RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 SCAF11Q99590 1463 aaKnown RBP14.06□□□□□ -0.16
DDR1-240ENST00000454612 ABCC3O15438 1527 aa14.06□□□□□ -0.16
DDR1-240ENST00000454612 LAMC1P11047 1609 aa14.05□□□□□ -0.16
DDR1-240ENST00000454612 PNNQ9H307 717 aaKnown RBP14.05□□□□□ -0.16
DDR1-240ENST00000454612 MIS18AQ9NYP9 233 aa14.05□□□□□ -0.16
DDR1-240ENST00000454612 A0A0G2JS52 829 aa14.05□□□□□ -0.16
DDR1-240ENST00000454612 CDK19Q9BWU1 502 aa14.05□□□□□ -0.16
DDR1-240ENST00000454612 PTPRTO14522 1441 aa14.05□□□□□ -0.16
DDR1-240ENST00000454612 MADDQ8WXG6 1647 aa14.05□□□□□ -0.16
DDR1-240ENST00000454612 PCDHB15Q9Y5E8 787 aa14.05□□□□□ -0.16
DDR1-240ENST00000454612 NCKAP5LQ9HCH0 1330 aa14.04□□□□□ -0.16
DDR1-240ENST00000454612 EFCAB6Q5THR3 1501 aa14.04□□□□□ -0.16
DDR1-240ENST00000454612 IPO8O15397 1037 aaKnown RBP14.04□□□□□ -0.16
DDR1-240ENST00000454612 SLC52A1Q9NWF4 448 aa14.04□□□□□ -0.16
DDR1-240ENST00000454612 CLTCL1P53675 1640 aa14.04□□□□□ -0.16
DDR1-240ENST00000454612 RARSP54136 660 aaKnown RBP14.04□□□□□ -0.16
DDR1-240ENST00000454612 ZRANB1Q9UGI0 708 aa14.04□□□□□ -0.16
DDR1-240ENST00000454612 DEPDC5O75140 1603 aa14.03□□□□□ -0.16
DDR1-240ENST00000454612 NOS1P29475 1434 aa14.03□□□□□ -0.16
DDR1-240ENST00000454612 TRPM2O94759 1503 aa14.03□□□□□ -0.16
DDR1-240ENST00000454612 SSH1Q8WYL5 1049 aa14.03□□□□□ -0.16
DDR1-240ENST00000454612 TRIM44Q96DX7 344 aaPredicted RBP14.03□□□□□ -0.16
DDR1-240ENST00000454612 RNF17Q9BXT8 1623 aaKnown RBP14.02□□□□□ -0.16
DDR1-240ENST00000454612 ZMYM3Q14202 1370 aa14.02□□□□□ -0.16
DDR1-240ENST00000454612 MROH1Q8NDA8 1641 aa14.02□□□□□ -0.16
DDR1-240ENST00000454612 SLC26A8Q96RN1 970 aa14.02□□□□□ -0.17
DDR1-240ENST00000454612 NGDNQ8NEJ9 315 aaKnown RBP14.02□□□□□ -0.17
DDR1-240ENST00000454612 EMILIN1Q9Y6C2 1016 aa14.02□□□□□ -0.17
DDR1-240ENST00000454612 FAM83GA6ND36 823 aa14□□□□□ -0.17
DDR1-240ENST00000454612 TMEM57Q8N5G2 664 aa14□□□□□ -0.17
DDR1-240ENST00000454612 ZNF521Q96K83 1311 aa14□□□□□ -0.17
DDR1-240ENST00000454612 SPHKAPQ2M3C7 1700 aa14□□□□□ -0.17
DDR1-240ENST00000454612 TMPOP42166 694 aaKnown RBP13.99□□□□□ -0.17
DDR1-240ENST00000454612 RTF1Q92541 710 aaKnown RBP13.99□□□□□ -0.17
DDR1-240ENST00000454612 COG3Q96JB2 828 aa13.99□□□□□ -0.17
DDR1-240ENST00000454612 USP35Q9P2H5 1018 aa13.99□□□□□ -0.17
DDR1-240ENST00000454612 ANP32BQ92688 251 aaKnown RBP13.99□□□□□ -0.17
DDR1-240ENST00000454612 ASXL1Q8IXJ9 1541 aa13.99□□□□□ -0.17
DDR1-240ENST00000454612 CAMSAP1Q5T5Y3 1602 aa13.99□□□□□ -0.17
DDR1-240ENST00000454612 NME9Q86XW9 330 aa13.98□□□□□ -0.17
DDR1-240ENST00000454612 C22orf23Q9BZE7 217 aa13.98□□□□□ -0.17
DDR1-240ENST00000454612 AGLP35573 1532 aa13.98□□□□□ -0.17
DDR1-240ENST00000454612 STAC3Q96MF2 364 aa13.98□□□□□ -0.17
DDR1-240ENST00000454612 VWDEQ8N2E2 1590 aa13.98□□□□□ -0.17
DDR1-240ENST00000454612 AMPHP49418 695 aa13.98□□□□□ -0.17
DDR1-240ENST00000454612 INSRP06213 1382 aa13.98□□□□□ -0.17
DDR1-240ENST00000454612 CLTCQ00610 1675 aaKnown RBP13.98□□□□□ -0.17
DDR1-240ENST00000454612 IQGAP1P46940 1657 aa13.97□□□□□ -0.17
DDR1-240ENST00000454612 LMTK2Q8IWU2 1503 aa13.97□□□□□ -0.17
DDR1-240ENST00000454612 PLCB2Q00722 1185 aa13.97□□□□□ -0.17
DDR1-240ENST00000454612 C8orf34Q49A92 452 aa13.96□□□□□ -0.17
DDR1-240ENST00000454612 TNRQ92752 1358 aa13.96□□□□□ -0.17
DDR1-240ENST00000454612 EIF2S2P20042 333 aaKnown RBP13.96□□□□□ -0.17
DDR1-240ENST00000454612 PDE3AQ14432 1141 aa13.96□□□□□ -0.17
DDR1-240ENST00000454612 DDX19BQ9UMR2 479 aa13.96□□□□□ -0.17
DDR1-240ENST00000454612 CCDC9Q9Y3X0 531 aaKnown RBP13.96□□□□□ -0.17
DDR1-240ENST00000454612 ERVK-7P63135 1459 aa13.96□□□□□ -0.18
DDR1-240ENST00000454612 TRIM6-TRIM34B2RNG4 842 aa13.96□□□□□ -0.18
DDR1-240ENST00000454612 SULT6B1Q6IMI4 303 aa13.96□□□□□ -0.18
DDR1-240ENST00000454612 TRIM27P14373 513 aa13.95□□□□□ -0.18
DDR1-240ENST00000454612 HDGFP51858 240 aaKnown RBP13.95□□□□□ -0.18
DDR1-240ENST00000454612 OS9Q13438 667 aaPredicted RBP13.95□□□□□ -0.18
DDR1-240ENST00000454612 ZMYND15Q9H091 742 aa13.95□□□□□ -0.18
DDR1-240ENST00000454612 MVPQ14764 893 aaKnown RBP13.94□□□□□ -0.18
DDR1-240ENST00000454612 KRT24Q2M2I5 525 aa13.94□□□□□ -0.18
DDR1-240ENST00000454612 PIK3C2GO75747 1445 aa13.94□□□□□ -0.18
DDR1-240ENST00000454612 MCM10Q7L590 875 aa13.94□□□□□ -0.18
DDR1-240ENST00000454612 SYNMO15061 1565 aa13.94□□□□□ -0.18
DDR1-240ENST00000454612 ATF7IPQ6VMQ6 1270 aa13.94□□□□□ -0.18
DDR1-240ENST00000454612 KDM2BQ8NHM5 1336 aa13.93□□□□□ -0.18
DDR1-240ENST00000454612 ARHGAP31Q2M1Z3 1444 aa13.93□□□□□ -0.18
DDR1-240ENST00000454612 REREQ9P2R6 1566 aa13.93□□□□□ -0.18
DDR1-240ENST00000454612 RILPL2Q969X0 211 aa13.93□□□□□ -0.18
DDR1-240ENST00000454612 ZC3H13Q5T200 1668 aaKnown RBP13.93□□□□□ -0.18
DDR1-240ENST00000454612 EID1Q9Y6B2 187 aa13.93□□□□□ -0.18
DDR1-240ENST00000454612 KIF1BO60333 1816 aa13.92□□□□□ -0.18
DDR1-240ENST00000454612 C14orf93Q9H972 538 aaKnown RBP13.92□□□□□ -0.18
DDR1-240ENST00000454612 NGEFQ8N5V2 710 aa13.92□□□□□ -0.18
DDR1-240ENST00000454612 RPGRIP1LQ68CZ1 1315 aa13.92□□□□□ -0.18
DDR1-240ENST00000454612 FYB1O15117 783 aa13.92□□□□□ -0.18
DDR1-240ENST00000454612 TWISTNBQ3B726 338 aaPredicted RBP13.91□□□□□ -0.18
DDR1-240ENST00000454612 TRMT2AQ8IZ69 625 aaKnown RBP13.91□□□□□ -0.18
DDR1-240ENST00000454612 SMARCA5O60264 1052 aaPredicted RBP13.91□□□□□ -0.18
DDR1-240ENST00000454612 NPC1L1Q9UHC9 1359 aa13.9□□□□□ -0.18
DDR1-240ENST00000454612 TSPYL6Q8N831 410 aa13.9□□□□□ -0.18
DDR1-240ENST00000454612 PHACTR3Q96KR7 559 aa13.9□□□□□ -0.18
DDR1-240ENST00000454612 NKTRP30414 1462 aaKnown RBP13.9□□□□□ -0.18
DDR1-240ENST00000454612 MYOM1P52179 1685 aa13.9□□□□□ -0.18
DDR1-240ENST00000454612 GOLGA6L22H0YM25 854 aa13.89□□□□□ -0.19
DDR1-240ENST00000454612 SIGLEC1Q9BZZ2 1709 aa13.89□□□□□ -0.19
DDR1-240ENST00000454612 GOLGA6L3A6NEY3 463 aa13.88□□□□□ -0.19
DDR1-240ENST00000454612 XPCQ01831 940 aaPredicted RBP13.88□□□□□ -0.19
DDR1-240ENST00000454612 TSHZ3Q63HK5 1081 aa13.88□□□□□ -0.19
DDR1-240ENST00000454612 WDR63Q8IWG1 891 aa13.88□□□□□ -0.19
DDR1-240ENST00000454612 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.88□□□□□ -0.19
DDR1-240ENST00000454612 ZNF330Q9Y3S2 320 aaPredicted RBP13.88□□□□□ -0.19
DDR1-240ENST00000454612 F6X3S4 739 aa13.88□□□□□ -0.19
DDR1-240ENST00000454612 TBC1D2Q9BYX2 928 aa13.88□□□□□ -0.19
DDR1-240ENST00000454612 FKBP5Q13451 457 aaPredicted RBP13.87□□□□□ -0.19
DDR1-240ENST00000454612 AEBP1Q8IUX7 1158 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms