RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 QRICH2Q9H0J4 1663 aa17.23■□□□□ 0.35
PDGFB-204ENST00000455790 FAM83GA6ND36 823 aa17.23■□□□□ 0.35
PDGFB-204ENST00000455790 NRAPQ86VF7 1730 aa17.22■□□□□ 0.35
PDGFB-204ENST00000455790 PAK3O75914 559 aaPredicted RBP17.22■□□□□ 0.35
PDGFB-204ENST00000455790 POLR3AO14802 1390 aaPredicted RBP17.22■□□□□ 0.35
PDGFB-204ENST00000455790 ACEP12821 1306 aa17.21■□□□□ 0.34
PDGFB-204ENST00000455790 VPS72Q15906 364 aa17.2■□□□□ 0.34
PDGFB-204ENST00000455790 CCDC61Q9Y6R9 512 aa17.2■□□□□ 0.34
PDGFB-204ENST00000455790 PHRF1Q9P1Y6 1649 aaKnown RBP17.19■□□□□ 0.34
PDGFB-204ENST00000455790 COL14A1Q05707 1796 aaKnown RBP17.19■□□□□ 0.34
PDGFB-204ENST00000455790 PLEKHG3A1L390 1219 aa17.18■□□□□ 0.34
PDGFB-204ENST00000455790 SRPK2P78362 688 aaKnown RBP17.18■□□□□ 0.34
PDGFB-204ENST00000455790 NUTM2GQ5VZR2 741 aa17.18■□□□□ 0.34
PDGFB-204ENST00000455790 CABP2Q9NPB3 220 aa17.18■□□□□ 0.34
PDGFB-204ENST00000455790 PPIP5K1Q6PFW1 1433 aa17.18■□□□□ 0.34
PDGFB-204ENST00000455790 ROCK2O75116 1388 aaKnown RBP17.17■□□□□ 0.34
PDGFB-204ENST00000455790 NBPF8Q3BBV2 869 aa17.17■□□□□ 0.34
PDGFB-204ENST00000455790 BTG4Q9NY30 223 aa17.17■□□□□ 0.34
PDGFB-204ENST00000455790 BRWD3Q6RI45 1802 aa17.17■□□□□ 0.34
PDGFB-204ENST00000455790 CCDC9Q9Y3X0 531 aaKnown RBP17.16■□□□□ 0.34
PDGFB-204ENST00000455790 SEPT12Q8IYM1 358 aa17.15■□□□□ 0.34
PDGFB-204ENST00000455790 NRKQ7Z2Y5 1582 aa17.15■□□□□ 0.34
PDGFB-204ENST00000455790 KIAA0232Q92628 1395 aa17.15■□□□□ 0.34
PDGFB-204ENST00000455790 PRDM11Q9NQV5 511 aa17.14■□□□□ 0.33
PDGFB-204ENST00000455790 CHRNA2Q15822 529 aa17.13■□□□□ 0.33
PDGFB-204ENST00000455790 ONECUT3O60422 494 aaPredicted RBP17.11■□□□□ 0.33
PDGFB-204ENST00000455790 ZC3H6P61129 1189 aaKnown RBP17.11■□□□□ 0.33
PDGFB-204ENST00000455790 FAM98CQ17RN3 349 aaKnown RBP17.11■□□□□ 0.33
PDGFB-204ENST00000455790 CABP1Q9NZU7 370 aa17.11■□□□□ 0.33
PDGFB-204ENST00000455790 USP19O94966 1318 aa17.11■□□□□ 0.33
PDGFB-204ENST00000455790 USP6P35125 1406 aa17.11■□□□□ 0.33
PDGFB-204ENST00000455790 ABTB2Q8N961 1025 aa17.1■□□□□ 0.33
PDGFB-204ENST00000455790 SRCAPQ6ZRS2 3230 aa17.09■□□□□ 0.33
PDGFB-204ENST00000455790 SPATA31A5Q5VU36 1347 aa17.09■□□□□ 0.33
PDGFB-204ENST00000455790 EVC2Q86UK5 1308 aa17.09■□□□□ 0.33
PDGFB-204ENST00000455790 SPATA31A7Q8IWB4 1347 aa17.09■□□□□ 0.33
PDGFB-204ENST00000455790 THSD7AQ9UPZ6 1657 aa17.08■□□□□ 0.32
PDGFB-204ENST00000455790 TONSLQ96HA7 1378 aa17.08■□□□□ 0.32
PDGFB-204ENST00000455790 A0A0G2JS52 829 aa17.08■□□□□ 0.32
PDGFB-204ENST00000455790 MYT1Q01538 1121 aa17.08■□□□□ 0.32
PDGFB-204ENST00000455790 BLMP54132 1417 aaPredicted RBP17.07■□□□□ 0.32
PDGFB-204ENST00000455790 SSH2Q76I76 1423 aa17.07■□□□□ 0.32
PDGFB-204ENST00000455790 TRIM26Q12899 539 aaPredicted RBP17.07■□□□□ 0.32
PDGFB-204ENST00000455790 KRT27Q7Z3Y8 459 aa17.07■□□□□ 0.32
PDGFB-204ENST00000455790 PIK3C2AO00443 1686 aa17.07■□□□□ 0.32
PDGFB-204ENST00000455790 LMO7Q8WWI1 1683 aa17.07■□□□□ 0.32
PDGFB-204ENST00000455790 CAMTA1Q9Y6Y1 1673 aa17.06■□□□□ 0.32
PDGFB-204ENST00000455790 CPDO75976 1380 aa17.05■□□□□ 0.32
PDGFB-204ENST00000455790 STRN4Q9NRL3 753 aa17.05■□□□□ 0.32
PDGFB-204ENST00000455790 BRD4O60885 1362 aaPredicted RBP17.04■□□□□ 0.32
PDGFB-204ENST00000455790 SPATA31A1Q5TZJ5 1347 aa17.04■□□□□ 0.32
PDGFB-204ENST00000455790 CCDC125Q86Z20 511 aa17.04■□□□□ 0.32
PDGFB-204ENST00000455790 CARD11Q9BXL7 1154 aa17.04■□□□□ 0.32
PDGFB-204ENST00000455790 SLIT3O75094 1523 aa17.04■□□□□ 0.32
PDGFB-204ENST00000455790 SBNO2Q9Y2G9 1366 aa17.03■□□□□ 0.32
PDGFB-204ENST00000455790 GCP02774 474 aa17.03■□□□□ 0.32
PDGFB-204ENST00000455790 NLRP13Q86W25 1043 aa17.03■□□□□ 0.32
PDGFB-204ENST00000455790 AKAP12Q02952 1782 aa17.02■□□□□ 0.32
PDGFB-204ENST00000455790 FAM182BQ5T319 152 aa17.02■□□□□ 0.32
PDGFB-204ENST00000455790 DEFB132Q7Z7B7 95 aa17.02■□□□□ 0.32
PDGFB-204ENST00000455790 NLRP6P59044 892 aa17.01■□□□□ 0.31
PDGFB-204ENST00000455790 LARP1Q6PKG0 1096 aaKnown RBP17.01■□□□□ 0.31
PDGFB-204ENST00000455790 CPSF1Q10570 1443 aaKnown RBP17.01■□□□□ 0.31
PDGFB-204ENST00000455790 COL5A2P05997 1499 aaPredicted RBP17■□□□□ 0.31
PDGFB-204ENST00000455790 USP35Q9P2H5 1018 aa17■□□□□ 0.31
PDGFB-204ENST00000455790 TTC21BQ7Z4L5 1316 aa16.99■□□□□ 0.31
PDGFB-204ENST00000455790 CD163L1Q9NR16 1453 aa16.99■□□□□ 0.31
PDGFB-204ENST00000455790 ZBTB7CA1YPR0 619 aa16.98■□□□□ 0.31
PDGFB-204ENST00000455790 MON2Q7Z3U7 1717 aa16.98■□□□□ 0.31
PDGFB-204ENST00000455790 EVA1CP58658 441 aa16.97■□□□□ 0.31
PDGFB-204ENST00000455790 KTN1Q86UP2 1357 aaKnown RBP16.97■□□□□ 0.31
PDGFB-204ENST00000455790 SF3B2Q13435 895 aaKnown RBP16.96■□□□□ 0.31
PDGFB-204ENST00000455790 NFAT5O94916 1531 aa16.96■□□□□ 0.3
PDGFB-204ENST00000455790 COL18A1P39060 1754 aa16.95■□□□□ 0.3
PDGFB-204ENST00000455790 AATKQ6ZMQ8 1374 aa16.95■□□□□ 0.3
PDGFB-204ENST00000455790 ZNF692Q9BU19 519 aaPredicted RBP16.95■□□□□ 0.3
PDGFB-204ENST00000455790 ZRANB1Q9UGI0 708 aa16.95■□□□□ 0.3
PDGFB-204ENST00000455790 TNS1Q9HBL0 1735 aaKnown RBP16.95■□□□□ 0.3
PDGFB-204ENST00000455790 SOX12O15370 315 aa16.94■□□□□ 0.3
PDGFB-204ENST00000455790 BARGINQ6ZT62 677 aa16.94■□□□□ 0.3
PDGFB-204ENST00000455790 TCP11L2Q8N4U5 519 aa16.94■□□□□ 0.3
PDGFB-204ENST00000455790 TTC21AQ8NDW8 1320 aa16.94■□□□□ 0.3
PDGFB-204ENST00000455790 RGPD1P0DJD0 1748 aa16.93■□□□□ 0.3
PDGFB-204ENST00000455790 CRB1P82279 1406 aa16.93■□□□□ 0.3
PDGFB-204ENST00000455790 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.92■□□□□ 0.3
PDGFB-204ENST00000455790 TESK2Q96S53 571 aa16.92■□□□□ 0.3
PDGFB-204ENST00000455790 AXIN2Q9Y2T1 843 aa16.92■□□□□ 0.3
PDGFB-204ENST00000455790 ST20-MTHFSA0A0A6YYL1 179 aa16.91■□□□□ 0.3
PDGFB-204ENST00000455790 ARHGEF25Q86VW2 580 aa16.91■□□□□ 0.3
PDGFB-204ENST00000455790 TMC1Q8TDI8 760 aa16.91■□□□□ 0.3
PDGFB-204ENST00000455790 SLC12A5Q9H2X9 1139 aa16.91■□□□□ 0.3
PDGFB-204ENST00000455790 USP54Q70EL1 1684 aa16.91■□□□□ 0.3
PDGFB-204ENST00000455790 A0A1W2PP64 1363 aa16.9■□□□□ 0.3
PDGFB-204ENST00000455790 PARP4Q9UKK3 1724 aaKnown RBP16.9■□□□□ 0.3
PDGFB-204ENST00000455790 BAG6P46379 1132 aa16.9■□□□□ 0.3
PDGFB-204ENST00000455790 NME9Q86XW9 330 aa16.9■□□□□ 0.3
PDGFB-204ENST00000455790 LRRC37A3O60309 1634 aa16.89■□□□□ 0.29
PDGFB-204ENST00000455790 DISP2A7MBM2 1401 aa16.89■□□□□ 0.29
PDGFB-204ENST00000455790 EN1Q05925 392 aaPredicted RBP16.89■□□□□ 0.29
PDGFB-204ENST00000455790 USP31Q70CQ4 1352 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms