aa14.62□□□□□ -0.07
NEDD4L-208ENST00000456173 GOLGA6L10A6NI86 522 aa14.62□□□□□ -0.07
NEDD4L-208ENST00000456173 HCLS1P14317 486 aaPredicted RBP14.62□□□□□ -0.07
NEDD4L-208ENST00000456173 ME1P48163 572 aa14.62□□□□□ -0.07
NEDD4L-208ENST00000456173 STK3Q13188 491 aa14.62□□□□□ -0.07
NEDD4L-208ENST00000456173 NUTM2DQ5VT03 806 aaPredicted RBP14.62□□□□□ -0.07
NEDD4L-208ENST00000456173 CRACR2AQ9BSW2 395 aa14.62□□□□□ -0.07
NEDD4L-208ENST00000456173 GOLGA6L7A0A1B0GV03 622 aa14.62□□□□□ -0.07
NEDD4L-208ENST00000456173 LRSAM1Q6UWE0 723 aa14.62□□□□□ -0.07
NEDD4L-208ENST00000456173 SMARCE1Q969G3 411 aa14.62□□□□□ -0.07
NEDD4L-208ENST00000456173 TMX1Q9H3N1 280 aa14.62□□□□□ -0.07
NEDD4L-208ENST00000456173 RSPH14Q9UHP6 348 aa14.62□□□□□ -0.07
NEDD4L-208ENST00000456173 PRIM1P49642 420 aaKnown RBP14.61□□□□□ -0.07
NEDD4L-208ENST00000456173 FKBP5Q13451 457 aaPredicted RBP14.61□□□□□ -0.07
NEDD4L-208ENST00000456173 CCDC144AA2RUR9 1427 aa14.61□□□□□ -0.07
NEDD4L-208ENST00000456173 MEX3CQ5U5Q3 659 aaKnown RBP14.61□□□□□ -0.07
NEDD4L-208ENST00000456173 FERMT3Q86UX7 667 aa14.61□□□□□ -0.07
NEDD4L-208ENST00000456173 OGFRQ9NZT2 677 aa14.61□□□□□ -0.07
NEDD4L-208ENST00000456173 RNF187Q5TA31 235 aaPredicted RBP14.61□□□□□ -0.07
NEDD4L-208ENST00000456173 DHX8Q14562 1220 aaKnown RBP14.61□□□□□ -0.07
NEDD4L-208ENST00000456173 CKAP2LQ8IYA6 745 aa14.61□□□□□ -0.07
NEDD4L-208ENST00000456173 RASSF4Q9H2L5 321 aa14.61□□□□□ -0.07
NEDD4L-208ENST00000456173 U2AF2P26368 475 aaKnown RBP eCLIP14.6□□□□□ -0.072e-6■■■■■ 27.9
NEDD4L-208ENST00000456173 STK38Q15208 465 aa14.6□□□□□ -0.07
NEDD4L-208ENST00000456173 JAKMIP3Q5VZ66 844 aa14.6□□□□□ -0.07
NEDD4L-208ENST00000456173 PAXBP1Q9Y5B6 917 aa14.6□□□□□ -0.07
NEDD4L-208ENST00000456173 IGHDP01880 384 aa14.6□□□□□ -0.07
NEDD4L-208ENST00000456173 PSMA5P28066 241 aa14.6□□□□□ -0.07
NEDD4L-208ENST00000456173 ODF2Q5BJF6 829 aa14.6□□□□□ -0.07
NEDD4L-208ENST00000456173 DDX11Q96FC9 970 aa14.6□□□□□ -0.07
NEDD4L-208ENST00000456173 DIAPH1O60610 1272 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms