RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 U3KPZ7 1027 aaPredicted RBP11.77□□□□□ -0.53
NIF3L1-209ENST00000454952 RAB3GAP2Q9H2M9 1393 aa11.77□□□□□ -0.53
NIF3L1-209ENST00000454952 EP400Q96L91 3159 aa11.77□□□□□ -0.53
NIF3L1-209ENST00000454952 TULP4Q9NRJ4 1543 aa11.76□□□□□ -0.53
NIF3L1-209ENST00000454952 KRT27Q7Z3Y8 459 aa11.76□□□□□ -0.53
NIF3L1-209ENST00000454952 PMFBP1Q8TBY8 1022 aa11.76□□□□□ -0.53
NIF3L1-209ENST00000454952 CABLES1Q8TDN4 633 aa11.76□□□□□ -0.53
NIF3L1-209ENST00000454952 ITSN1Q15811 1721 aa11.76□□□□□ -0.53
NIF3L1-209ENST00000454952 TRPM3Q9HCF6 1732 aaPredicted RBP11.76□□□□□ -0.53
NIF3L1-209ENST00000454952 COL14A1Q05707 1796 aaKnown RBP11.76□□□□□ -0.53
NIF3L1-209ENST00000454952 ALS2Q96Q42 1657 aa11.75□□□□□ -0.53
NIF3L1-209ENST00000454952 TRAK1Q9UPV9 953 aa11.75□□□□□ -0.53
NIF3L1-209ENST00000454952 NRAPQ86VF7 1730 aa11.74□□□□□ -0.53
NIF3L1-209ENST00000454952 A0A0G2JS52 829 aa11.74□□□□□ -0.53
NIF3L1-209ENST00000454952 FAM83GA6ND36 823 aa11.74□□□□□ -0.53
NIF3L1-209ENST00000454952 MYT1Q01538 1121 aa11.74□□□□□ -0.53
NIF3L1-209ENST00000454952 WASLO00401 505 aaPredicted RBP11.73□□□□□ -0.53
NIF3L1-209ENST00000454952 PLEKHG5O94827 1062 aa11.73□□□□□ -0.53
NIF3L1-209ENST00000454952 HRCP23327 699 aa11.73□□□□□ -0.53
NIF3L1-209ENST00000454952 MINK1Q8N4C8 1332 aaPredicted RBP11.73□□□□□ -0.53
NIF3L1-209ENST00000454952 NGDNQ8NEJ9 315 aaKnown RBP11.73□□□□□ -0.53
NIF3L1-209ENST00000454952 DCAF11Q8TEB1 546 aa11.73□□□□□ -0.53
NIF3L1-209ENST00000454952 BAG6P46379 1132 aa11.72□□□□□ -0.53
NIF3L1-209ENST00000454952 HIRIP3Q9BW71 556 aaPredicted RBP11.72□□□□□ -0.53
NIF3L1-209ENST00000454952 BTG4Q9NY30 223 aa11.72□□□□□ -0.53
NIF3L1-209ENST00000454952 KDM2AQ9Y2K7 1162 aa11.72□□□□□ -0.53
NIF3L1-209ENST00000454952 DEFB132Q7Z7B7 95 aa11.71□□□□□ -0.53
NIF3L1-209ENST00000454952 RGPD1P0DJD0 1748 aa11.71□□□□□ -0.54
NIF3L1-209ENST00000454952 ARHGEF28Q8N1W1 1705 aaKnown RBP11.71□□□□□ -0.54
NIF3L1-209ENST00000454952 ATP7BP35670 1465 aa11.7□□□□□ -0.54
NIF3L1-209ENST00000454952 PRR36Q9H6K5 1346 aa11.7□□□□□ -0.54
NIF3L1-209ENST00000454952 PAK3O75914 559 aaPredicted RBP11.7□□□□□ -0.54
NIF3L1-209ENST00000454952 FAM98CQ17RN3 349 aaKnown RBP11.7□□□□□ -0.54
NIF3L1-209ENST00000454952 PRDM11Q9NQV5 511 aa11.7□□□□□ -0.54
NIF3L1-209ENST00000454952 LRP5O75197 1615 aa11.7□□□□□ -0.54
NIF3L1-209ENST00000454952 CRYBG1Q9Y4K1 1723 aa11.69□□□□□ -0.54
NIF3L1-209ENST00000454952 SPATA31A5Q5VU36 1347 aa11.69□□□□□ -0.54
NIF3L1-209ENST00000454952 SPATA31A7Q8IWB4 1347 aa11.69□□□□□ -0.54
NIF3L1-209ENST00000454952 ATF5Q9Y2D1 282 aaPredicted RBP11.69□□□□□ -0.54
NIF3L1-209ENST00000454952 KIAA1210Q9ULL0 1709 aa11.69□□□□□ -0.54
NIF3L1-209ENST00000454952 NUDT16Q96DE0 195 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-209ENST00000454952 THSD7AQ9UPZ6 1657 aa11.67□□□□□ -0.54
NIF3L1-209ENST00000454952 SAMD1Q6SPF0 538 aaPredicted RBP11.66□□□□□ -0.54
NIF3L1-209ENST00000454952 CCDC61Q9Y6R9 512 aa11.66□□□□□ -0.54
NIF3L1-209ENST00000454952 DISP2A7MBM2 1401 aa11.66□□□□□ -0.54
NIF3L1-209ENST00000454952 SRCAPQ6ZRS2 3230 aa11.65□□□□□ -0.54
NIF3L1-209ENST00000454952 PHRF1Q9P1Y6 1649 aaKnown RBP11.65□□□□□ -0.54
NIF3L1-209ENST00000454952 POLR3AO14802 1390 aaPredicted RBP11.65□□□□□ -0.55
NIF3L1-209ENST00000454952 KIAA0232Q92628 1395 aa11.65□□□□□ -0.55
NIF3L1-209ENST00000454952 TOPAZ1Q8N9V7 1692 aa11.65□□□□□ -0.55
NIF3L1-209ENST00000454952 SPATA31A1Q5TZJ5 1347 aa11.64□□□□□ -0.55
NIF3L1-209ENST00000454952 FAM196AQ6ZSG2 479 aa11.64□□□□□ -0.55
NIF3L1-209ENST00000454952 CDK19Q9BWU1 502 aa11.64□□□□□ -0.55
NIF3L1-209ENST00000454952 PARD3Q8TEW0 1356 aa11.64□□□□□ -0.55
NIF3L1-209ENST00000454952 PLEKHG3A1L390 1219 aa11.63□□□□□ -0.55
NIF3L1-209ENST00000454952 EVA1CP58658 441 aa11.63□□□□□ -0.55
NIF3L1-209ENST00000454952 BRD4O60885 1362 aaPredicted RBP11.63□□□□□ -0.55
NIF3L1-209ENST00000454952 TNS1Q9HBL0 1735 aaKnown RBP11.63□□□□□ -0.55
NIF3L1-209ENST00000454952 ACEP12821 1306 aa11.62□□□□□ -0.55
NIF3L1-209ENST00000454952 C11orf95C9JLR9 678 aaPredicted RBP11.62□□□□□ -0.55
NIF3L1-209ENST00000454952 NBPF8Q3BBV2 869 aa11.62□□□□□ -0.55
NIF3L1-209ENST00000454952 BARGINQ6ZT62 677 aa11.62□□□□□ -0.55
NIF3L1-209ENST00000454952 STRN4Q9NRL3 753 aa11.62□□□□□ -0.55
NIF3L1-209ENST00000454952 EN1Q05925 392 aaPredicted RBP11.61□□□□□ -0.55
NIF3L1-209ENST00000454952 ABTB2Q8N961 1025 aa11.61□□□□□ -0.55
NIF3L1-209ENST00000454952 CPDO75976 1380 aa11.61□□□□□ -0.55
NIF3L1-209ENST00000454952 SSH2Q76I76 1423 aa11.6□□□□□ -0.55
NIF3L1-209ENST00000454952 NRKQ7Z2Y5 1582 aa11.6□□□□□ -0.55
NIF3L1-209ENST00000454952 PSDA5PKW4 1024 aaPredicted RBP11.6□□□□□ -0.55
NIF3L1-209ENST00000454952 ZC3H6P61129 1189 aaKnown RBP11.6□□□□□ -0.55
NIF3L1-209ENST00000454952 PDE3BQ13370 1112 aa11.6□□□□□ -0.55
NIF3L1-209ENST00000454952 CHRNA2Q15822 529 aa11.6□□□□□ -0.55
NIF3L1-209ENST00000454952 NLRP13Q86W25 1043 aa11.6□□□□□ -0.55
NIF3L1-209ENST00000454952 THRAP3Q9Y2W1 955 aaKnown RBP11.6□□□□□ -0.55
NIF3L1-209ENST00000454952 SRPK2P78362 688 aaKnown RBP11.59□□□□□ -0.55
NIF3L1-209ENST00000454952 TCP11L2Q8N4U5 519 aa11.59□□□□□ -0.55
NIF3L1-209ENST00000454952 USP19O94966 1318 aa11.59□□□□□ -0.55
NIF3L1-209ENST00000454952 CENPJQ9HC77 1338 aaPredicted RBP11.59□□□□□ -0.55
NIF3L1-209ENST00000454952 TRIM37O94972 964 aa11.58□□□□□ -0.56
NIF3L1-209ENST00000454952 FAM182BQ5T319 152 aa11.58□□□□□ -0.56
NIF3L1-209ENST00000454952 NUTM2GQ5VZR2 741 aa11.58□□□□□ -0.56
NIF3L1-209ENST00000454952 PPIP5K1Q6PFW1 1433 aa11.58□□□□□ -0.56
NIF3L1-209ENST00000454952 LMO7Q8WWI1 1683 aa11.58□□□□□ -0.56
NIF3L1-209ENST00000454952 APBA3O96018 575 aa11.57□□□□□ -0.56
NIF3L1-209ENST00000454952 R3HDM1Q15032 1099 aaKnown RBP11.57□□□□□ -0.56
NIF3L1-209ENST00000454952 NBPF14Q5TI25 921 aa11.57□□□□□ -0.56
NIF3L1-209ENST00000454952 USP35Q9P2H5 1018 aa11.57□□□□□ -0.56
NIF3L1-209ENST00000454952 QRICH2Q9H0J4 1663 aa11.56□□□□□ -0.56
NIF3L1-209ENST00000454952 CAMTA1Q9Y6Y1 1673 aa11.56□□□□□ -0.56
NIF3L1-209ENST00000454952 GCP02774 474 aa11.56□□□□□ -0.56
NIF3L1-209ENST00000454952 EZH2Q15910 746 aaKnown RBP11.56□□□□□ -0.56
NIF3L1-209ENST00000454952 CAMKK2Q96RR4 588 aa11.56□□□□□ -0.56
NIF3L1-209ENST00000454952 PARP4Q9UKK3 1724 aaKnown RBP11.56□□□□□ -0.56
NIF3L1-209ENST00000454952 LARP1Q6PKG0 1096 aaKnown RBP11.55□□□□□ -0.56
NIF3L1-209ENST00000454952 RREB1Q92766 1687 aa11.55□□□□□ -0.56
NIF3L1-209ENST00000454952 NBPF1Q3BBV0 1214 aa11.54□□□□□ -0.56
NIF3L1-209ENST00000454952 COL5A2P05997 1499 aaPredicted RBP11.54□□□□□ -0.56
NIF3L1-209ENST00000454952 AATKQ6ZMQ8 1374 aa11.54□□□□□ -0.56
NIF3L1-209ENST00000454952 USP6P35125 1406 aa11.53□□□□□ -0.56
NIF3L1-209ENST00000454952 CRB1P82279 1406 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms