RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 NGDNQ8NEJ9 315 aaKnown RBP27.33■■□□□ 1.97
COL20A1-204ENST00000455906 CCDC9Q9Y3X0 531 aaKnown RBP27.33■■□□□ 1.97
COL20A1-204ENST00000455906 NUDT16Q96DE0 195 aaKnown RBP27.31■■□□□ 1.96
COL20A1-204ENST00000455906 BTG4Q9NY30 223 aa27.3■■□□□ 1.96
COL20A1-204ENST00000455906 ZRANB1Q9UGI0 708 aa27.3■■□□□ 1.96
COL20A1-204ENST00000455906 TOPAZ1Q8N9V7 1692 aa27.29■■□□□ 1.96
COL20A1-204ENST00000455906 PAK3O75914 559 aaPredicted RBP27.27■■□□□ 1.96
COL20A1-204ENST00000455906 KRT27Q7Z3Y8 459 aa27.27■■□□□ 1.96
COL20A1-204ENST00000455906 CDK19Q9BWU1 502 aa27.27■■□□□ 1.96
COL20A1-204ENST00000455906 PHRF1Q9P1Y6 1649 aaKnown RBP27.24■■□□□ 1.95
COL20A1-204ENST00000455906 FAM98CQ17RN3 349 aaKnown RBP27.24■■□□□ 1.95
COL20A1-204ENST00000455906 POLR3AO14802 1390 aaPredicted RBP27.23■■□□□ 1.95
COL20A1-204ENST00000455906 NBPF1Q3BBV0 1214 aa27.23■■□□□ 1.95
COL20A1-204ENST00000455906 DEFB132Q7Z7B7 95 aa27.23■■□□□ 1.95
COL20A1-204ENST00000455906 SPATA31A5Q5VU36 1347 aa27.2■■□□□ 1.95
COL20A1-204ENST00000455906 SPATA31A7Q8IWB4 1347 aa27.2■■□□□ 1.95
COL20A1-204ENST00000455906 PRDM11Q9NQV5 511 aa27.2■■□□□ 1.94
COL20A1-204ENST00000455906 CCDC61Q9Y6R9 512 aa27.2■■□□□ 1.94
COL20A1-204ENST00000455906 ACEP12821 1306 aa27.19■■□□□ 1.94
COL20A1-204ENST00000455906 A0A0G2JS52 829 aa27.19■■□□□ 1.94
COL20A1-204ENST00000455906 MYT1Q01538 1121 aa27.19■■□□□ 1.94
COL20A1-204ENST00000455906 KIAA0232Q92628 1395 aa27.19■■□□□ 1.94
COL20A1-204ENST00000455906 THSD7AQ9UPZ6 1657 aa27.18■■□□□ 1.94
COL20A1-204ENST00000455906 PLEKHG3A1L390 1219 aa27.18■■□□□ 1.94
COL20A1-204ENST00000455906 SF3B2Q13435 895 aaKnown RBP27.18■■□□□ 1.94
COL20A1-204ENST00000455906 NBPF8Q3BBV2 869 aa27.18■■□□□ 1.94
COL20A1-204ENST00000455906 NUTM2GQ5VZR2 741 aa27.15■■□□□ 1.94
COL20A1-204ENST00000455906 CHRNA2Q15822 529 aa27.14■■□□□ 1.94
COL20A1-204ENST00000455906 NRKQ7Z2Y5 1582 aa27.13■■□□□ 1.93
COL20A1-204ENST00000455906 CENPJQ9HC77 1338 aaPredicted RBP27.13■■□□□ 1.93
COL20A1-204ENST00000455906 ZC3H6P61129 1189 aaKnown RBP27.12■■□□□ 1.93
COL20A1-204ENST00000455906 QRICH2Q9H0J4 1663 aa27.11■■□□□ 1.93
COL20A1-204ENST00000455906 SPATA31A1Q5TZJ5 1347 aa27.11■■□□□ 1.93
COL20A1-204ENST00000455906 RGPD1P0DJD0 1748 aa27.1■■□□□ 1.93
COL20A1-204ENST00000455906 PPIP5K1Q6PFW1 1433 aa27.09■■□□□ 1.93
COL20A1-204ENST00000455906 FAM182BQ5T319 152 aa27.09■■□□□ 1.93
COL20A1-204ENST00000455906 SRPK2P78362 688 aaKnown RBP27.08■■□□□ 1.93
COL20A1-204ENST00000455906 ABTB2Q8N961 1025 aa27.08■■□□□ 1.93
COL20A1-204ENST00000455906 USP19O94966 1318 aa27.08■■□□□ 1.93
COL20A1-204ENST00000455906 L3MBTL2Q969R5 705 aa27.07■■□□□ 1.92
COL20A1-204ENST00000455906 CABP2Q9NPB3 220 aa27.07■■□□□ 1.92
COL20A1-204ENST00000455906 STRN4Q9NRL3 753 aa27.07■■□□□ 1.92
COL20A1-204ENST00000455906 LMO7Q8WWI1 1683 aa27.07■■□□□ 1.92
COL20A1-204ENST00000455906 BAG6P46379 1132 aa27.06■■□□□ 1.92
COL20A1-204ENST00000455906 CAMTA1Q9Y6Y1 1673 aa27.05■■□□□ 1.92
COL20A1-204ENST00000455906 TNS1Q9HBL0 1735 aaKnown RBP27.05■■□□□ 1.92
COL20A1-204ENST00000455906 CPDO75976 1380 aa27.05■■□□□ 1.92
COL20A1-204ENST00000455906 SSH2Q76I76 1423 aa27.05■■□□□ 1.92
COL20A1-204ENST00000455906 TRPM1Q7Z4N2 1603 aa27.04■■□□□ 1.92
COL20A1-204ENST00000455906 DISP2A7MBM2 1401 aa27.01■■□□□ 1.91
COL20A1-204ENST00000455906 BRD4O60885 1362 aaPredicted RBP27■■□□□ 1.91
COL20A1-204ENST00000455906 EN1Q05925 392 aaPredicted RBP27■■□□□ 1.91
COL20A1-204ENST00000455906 NLRP13Q86W25 1043 aa27■■□□□ 1.91
COL20A1-204ENST00000455906 SIN3AQ96ST3 1273 aa27■■□□□ 1.91
COL20A1-204ENST00000455906 USP6P35125 1406 aa26.99■■□□□ 1.91
COL20A1-204ENST00000455906 GCP02774 474 aa26.99■■□□□ 1.91
COL20A1-204ENST00000455906 CABP1Q9NZU7 370 aa26.99■■□□□ 1.91
COL20A1-204ENST00000455906 LRP5O75197 1615 aa26.98■■□□□ 1.91
COL20A1-204ENST00000455906 EVA1CP58658 441 aa26.98■■□□□ 1.91
COL20A1-204ENST00000455906 LARP1Q6PKG0 1096 aaKnown RBP26.98■■□□□ 1.91
COL20A1-204ENST00000455906 BARGINQ6ZT62 677 aa26.98■■□□□ 1.91
COL20A1-204ENST00000455906 USP35Q9P2H5 1018 aa26.98■■□□□ 1.91
COL20A1-204ENST00000455906 PSDA5PKW4 1024 aaPredicted RBP26.95■■□□□ 1.9
COL20A1-204ENST00000455906 SLIT3O75094 1523 aa26.95■■□□□ 1.9
COL20A1-204ENST00000455906 COL5A2P05997 1499 aaPredicted RBP26.94■■□□□ 1.9
COL20A1-204ENST00000455906 FAM196AQ6ZSG2 479 aa26.94■■□□□ 1.9
COL20A1-204ENST00000455906 PIK3C2AO00443 1686 aa26.94■■□□□ 1.9
COL20A1-204ENST00000455906 EVC2Q86UK5 1308 aa26.92■■□□□ 1.9
COL20A1-204ENST00000455906 TCP11L2Q8N4U5 519 aa26.92■■□□□ 1.9
COL20A1-204ENST00000455906 TRIM37O94972 964 aa26.91■■□□□ 1.9
COL20A1-204ENST00000455906 ROCK2O75116 1388 aaKnown RBP26.91■■□□□ 1.9
COL20A1-204ENST00000455906 NLRP6P59044 892 aa26.9■■□□□ 1.9
COL20A1-204ENST00000455906 NEUROD1Q13562 356 aa26.9■■□□□ 1.9
COL20A1-204ENST00000455906 EZH2Q15910 746 aaKnown RBP26.9■■□□□ 1.9
COL20A1-204ENST00000455906 PARP4Q9UKK3 1724 aaKnown RBP26.9■■□□□ 1.9
COL20A1-204ENST00000455906 CAMKK2Q96RR4 588 aa26.89■■□□□ 1.9
COL20A1-204ENST00000455906 THRAP3Q9Y2W1 955 aaKnown RBP26.89■■□□□ 1.9
COL20A1-204ENST00000455906 COL18A1P39060 1754 aa26.89■■□□□ 1.89
COL20A1-204ENST00000455906 AKAP12Q02952 1782 aa26.89■■□□□ 1.89
COL20A1-204ENST00000455906 PDE3BQ13370 1112 aa26.88■■□□□ 1.89
COL20A1-204ENST00000455906 AATKQ6ZMQ8 1374 aa26.87■■□□□ 1.89
COL20A1-204ENST00000455906 CRB1P82279 1406 aa26.87■■□□□ 1.89
COL20A1-204ENST00000455906 APBA3O96018 575 aa26.84■■□□□ 1.89
COL20A1-204ENST00000455906 R3HDM1Q15032 1099 aaKnown RBP26.84■■□□□ 1.89
COL20A1-204ENST00000455906 RREB1Q92766 1687 aa26.84■■□□□ 1.89
COL20A1-204ENST00000455906 PARD3Q8TEW0 1356 aa26.84■■□□□ 1.89
COL20A1-204ENST00000455906 ZBTB7CA1YPR0 619 aa26.83■■□□□ 1.89
COL20A1-204ENST00000455906 TTC21BQ7Z4L5 1316 aa26.83■■□□□ 1.89
COL20A1-204ENST00000455906 CPSF1Q10570 1443 aaKnown RBP26.82■■□□□ 1.88
COL20A1-204ENST00000455906 ZNF692Q9BU19 519 aaPredicted RBP26.81■■□□□ 1.88
COL20A1-204ENST00000455906 PEAK1Q9H792 1746 aa26.81■■□□□ 1.88
COL20A1-204ENST00000455906 LRRC37A3O60309 1634 aa26.79■■□□□ 1.88
COL20A1-204ENST00000455906 NUP188Q5SRE5 1749 aa26.79■■□□□ 1.88
COL20A1-204ENST00000455906 AXIN2Q9Y2T1 843 aa26.79■■□□□ 1.88
COL20A1-204ENST00000455906 WNK3Q9BYP7 1800 aa26.79■■□□□ 1.88
COL20A1-204ENST00000455906 RGPD5Q99666 1765 aa26.78■■□□□ 1.88
COL20A1-204ENST00000455906 MON2Q7Z3U7 1717 aa26.77■■□□□ 1.88
COL20A1-204ENST00000455906 SBNO2Q9Y2G9 1366 aa26.77■■□□□ 1.88
COL20A1-204ENST00000455906 TTC21AQ8NDW8 1320 aa26.77■■□□□ 1.88
COL20A1-204ENST00000455906 ARHGEF25Q86VW2 580 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms