RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 USP6P35125 1406 aa20.54■□□□□ 0.88
CLCN1-203ENST00000455478 CDCA8Q53HL2 280 aa20.54■□□□□ 0.88
CLCN1-203ENST00000455478 CD163L1Q9NR16 1453 aa20.54■□□□□ 0.88
CLCN1-203ENST00000455478 SSH2Q76I76 1423 aa20.53■□□□□ 0.88
CLCN1-203ENST00000455478 BRD4O60885 1362 aaPredicted RBP20.52■□□□□ 0.88
CLCN1-203ENST00000455478 CABLES1Q8TDN4 633 aa20.52■□□□□ 0.88
CLCN1-203ENST00000455478 KTN1Q86UP2 1357 aaKnown RBP20.5■□□□□ 0.87
CLCN1-203ENST00000455478 NINLQ9Y2I6 1382 aa20.5■□□□□ 0.87
CLCN1-203ENST00000455478 C11orf95C9JLR9 678 aaPredicted RBP20.5■□□□□ 0.87
CLCN1-203ENST00000455478 PLEKHG5O94827 1062 aa20.49■□□□□ 0.87
CLCN1-203ENST00000455478 ADAMTS2O95450 1211 aa20.49■□□□□ 0.87
CLCN1-203ENST00000455478 MEX3CQ5U5Q3 659 aaKnown RBP20.49■□□□□ 0.87
CLCN1-203ENST00000455478 NUTM2GQ5VZR2 741 aa20.49■□□□□ 0.87
CLCN1-203ENST00000455478 HDGFL2Q7Z4V5 671 aaPredicted RBP20.49■□□□□ 0.87
CLCN1-203ENST00000455478 ABTB2Q8N961 1025 aa20.49■□□□□ 0.87
CLCN1-203ENST00000455478 TERF2IPQ9NYB0 399 aa20.49■□□□□ 0.87
CLCN1-203ENST00000455478 TTC21BQ7Z4L5 1316 aa20.49■□□□□ 0.87
CLCN1-203ENST00000455478 MON2Q7Z3U7 1717 aa20.48■□□□□ 0.87
CLCN1-203ENST00000455478 A0A1W2PP64 1363 aa20.47■□□□□ 0.87
CLCN1-203ENST00000455478 RGS17Q9UGC6 210 aaPredicted RBP20.47■□□□□ 0.87
CLCN1-203ENST00000455478 PHF23Q9BUL5 403 aaPredicted RBP20.46■□□□□ 0.87
CLCN1-203ENST00000455478 ABCA3Q99758 1704 aa20.46■□□□□ 0.87
CLCN1-203ENST00000455478 NRKQ7Z2Y5 1582 aa20.46■□□□□ 0.87
CLCN1-203ENST00000455478 CRYBG1Q9Y4K1 1723 aa20.45■□□□□ 0.86
CLCN1-203ENST00000455478 MYOM1P52179 1685 aa20.45■□□□□ 0.86
CLCN1-203ENST00000455478 C8orf37Q96NL8 207 aa20.44■□□□□ 0.86
CLCN1-203ENST00000455478 TTC21AQ8NDW8 1320 aa20.44■□□□□ 0.86
CLCN1-203ENST00000455478 ANKRD36BQ8N2N9 1353 aa20.44■□□□□ 0.86
CLCN1-203ENST00000455478 MARF1Q9Y4F3 1742 aaKnown RBP20.44■□□□□ 0.86
CLCN1-203ENST00000455478 PIK3C2AO00443 1686 aa20.43■□□□□ 0.86
CLCN1-203ENST00000455478 HAP1P54257 671 aaPredicted RBP20.43■□□□□ 0.86
CLCN1-203ENST00000455478 NLRP13Q86W25 1043 aa20.43■□□□□ 0.86
CLCN1-203ENST00000455478 POLR3GLQ9BT43 218 aa20.43■□□□□ 0.86
CLCN1-203ENST00000455478 EDC4Q6P2E9 1401 aaKnown RBP20.43■□□□□ 0.86
CLCN1-203ENST00000455478 NLRP6P59044 892 aa20.42■□□□□ 0.86
CLCN1-203ENST00000455478 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.42■□□□□ 0.86
CLCN1-203ENST00000455478 NGLY1Q96IV0 654 aa20.42■□□□□ 0.86
CLCN1-203ENST00000455478 USP19O94966 1318 aa20.42■□□□□ 0.86
CLCN1-203ENST00000455478 AFF2P51816 1311 aa20.41■□□□□ 0.86
CLCN1-203ENST00000455478 ZEB1P37275 1124 aaPredicted RBP20.4■□□□□ 0.86
CLCN1-203ENST00000455478 CARD14Q9BXL6 1004 aa20.4■□□□□ 0.86
CLCN1-203ENST00000455478 ZRANB1Q9UGI0 708 aa20.4■□□□□ 0.86
CLCN1-203ENST00000455478 PHRF1Q9P1Y6 1649 aaKnown RBP20.39■□□□□ 0.86
CLCN1-203ENST00000455478 KIF7Q2M1P5 1343 aa20.39■□□□□ 0.85
CLCN1-203ENST00000455478 NME9Q86XW9 330 aa20.39■□□□□ 0.85
CLCN1-203ENST00000455478 FNBP4Q8N3X1 1017 aaPredicted RBP20.39■□□□□ 0.85
CLCN1-203ENST00000455478 FAM83GA6ND36 823 aa20.38■□□□□ 0.85
CLCN1-203ENST00000455478 GCP02774 474 aa20.38■□□□□ 0.85
CLCN1-203ENST00000455478 USP31Q70CQ4 1352 aa20.37■□□□□ 0.85
CLCN1-203ENST00000455478 POTEAQ6S8J7 498 aa20.37■□□□□ 0.85
CLCN1-203ENST00000455478 ZC3H6P61129 1189 aaKnown RBP20.36■□□□□ 0.85
CLCN1-203ENST00000455478 ZNF772Q68DY9 489 aaPredicted RBP20.36■□□□□ 0.85
CLCN1-203ENST00000455478 SLIT3O75094 1523 aa20.36■□□□□ 0.85
CLCN1-203ENST00000455478 SLIT2O94813 1529 aa20.34■□□□□ 0.85
CLCN1-203ENST00000455478 USP21Q9UK80 565 aa20.34■□□□□ 0.85
CLCN1-203ENST00000455478 BCL9LQ86UU0 1499 aa20.34■□□□□ 0.85
CLCN1-203ENST00000455478 KIAA0232Q92628 1395 aa20.34■□□□□ 0.85
CLCN1-203ENST00000455478 USP54Q70EL1 1684 aa20.33■□□□□ 0.85
CLCN1-203ENST00000455478 FYB1O15117 783 aa20.33■□□□□ 0.85
CLCN1-203ENST00000455478 PANK3Q9H999 370 aa20.33■□□□□ 0.85
CLCN1-203ENST00000455478 CCDC7Q96M83 1385 aa20.33■□□□□ 0.84
CLCN1-203ENST00000455478 WASHC2AQ641Q2 1341 aa20.32■□□□□ 0.84
CLCN1-203ENST00000455478 PRDM11Q9NQV5 511 aa20.32■□□□□ 0.84
CLCN1-203ENST00000455478 CPDO75976 1380 aa20.32■□□□□ 0.84
CLCN1-203ENST00000455478 NSD3Q9BZ95 1437 aa20.31■□□□□ 0.84
CLCN1-203ENST00000455478 CHRNA2Q15822 529 aa20.31■□□□□ 0.84
CLCN1-203ENST00000455478 QTRT2Q9H974 415 aaKnown RBP20.31■□□□□ 0.84
CLCN1-203ENST00000455478 COL14A1Q05707 1796 aaKnown RBP20.31■□□□□ 0.84
CLCN1-203ENST00000455478 OVOS2A0A0J9YW53 1432 aa20.3■□□□□ 0.84
CLCN1-203ENST00000455478 OVOS2Q6IE36 1432 aa20.3■□□□□ 0.84
CLCN1-203ENST00000455478 PLCH1Q4KWH8 1693 aa20.3■□□□□ 0.84
CLCN1-203ENST00000455478 UNC5CLQ8IV45 518 aa20.3■□□□□ 0.84
CLCN1-203ENST00000455478 KCNH5Q8NCM2 988 aa20.3■□□□□ 0.84
CLCN1-203ENST00000455478 NWD2Q9ULI1 1742 aa20.28■□□□□ 0.84
CLCN1-203ENST00000455478 SOX12O15370 315 aa20.28■□□□□ 0.84
CLCN1-203ENST00000455478 GGNBP2Q9H3C7 697 aa20.28■□□□□ 0.84
CLCN1-203ENST00000455478 BTG4Q9NY30 223 aa20.28■□□□□ 0.84
CLCN1-203ENST00000455478 NFAT5O94916 1531 aa20.27■□□□□ 0.84
CLCN1-203ENST00000455478 ARHGEF25Q86VW2 580 aa20.27■□□□□ 0.84
CLCN1-203ENST00000455478 COG3Q96JB2 828 aa20.27■□□□□ 0.84
CLCN1-203ENST00000455478 TRPC5Q9UL62 973 aaPredicted RBP20.27■□□□□ 0.84
CLCN1-203ENST00000455478 ATRNO75882 1429 aa20.27■□□□□ 0.83
CLCN1-203ENST00000455478 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.26■□□□□ 0.83
CLCN1-203ENST00000455478 KIF20BQ96Q89 1820 aa20.25■□□□□ 0.83
CLCN1-203ENST00000455478 CGNL1Q0VF96 1302 aa20.25■□□□□ 0.83
CLCN1-203ENST00000455478 NRAPQ86VF7 1730 aa20.24■□□□□ 0.83
CLCN1-203ENST00000455478 AATKQ6ZMQ8 1374 aa20.24■□□□□ 0.83
CLCN1-203ENST00000455478 COL18A1P39060 1754 aa20.24■□□□□ 0.83
CLCN1-203ENST00000455478 LMO7Q8WWI1 1683 aa20.24■□□□□ 0.83
CLCN1-203ENST00000455478 CAMTA1Q9Y6Y1 1673 aa20.24■□□□□ 0.83
CLCN1-203ENST00000455478 ZBTB7CA1YPR0 619 aa20.24■□□□□ 0.83
CLCN1-203ENST00000455478 RXRBP28702 533 aa20.24■□□□□ 0.83
CLCN1-203ENST00000455478 RBM6P78332 1123 aaKnown RBP20.23■□□□□ 0.83
CLCN1-203ENST00000455478 VPS72Q15906 364 aa20.23■□□□□ 0.83
CLCN1-203ENST00000455478 FBLN1P23142 703 aa20.22■□□□□ 0.83
CLCN1-203ENST00000455478 AXIN2Q9Y2T1 843 aa20.22■□□□□ 0.83
CLCN1-203ENST00000455478 PER1O15534 1290 aaPredicted RBP20.21■□□□□ 0.83
CLCN1-203ENST00000455478 GJD4Q96KN9 370 aaPredicted RBP20.21■□□□□ 0.83
CLCN1-203ENST00000455478 KNSTRNQ9Y448 316 aa20.19■□□□□ 0.82
CLCN1-203ENST00000455478 LTN1O94822 1766 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms