RNA–Protein interactions for RNA: ENST00000454441.2

LINC01287-203, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 5 BASIC

Gene LINC01287, Length 1,007 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-203ENST00000454441 CRYBG1Q9Y4K1 1723 aa17.15■□□□□ 0.34
LINC01287-203ENST00000454441 GLI3P10071 1580 aa17.15■□□□□ 0.34
LINC01287-203ENST00000454441 ATAD2Q6PL18 1390 aa17.15■□□□□ 0.34
LINC01287-203ENST00000454441 PAK3O75914 559 aaPredicted RBP17.14■□□□□ 0.33
LINC01287-203ENST00000454441 NEUROD1Q13562 356 aa17.14■□□□□ 0.33
LINC01287-203ENST00000454441 RALGAPBQ86X10 1494 aa17.13■□□□□ 0.33
LINC01287-203ENST00000454441 CENPJQ9HC77 1338 aaPredicted RBP17.13■□□□□ 0.33
LINC01287-203ENST00000454441 NRAPQ86VF7 1730 aa17.12■□□□□ 0.33
LINC01287-203ENST00000454441 COL14A1Q05707 1796 aaKnown RBP17.12■□□□□ 0.33
LINC01287-203ENST00000454441 BRWD3Q6RI45 1802 aa17.11■□□□□ 0.33
LINC01287-203ENST00000454441 CCDC61Q9Y6R9 512 aa17.1■□□□□ 0.33
LINC01287-203ENST00000454441 PHRF1Q9P1Y6 1649 aaKnown RBP17.1■□□□□ 0.33
LINC01287-203ENST00000454441 FAM83GA6ND36 823 aa17.09■□□□□ 0.33
LINC01287-203ENST00000454441 SRPK2P78362 688 aaKnown RBP17.09■□□□□ 0.33
LINC01287-203ENST00000454441 CACNB1Q02641 598 aaPredicted RBP17.09■□□□□ 0.33
LINC01287-203ENST00000454441 VPS72Q15906 364 aa17.09■□□□□ 0.33
LINC01287-203ENST00000454441 CCDC9Q9Y3X0 531 aaKnown RBP17.09■□□□□ 0.33
LINC01287-203ENST00000454441 ACEP12821 1306 aa17.09■□□□□ 0.33
LINC01287-203ENST00000454441 POLR3AO14802 1390 aaPredicted RBP17.09■□□□□ 0.33
LINC01287-203ENST00000454441 EP400Q96L91 3159 aa17.08■□□□□ 0.32
LINC01287-203ENST00000454441 PPIP5K1Q6PFW1 1433 aa17.07■□□□□ 0.32
LINC01287-203ENST00000454441 ROCK2O75116 1388 aaKnown RBP17.07■□□□□ 0.32
LINC01287-203ENST00000454441 DCAF8L1A6NGE4 600 aa17.07■□□□□ 0.32
LINC01287-203ENST00000454441 PLEKHG3A1L390 1219 aa17.06■□□□□ 0.32
LINC01287-203ENST00000454441 NBPF8Q3BBV2 869 aa17.06■□□□□ 0.32
LINC01287-203ENST00000454441 CABP2Q9NPB3 220 aa17.06■□□□□ 0.32
LINC01287-203ENST00000454441 BTG4Q9NY30 223 aa17.06■□□□□ 0.32
LINC01287-203ENST00000454441 NUTM2GQ5VZR2 741 aa17.04■□□□□ 0.32
LINC01287-203ENST00000454441 PRDM11Q9NQV5 511 aa17.04■□□□□ 0.32
LINC01287-203ENST00000454441 SEPT12Q8IYM1 358 aa17.03■□□□□ 0.32
LINC01287-203ENST00000454441 NRKQ7Z2Y5 1582 aa17.02■□□□□ 0.31
LINC01287-203ENST00000454441 KIAA0232Q92628 1395 aa17.02■□□□□ 0.31
LINC01287-203ENST00000454441 EVC2Q86UK5 1308 aa17.01■□□□□ 0.31
LINC01287-203ENST00000454441 A0A0G2JS52 829 aa17.01■□□□□ 0.31
LINC01287-203ENST00000454441 MYT1Q01538 1121 aa17.01■□□□□ 0.31
LINC01287-203ENST00000454441 ABTB2Q8N961 1025 aa17.01■□□□□ 0.31
LINC01287-203ENST00000454441 TRIM26Q12899 539 aaPredicted RBP17■□□□□ 0.31
LINC01287-203ENST00000454441 TONSLQ96HA7 1378 aa17■□□□□ 0.31
LINC01287-203ENST00000454441 ONECUT3O60422 494 aaPredicted RBP16.99■□□□□ 0.31
LINC01287-203ENST00000454441 ZC3H6P61129 1189 aaKnown RBP16.99■□□□□ 0.31
LINC01287-203ENST00000454441 FAM98CQ17RN3 349 aaKnown RBP16.99■□□□□ 0.31
LINC01287-203ENST00000454441 CCDC125Q86Z20 511 aa16.99■□□□□ 0.31
LINC01287-203ENST00000454441 CABP1Q9NZU7 370 aa16.99■□□□□ 0.31
LINC01287-203ENST00000454441 CHRNA2Q15822 529 aa16.98■□□□□ 0.31
LINC01287-203ENST00000454441 BRD4O60885 1362 aaPredicted RBP16.98■□□□□ 0.31
LINC01287-203ENST00000454441 AKAP12Q02952 1782 aa16.97■□□□□ 0.31
LINC01287-203ENST00000454441 USP6P35125 1406 aa16.97■□□□□ 0.31
LINC01287-203ENST00000454441 KRT27Q7Z3Y8 459 aa16.97■□□□□ 0.31
LINC01287-203ENST00000454441 SPATA31A5Q5VU36 1347 aa16.96■□□□□ 0.31
LINC01287-203ENST00000454441 SPATA31A7Q8IWB4 1347 aa16.96■□□□□ 0.31
LINC01287-203ENST00000454441 BLMP54132 1417 aaPredicted RBP16.96■□□□□ 0.31
LINC01287-203ENST00000454441 NLRP13Q86W25 1043 aa16.96■□□□□ 0.31
LINC01287-203ENST00000454441 USP19O94966 1318 aa16.96■□□□□ 0.3
LINC01287-203ENST00000454441 THSD7AQ9UPZ6 1657 aa16.95■□□□□ 0.3
LINC01287-203ENST00000454441 CARD11Q9BXL7 1154 aa16.95■□□□□ 0.3
LINC01287-203ENST00000454441 STRN4Q9NRL3 753 aa16.95■□□□□ 0.3
LINC01287-203ENST00000454441 PIK3C2AO00443 1686 aa16.94■□□□□ 0.3
LINC01287-203ENST00000454441 LMO7Q8WWI1 1683 aa16.94■□□□□ 0.3
LINC01287-203ENST00000454441 CPDO75976 1380 aa16.93■□□□□ 0.3
LINC01287-203ENST00000454441 CAMTA1Q9Y6Y1 1673 aa16.92■□□□□ 0.3
LINC01287-203ENST00000454441 GCP02774 474 aa16.92■□□□□ 0.3
LINC01287-203ENST00000454441 EVA1CP58658 441 aa16.92■□□□□ 0.3
LINC01287-203ENST00000454441 NLRP6P59044 892 aa16.92■□□□□ 0.3
LINC01287-203ENST00000454441 SF3B2Q13435 895 aaKnown RBP16.92■□□□□ 0.3
LINC01287-203ENST00000454441 SSH2Q76I76 1423 aa16.92■□□□□ 0.3
LINC01287-203ENST00000454441 SPATA31A1Q5TZJ5 1347 aa16.92■□□□□ 0.3
LINC01287-203ENST00000454441 SLIT3O75094 1523 aa16.91■□□□□ 0.3
LINC01287-203ENST00000454441 SBNO2Q9Y2G9 1366 aa16.91■□□□□ 0.3
LINC01287-203ENST00000454441 MON2Q7Z3U7 1717 aa16.91■□□□□ 0.3
LINC01287-203ENST00000454441 HOXD11P31277 338 aaPredicted RBP16.9■□□□□ 0.3
LINC01287-203ENST00000454441 ZNF692Q9BU19 519 aaPredicted RBP16.9■□□□□ 0.3
LINC01287-203ENST00000454441 RGPD1P0DJD0 1748 aa16.9■□□□□ 0.3
LINC01287-203ENST00000454441 ZBTB7CA1YPR0 619 aa16.89■□□□□ 0.29
LINC01287-203ENST00000454441 USP35Q9P2H5 1018 aa16.89■□□□□ 0.29
LINC01287-203ENST00000454441 ZRANB1Q9UGI0 708 aa16.89■□□□□ 0.29
LINC01287-203ENST00000454441 DEFB132Q7Z7B7 95 aa16.88■□□□□ 0.29
LINC01287-203ENST00000454441 COL5A2P05997 1499 aaPredicted RBP16.87■□□□□ 0.29
LINC01287-203ENST00000454441 LARP1Q6PKG0 1096 aaKnown RBP16.87■□□□□ 0.29
LINC01287-203ENST00000454441 TTC21BQ7Z4L5 1316 aa16.87■□□□□ 0.29
LINC01287-203ENST00000454441 KTN1Q86UP2 1357 aaKnown RBP16.87■□□□□ 0.29
LINC01287-203ENST00000454441 CPSF1Q10570 1443 aaKnown RBP16.87■□□□□ 0.29
LINC01287-203ENST00000454441 FAM182BQ5T319 152 aa16.86■□□□□ 0.29
LINC01287-203ENST00000454441 TTC21AQ8NDW8 1320 aa16.86■□□□□ 0.29
LINC01287-203ENST00000454441 TNS1Q9HBL0 1735 aaKnown RBP16.85■□□□□ 0.29
LINC01287-203ENST00000454441 COL18A1P39060 1754 aa16.85■□□□□ 0.29
LINC01287-203ENST00000454441 RGPD5Q99666 1765 aa16.85■□□□□ 0.29
LINC01287-203ENST00000454441 CNKSR2Q8WXI2 1034 aa16.85■□□□□ 0.29
LINC01287-203ENST00000454441 BARGINQ6ZT62 677 aa16.84■□□□□ 0.29
LINC01287-203ENST00000454441 TCP11L2Q8N4U5 519 aa16.84■□□□□ 0.29
LINC01287-203ENST00000454441 BAG6P46379 1132 aa16.83■□□□□ 0.28
LINC01287-203ENST00000454441 AATKQ6ZMQ8 1374 aa16.83■□□□□ 0.28
LINC01287-203ENST00000454441 TMC1Q8TDI8 760 aa16.83■□□□□ 0.28
LINC01287-203ENST00000454441 PARP4Q9UKK3 1724 aaKnown RBP16.83■□□□□ 0.28
LINC01287-203ENST00000454441 CRB1P82279 1406 aa16.82■□□□□ 0.28
LINC01287-203ENST00000454441 SOX12O15370 315 aa16.82■□□□□ 0.28
LINC01287-203ENST00000454441 KCNH5Q8NCM2 988 aa16.82■□□□□ 0.28
LINC01287-203ENST00000454441 THRAP3Q9Y2W1 955 aaKnown RBP16.82■□□□□ 0.28
LINC01287-203ENST00000454441 WNK3Q9BYP7 1800 aa16.82■□□□□ 0.28
LINC01287-203ENST00000454441 USP54Q70EL1 1684 aa16.81■□□□□ 0.28
LINC01287-203ENST00000454441 CD163L1Q9NR16 1453 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms