RNA–Protein interactions for RNA: ENST00000454568.1

RFC3P1-201, Transcript of replication factor C 3 pseudogene 1, humanhuman

BASIC

Gene RFC3P1, Length 682 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P1-201ENST00000454568 PTPRTO14522 1441 aa13.22□□□□□ -0.29
RFC3P1-201ENST00000454568 MYO3AQ8NEV4 1616 aa13.21□□□□□ -0.29
RFC3P1-201ENST00000454568 PACS2Q86VP3 889 aa13.21□□□□□ -0.29
RFC3P1-201ENST00000454568 RRP7BPQ9NSQ0 103 aa13.21□□□□□ -0.29
RFC3P1-201ENST00000454568 TSR3Q9UJK0 312 aaKnown RBP13.21□□□□□ -0.29
RFC3P1-201ENST00000454568 NCOA1Q15788 1441 aa13.21□□□□□ -0.3
RFC3P1-201ENST00000454568 CEP170BQ9Y4F5 1589 aaPredicted RBP13.2□□□□□ -0.3
RFC3P1-201ENST00000454568 FAM50AQ14320 339 aaKnown RBP13.2□□□□□ -0.3
RFC3P1-201ENST00000454568 RBM33Q96EV2 1170 aaKnown RBP13.2□□□□□ -0.3
RFC3P1-201ENST00000454568 CHIC2Q9UKJ5 165 aa13.2□□□□□ -0.3
RFC3P1-201ENST00000454568 FGD6Q6ZV73 1430 aa13.2□□□□□ -0.3
RFC3P1-201ENST00000454568 TNRQ92752 1358 aa13.2□□□□□ -0.3
RFC3P1-201ENST00000454568 FAM135AQ9P2D6 1515 aa13.19□□□□□ -0.3
RFC3P1-201ENST00000454568 DDX12PQ92771 950 aa13.19□□□□□ -0.3
RFC3P1-201ENST00000454568 PZPP20742 1482 aa13.18□□□□□ -0.3
RFC3P1-201ENST00000454568 ABCC5O15440 1437 aa13.18□□□□□ -0.3
RFC3P1-201ENST00000454568 KIF15Q9NS87 1388 aa13.18□□□□□ -0.3
RFC3P1-201ENST00000454568 DUOX2Q9NRD8 1548 aa13.18□□□□□ -0.3
RFC3P1-201ENST00000454568 ZNF142P52746 1687 aaPredicted RBP13.18□□□□□ -0.3
RFC3P1-201ENST00000454568 EIF2AK4Q9P2K8 1649 aaKnown RBP13.17□□□□□ -0.3
RFC3P1-201ENST00000454568 DAPK1P53355 1430 aa13.17□□□□□ -0.3
RFC3P1-201ENST00000454568 A2ML1A8K2U0 1454 aa13.16□□□□□ -0.3
RFC3P1-201ENST00000454568 CROCC2H7BZ55 1655 aa13.16□□□□□ -0.3
RFC3P1-201ENST00000454568 EN1Q05925 392 aaPredicted RBP13.16□□□□□ -0.3
RFC3P1-201ENST00000454568 HPS5Q9UPZ3 1129 aa13.16□□□□□ -0.3
RFC3P1-201ENST00000454568 SHANK2Q9UPX8 1470 aa13.16□□□□□ -0.3
RFC3P1-201ENST00000454568 DNMT1P26358 1616 aaKnown RBP13.15□□□□□ -0.3
RFC3P1-201ENST00000454568 RNF17Q9BXT8 1623 aaKnown RBP13.15□□□□□ -0.3
RFC3P1-201ENST00000454568 SPDYE16A6NNV3 312 aaPredicted RBP13.15□□□□□ -0.3
RFC3P1-201ENST00000454568 MAP3K7O43318 606 aa13.15□□□□□ -0.3
RFC3P1-201ENST00000454568 NBR1Q14596 966 aa13.15□□□□□ -0.3
RFC3P1-201ENST00000454568 THEMISQ8N1K5 641 aaPredicted RBP13.15□□□□□ -0.3
RFC3P1-201ENST00000454568 ANKRD30AQ9BXX3 1397 aa13.15□□□□□ -0.3
RFC3P1-201ENST00000454568 PLA2R1Q13018 1463 aa13.15□□□□□ -0.3
RFC3P1-201ENST00000454568 TCOF1Q13428 1488 aaKnown RBP13.15□□□□□ -0.3
RFC3P1-201ENST00000454568 PDIA6Q15084 440 aa13.14□□□□□ -0.31
RFC3P1-201ENST00000454568 BBXQ8WY36 941 aaPredicted RBP13.14□□□□□ -0.31
RFC3P1-201ENST00000454568 ZC3H13Q5T200 1668 aaKnown RBP13.14□□□□□ -0.31
RFC3P1-201ENST00000454568 ABCC3O15438 1527 aa13.13□□□□□ -0.31
RFC3P1-201ENST00000454568 CFAP65Q6ZU64 1925 aaKnown RBP13.13□□□□□ -0.31
RFC3P1-201ENST00000454568 KANK1Q14678 1352 aa13.13□□□□□ -0.31
RFC3P1-201ENST00000454568 CEP152O94986 1710 aa13.13□□□□□ -0.31
RFC3P1-201ENST00000454568 ERBINQ96RT1 1412 aa13.13□□□□□ -0.31
RFC3P1-201ENST00000454568 ANKLE2Q86XL3 938 aa13.12□□□□□ -0.31
RFC3P1-201ENST00000454568 NLRP1Q9C000 1473 aa13.11□□□□□ -0.31
RFC3P1-201ENST00000454568 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.11□□□□□ -0.31
RFC3P1-201ENST00000454568 PPARGC1BQ86YN6 1023 aaKnown RBP13.11□□□□□ -0.31
RFC3P1-201ENST00000454568 UGGT1Q9NYU2 1555 aa13.11□□□□□ -0.31
RFC3P1-201ENST00000454568 ZNF335Q9H4Z2 1342 aaPredicted RBP13.11□□□□□ -0.31
RFC3P1-201ENST00000454568 PPP4CP60510 307 aa13.1□□□□□ -0.31
RFC3P1-201ENST00000454568 LAPTM4AQ15012 233 aa13.1□□□□□ -0.31
RFC3P1-201ENST00000454568 MROH1Q8NDA8 1641 aa13.1□□□□□ -0.31
RFC3P1-201ENST00000454568 Q6ZNB5 142 aa13.09□□□□□ -0.31
RFC3P1-201ENST00000454568 LTBP4Q8N2S1 1624 aa13.09□□□□□ -0.31
RFC3P1-201ENST00000454568 TSKSQ9UJT2 592 aa13.08□□□□□ -0.32
RFC3P1-201ENST00000454568 ERVK-7P63135 1459 aa13.08□□□□□ -0.32
RFC3P1-201ENST00000454568 POLR1AO95602 1720 aaPredicted RBP13.08□□□□□ -0.32
RFC3P1-201ENST00000454568 SPATA31D1Q6ZQQ2 1576 aa13.07□□□□□ -0.32
RFC3P1-201ENST00000454568 ITGAEP38570 1179 aa13.07□□□□□ -0.32
RFC3P1-201ENST00000454568 TSR1Q2NL82 804 aaKnown RBP13.07□□□□□ -0.32
RFC3P1-201ENST00000454568 PRDM15P57071 1507 aaPredicted RBP13.07□□□□□ -0.32
RFC3P1-201ENST00000454568 PRSS12P56730 875 aa13.05□□□□□ -0.32
RFC3P1-201ENST00000454568 CDCA7LQ96GN5 454 aa13.05□□□□□ -0.32
RFC3P1-201ENST00000454568 DEPDC5O75140 1603 aa13.05□□□□□ -0.32
RFC3P1-201ENST00000454568 ARHGAP31Q2M1Z3 1444 aa13.05□□□□□ -0.32
RFC3P1-201ENST00000454568 UBAP1LF5GYI3 381 aa13.04□□□□□ -0.32
RFC3P1-201ENST00000454568 NPHP4O75161 1426 aaPredicted RBP13.04□□□□□ -0.32
RFC3P1-201ENST00000454568 ANKRD50Q9ULJ7 1429 aa13.04□□□□□ -0.32
RFC3P1-201ENST00000454568 ADGRL2O95490 1459 aa13.04□□□□□ -0.32
RFC3P1-201ENST00000454568 IQSEC2Q5JU85 1478 aa13.04□□□□□ -0.32
RFC3P1-201ENST00000454568 NBPF26B4DH59 902 aa13.03□□□□□ -0.32
RFC3P1-201ENST00000454568 HDGFP51858 240 aaKnown RBP13.02□□□□□ -0.33
RFC3P1-201ENST00000454568 TXNDC2Q86VQ3 553 aa13.02□□□□□ -0.33
RFC3P1-201ENST00000454568 SPRYD3Q8NCJ5 442 aa13.02□□□□□ -0.33
RFC3P1-201ENST00000454568 EID1Q9Y6B2 187 aa13.02□□□□□ -0.33
RFC3P1-201ENST00000454568 NEURL4Q96JN8 1562 aa13.02□□□□□ -0.33
RFC3P1-201ENST00000454568 E2F4Q16254 413 aa13.01□□□□□ -0.33
RFC3P1-201ENST00000454568 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.01□□□□□ -0.33
RFC3P1-201ENST00000454568 UBR1Q8IWV7 1749 aa13.01□□□□□ -0.33
RFC3P1-201ENST00000454568 SAMD7Q7Z3H4 446 aa13□□□□□ -0.33
RFC3P1-201ENST00000454568 NECTIN2Q92692 538 aa13□□□□□ -0.33
RFC3P1-201ENST00000454568 WDR70Q9NW82 654 aa13□□□□□ -0.33
RFC3P1-201ENST00000454568 ARIH1Q9Y4X5 557 aaPredicted RBP13□□□□□ -0.33
RFC3P1-201ENST00000454568 MED14O60244 1454 aa12.99□□□□□ -0.33
RFC3P1-201ENST00000454568 IDI1Q13907 227 aa12.99□□□□□ -0.33
RFC3P1-201ENST00000454568 IQGAP1P46940 1657 aa12.99□□□□□ -0.33
RFC3P1-201ENST00000454568 LMTK2Q8IWU2 1503 aa12.98□□□□□ -0.33
RFC3P1-201ENST00000454568 PIK3C2BO00750 1634 aa12.98□□□□□ -0.33
RFC3P1-201ENST00000454568 CPS1P31327 1500 aa12.98□□□□□ -0.33
RFC3P1-201ENST00000454568 LTKP29376 864 aa12.97□□□□□ -0.33
RFC3P1-201ENST00000454568 TATDN2Q93075 761 aa12.97□□□□□ -0.33
RFC3P1-201ENST00000454568 BCANQ96GW7 911 aa12.97□□□□□ -0.33
RFC3P1-201ENST00000454568 IL21Q9HBE4 155 aa12.97□□□□□ -0.33
RFC3P1-201ENST00000454568 SLC52A1Q9NWF4 448 aa12.97□□□□□ -0.33
RFC3P1-201ENST00000454568 RBM27Q9P2N5 1060 aaKnown RBP12.97□□□□□ -0.33
RFC3P1-201ENST00000454568 VWDEQ8N2E2 1590 aa12.97□□□□□ -0.33
RFC3P1-201ENST00000454568 SCAF11Q99590 1463 aaKnown RBP12.97□□□□□ -0.33
RFC3P1-201ENST00000454568 ROCK1Q13464 1354 aa12.96□□□□□ -0.33
RFC3P1-201ENST00000454568 GRXCR2A6NFK2 248 aa12.96□□□□□ -0.33
RFC3P1-201ENST00000454568 TOM1O60784 492 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms