RNA–Protein interactions for RNA: ENST00000454001.1

RPSAP54-201, Transcript of ribosomal protein SA pseudogene 54, humanhuman

BASIC

Gene RPSAP54, Length 886 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP54-201ENST00000454001 SEPT12Q8IYM1 358 aa11.96□□□□□ -0.49
RPSAP54-201ENST00000454001 ZRANB1Q9UGI0 708 aa11.96□□□□□ -0.49
RPSAP54-201ENST00000454001 COL14A1Q05707 1796 aaKnown RBP11.96□□□□□ -0.49
RPSAP54-201ENST00000454001 DEFB132Q7Z7B7 95 aa11.95□□□□□ -0.5
RPSAP54-201ENST00000454001 BLMP54132 1417 aaPredicted RBP11.94□□□□□ -0.5
RPSAP54-201ENST00000454001 GPRASP1Q5JY77 1395 aa11.94□□□□□ -0.5
RPSAP54-201ENST00000454001 PAK3O75914 559 aaPredicted RBP11.94□□□□□ -0.5
RPSAP54-201ENST00000454001 VPS72Q15906 364 aa11.94□□□□□ -0.5
RPSAP54-201ENST00000454001 EIF3AQ14152 1382 aaKnown RBP11.93□□□□□ -0.5
RPSAP54-201ENST00000454001 PHRF1Q9P1Y6 1649 aaKnown RBP11.93□□□□□ -0.5
RPSAP54-201ENST00000454001 FAM83GA6ND36 823 aa11.93□□□□□ -0.5
RPSAP54-201ENST00000454001 NGDNQ8NEJ9 315 aaKnown RBP11.93□□□□□ -0.5
RPSAP54-201ENST00000454001 BTG4Q9NY30 223 aa11.93□□□□□ -0.5
RPSAP54-201ENST00000454001 ATP7BP35670 1465 aa11.93□□□□□ -0.5
RPSAP54-201ENST00000454001 TOPAZ1Q8N9V7 1692 aa11.92□□□□□ -0.5
RPSAP54-201ENST00000454001 WASLO00401 505 aaPredicted RBP11.92□□□□□ -0.5
RPSAP54-201ENST00000454001 FAM98CQ17RN3 349 aaKnown RBP11.92□□□□□ -0.5
RPSAP54-201ENST00000454001 TONSLQ96HA7 1378 aa11.92□□□□□ -0.5
RPSAP54-201ENST00000454001 SF3B2Q13435 895 aaKnown RBP11.91□□□□□ -0.5
RPSAP54-201ENST00000454001 KRT27Q7Z3Y8 459 aa11.91□□□□□ -0.5
RPSAP54-201ENST00000454001 CCDC125Q86Z20 511 aa11.91□□□□□ -0.5
RPSAP54-201ENST00000454001 FAM182BQ5T319 152 aa11.9□□□□□ -0.5
RPSAP54-201ENST00000454001 NUTM2GQ5VZR2 741 aa11.9□□□□□ -0.5
RPSAP54-201ENST00000454001 RGPD1P0DJD0 1748 aa11.89□□□□□ -0.51
RPSAP54-201ENST00000454001 PRDM11Q9NQV5 511 aa11.89□□□□□ -0.51
RPSAP54-201ENST00000454001 THSD7AQ9UPZ6 1657 aa11.88□□□□□ -0.51
RPSAP54-201ENST00000454001 CHRNA2Q15822 529 aa11.88□□□□□ -0.51
RPSAP54-201ENST00000454001 MIER1Q8N108 512 aa11.88□□□□□ -0.51
RPSAP54-201ENST00000454001 NUDT16Q96DE0 195 aaKnown RBP11.88□□□□□ -0.51
RPSAP54-201ENST00000454001 KIAA0232Q92628 1395 aa11.88□□□□□ -0.51
RPSAP54-201ENST00000454001 TNS1Q9HBL0 1735 aaKnown RBP11.88□□□□□ -0.51
RPSAP54-201ENST00000454001 KIAA1210Q9ULL0 1709 aa11.88□□□□□ -0.51
RPSAP54-201ENST00000454001 NRKQ7Z2Y5 1582 aa11.87□□□□□ -0.51
RPSAP54-201ENST00000454001 QRICH2Q9H0J4 1663 aa11.87□□□□□ -0.51
RPSAP54-201ENST00000454001 PSDA5PKW4 1024 aaPredicted RBP11.86□□□□□ -0.51
RPSAP54-201ENST00000454001 CDK19Q9BWU1 502 aa11.86□□□□□ -0.51
RPSAP54-201ENST00000454001 STRN4Q9NRL3 753 aa11.86□□□□□ -0.51
RPSAP54-201ENST00000454001 SPATA31A5Q5VU36 1347 aa11.86□□□□□ -0.51
RPSAP54-201ENST00000454001 SPATA31A7Q8IWB4 1347 aa11.86□□□□□ -0.51
RPSAP54-201ENST00000454001 ONECUT3O60422 494 aaPredicted RBP11.85□□□□□ -0.51
RPSAP54-201ENST00000454001 ZC3H6P61129 1189 aaKnown RBP11.85□□□□□ -0.51
RPSAP54-201ENST00000454001 USP35Q9P2H5 1018 aa11.84□□□□□ -0.51
RPSAP54-201ENST00000454001 LRP5O75197 1615 aa11.84□□□□□ -0.51
RPSAP54-201ENST00000454001 ACEP12821 1306 aa11.84□□□□□ -0.51
RPSAP54-201ENST00000454001 BAG6P46379 1132 aa11.83□□□□□ -0.52
RPSAP54-201ENST00000454001 EN1Q05925 392 aaPredicted RBP11.83□□□□□ -0.52
RPSAP54-201ENST00000454001 NBPF1Q3BBV0 1214 aa11.83□□□□□ -0.52
RPSAP54-201ENST00000454001 ZBTB7CA1YPR0 619 aa11.82□□□□□ -0.52
RPSAP54-201ENST00000454001 SRPK2P78362 688 aaKnown RBP11.82□□□□□ -0.52
RPSAP54-201ENST00000454001 PPIP5K1Q6PFW1 1433 aa11.82□□□□□ -0.52
RPSAP54-201ENST00000454001 POLR3AO14802 1390 aaPredicted RBP11.81□□□□□ -0.52
RPSAP54-201ENST00000454001 STAC3Q96MF2 364 aa11.81□□□□□ -0.52
RPSAP54-201ENST00000454001 SPATA31A1Q5TZJ5 1347 aa11.81□□□□□ -0.52
RPSAP54-201ENST00000454001 LMO7Q8WWI1 1683 aa11.81□□□□□ -0.52
RPSAP54-201ENST00000454001 SSH2Q76I76 1423 aa11.8□□□□□ -0.52
RPSAP54-201ENST00000454001 NBPF8Q3BBV2 869 aa11.8□□□□□ -0.52
RPSAP54-201ENST00000454001 ABTB2Q8N961 1025 aa11.8□□□□□ -0.52
RPSAP54-201ENST00000454001 CABP2Q9NPB3 220 aa11.8□□□□□ -0.52
RPSAP54-201ENST00000454001 CCDC61Q9Y6R9 512 aa11.8□□□□□ -0.52
RPSAP54-201ENST00000454001 CAMTA1Q9Y6Y1 1673 aa11.8□□□□□ -0.52
RPSAP54-201ENST00000454001 EVA1CP58658 441 aa11.79□□□□□ -0.52
RPSAP54-201ENST00000454001 CENPJQ9HC77 1338 aaPredicted RBP11.79□□□□□ -0.52
RPSAP54-201ENST00000454001 TRIM37O94972 964 aa11.78□□□□□ -0.52
RPSAP54-201ENST00000454001 R3HDM1Q15032 1099 aaKnown RBP11.78□□□□□ -0.52
RPSAP54-201ENST00000454001 LARP1Q6PKG0 1096 aaKnown RBP11.78□□□□□ -0.52
RPSAP54-201ENST00000454001 TRPM1Q7Z4N2 1603 aa11.78□□□□□ -0.52
RPSAP54-201ENST00000454001 PIK3C2AO00443 1686 aa11.78□□□□□ -0.52
RPSAP54-201ENST00000454001 EZH2Q15910 746 aaKnown RBP11.77□□□□□ -0.53
RPSAP54-201ENST00000454001 L3MBTL2Q969R5 705 aa11.77□□□□□ -0.53
RPSAP54-201ENST00000454001 RREB1Q92766 1687 aa11.77□□□□□ -0.53
RPSAP54-201ENST00000454001 NUP188Q5SRE5 1749 aa11.77□□□□□ -0.53
RPSAP54-201ENST00000454001 PLEKHG3A1L390 1219 aa11.76□□□□□ -0.53
RPSAP54-201ENST00000454001 CENPBP07199 599 aaPredicted RBP11.76□□□□□ -0.53
RPSAP54-201ENST00000454001 PARP4Q9UKK3 1724 aaKnown RBP11.76□□□□□ -0.53
RPSAP54-201ENST00000454001 USP19O94966 1318 aa11.76□□□□□ -0.53
RPSAP54-201ENST00000454001 WNK3Q9BYP7 1800 aa11.76□□□□□ -0.53
RPSAP54-201ENST00000454001 DISP2A7MBM2 1401 aa11.76□□□□□ -0.53
RPSAP54-201ENST00000454001 COL5A2P05997 1499 aaPredicted RBP11.76□□□□□ -0.53
RPSAP54-201ENST00000454001 LRRC37A3O60309 1634 aa11.75□□□□□ -0.53
RPSAP54-201ENST00000454001 CPDO75976 1380 aa11.75□□□□□ -0.53
RPSAP54-201ENST00000454001 USP6P35125 1406 aa11.75□□□□□ -0.53
RPSAP54-201ENST00000454001 RGPD5Q99666 1765 aa11.74□□□□□ -0.53
RPSAP54-201ENST00000454001 APBA3O96018 575 aa11.74□□□□□ -0.53
RPSAP54-201ENST00000454001 PDE3BQ13370 1112 aa11.74□□□□□ -0.53
RPSAP54-201ENST00000454001 FAM196AQ6ZSG2 479 aa11.74□□□□□ -0.53
RPSAP54-201ENST00000454001 CABP1Q9NZU7 370 aa11.74□□□□□ -0.53
RPSAP54-201ENST00000454001 AKAP12Q02952 1782 aa11.74□□□□□ -0.53
RPSAP54-201ENST00000454001 SOX12O15370 315 aa11.73□□□□□ -0.53
RPSAP54-201ENST00000454001 SLIT3O75094 1523 aa11.73□□□□□ -0.53
RPSAP54-201ENST00000454001 GCP02774 474 aa11.73□□□□□ -0.53
RPSAP54-201ENST00000454001 NLRP13Q86W25 1043 aa11.73□□□□□ -0.53
RPSAP54-201ENST00000454001 TCP11L2Q8N4U5 519 aa11.73□□□□□ -0.53
RPSAP54-201ENST00000454001 NLRP6P59044 892 aa11.72□□□□□ -0.53
RPSAP54-201ENST00000454001 BARGINQ6ZT62 677 aa11.72□□□□□ -0.53
RPSAP54-201ENST00000454001 SBF2Q86WG5 1849 aa11.72□□□□□ -0.53
RPSAP54-201ENST00000454001 CRB1P82279 1406 aa11.71□□□□□ -0.53
RPSAP54-201ENST00000454001 ROCK2O75116 1388 aaKnown RBP11.71□□□□□ -0.53
RPSAP54-201ENST00000454001 DDX10Q13206 875 aaKnown RBP11.71□□□□□ -0.53
RPSAP54-201ENST00000454001 CAMKK2Q96RR4 588 aa11.71□□□□□ -0.53
RPSAP54-201ENST00000454001 COL18A1P39060 1754 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms