RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 TRDNQ13061 729 aa14.47□□□□□ -0.09
SEC16A-207ENST00000453963 MVPQ14764 893 aaKnown RBP14.47□□□□□ -0.09
SEC16A-207ENST00000453963 NBPF1Q3BBV0 1214 aa14.46□□□□□ -0.09
SEC16A-207ENST00000453963 CNTROBQ8N137 903 aa14.46□□□□□ -0.09
SEC16A-207ENST00000453963 CCDC47Q96A33 483 aaKnown RBP14.46□□□□□ -0.09
SEC16A-207ENST00000453963 UBTFL1P0CB47 393 aaPredicted RBP14.46□□□□□ -0.09
SEC16A-207ENST00000453963 NOM1Q5C9Z4 860 aaKnown RBP14.46□□□□□ -0.1
SEC16A-207ENST00000453963 SNAPC4Q5SXM2 1469 aa14.46□□□□□ -0.1
SEC16A-207ENST00000453963 PRM3Q9NNZ6 103 aa14.45□□□□□ -0.1
SEC16A-207ENST00000453963 HSP90B2PQ58FF3 399 aa14.45□□□□□ -0.1
SEC16A-207ENST00000453963 APPP05067 770 aa14.45□□□□□ -0.1
SEC16A-207ENST00000453963 PRAM1Q96QH2 718 aa14.45□□□□□ -0.1
SEC16A-207ENST00000453963 TIAM1Q13009 1591 aa14.45□□□□□ -0.1
SEC16A-207ENST00000453963 ATF7IPQ6VMQ6 1270 aa14.45□□□□□ -0.1
SEC16A-207ENST00000453963 THEMISQ8N1K5 641 aaPredicted RBP14.45□□□□□ -0.1
SEC16A-207ENST00000453963 SDF4Q9BRK5 362 aa14.45□□□□□ -0.1
SEC16A-207ENST00000453963 RBM10P98175 930 aaKnown RBP14.44□□□□□ -0.1
SEC16A-207ENST00000453963 NOB1Q9ULX3 412 aaKnown RBP14.44□□□□□ -0.1
SEC16A-207ENST00000453963 TOP2BQ02880 1626 aa14.44□□□□□ -0.1
SEC16A-207ENST00000453963 GPRASP1Q5JY77 1395 aa14.44□□□□□ -0.1
SEC16A-207ENST00000453963 RAPGEF3O95398 923 aa14.44□□□□□ -0.1
SEC16A-207ENST00000453963 EHBP1L1Q8N3D4 1523 aa14.44□□□□□ -0.1
SEC16A-207ENST00000453963 PROSER2Q86WR7 435 aaPredicted RBP14.43□□□□□ -0.1
SEC16A-207ENST00000453963 ABTB2Q8N961 1025 aa14.43□□□□□ -0.1
SEC16A-207ENST00000453963 CLASRPQ8N2M8 674 aaKnown RBP14.43□□□□□ -0.1
SEC16A-207ENST00000453963 WDR33Q9C0J8 1336 aaKnown RBP14.43□□□□□ -0.1
SEC16A-207ENST00000453963 SLFN5Q08AF3 891 aa14.43□□□□□ -0.1
SEC16A-207ENST00000453963 TWISTNBQ3B726 338 aaPredicted RBP14.43□□□□□ -0.1
SEC16A-207ENST00000453963 ZSCAN30Q86W11 494 aa14.42□□□□□ -0.1
SEC16A-207ENST00000453963 CWC15Q9P013 229 aaKnown RBP14.42□□□□□ -0.1
SEC16A-207ENST00000453963 CCP110O43303 1012 aa14.42□□□□□ -0.1
SEC16A-207ENST00000453963 DHX8Q14562 1220 aaKnown RBP14.42□□□□□ -0.1
SEC16A-207ENST00000453963 SAFBQ15424 915 aaKnown RBP eCLIP14.42□□□□□ -0.1
SEC16A-207ENST00000453963 CHD1LQ86WJ1 897 aa14.42□□□□□ -0.1
SEC16A-207ENST00000453963 KINO60870 393 aaKnown RBP14.41□□□□□ -0.1
SEC16A-207ENST00000453963 OLFM4Q6UX06 510 aa14.41□□□□□ -0.1
SEC16A-207ENST00000453963 FIBPO43427 364 aa14.41□□□□□ -0.1
SEC16A-207ENST00000453963 CCDC192P0DO97 292 aa14.41□□□□□ -0.1
SEC16A-207ENST00000453963 PRKAR2BP31323 418 aa14.41□□□□□ -0.1
SEC16A-207ENST00000453963 CCDC27Q2M243 656 aa14.41□□□□□ -0.1
SEC16A-207ENST00000453963 PCMTD1Q96MG8 357 aaPredicted RBP14.41□□□□□ -0.1
SEC16A-207ENST00000453963 SLC12A5Q9H2X9 1139 aa14.41□□□□□ -0.1
SEC16A-207ENST00000453963 ESCO1Q5FWF5 840 aa14.41□□□□□ -0.1
SEC16A-207ENST00000453963 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.4□□□□□ -0.1
SEC16A-207ENST00000453963 VPS37DQ86XT2 251 aa14.4□□□□□ -0.1
SEC16A-207ENST00000453963 ERBINQ96RT1 1412 aa14.4□□□□□ -0.1
SEC16A-207ENST00000453963 HIP1O00291 1037 aa14.4□□□□□ -0.1
SEC16A-207ENST00000453963 TSR2Q969E8 191 aaKnown RBP14.4□□□□□ -0.1
SEC16A-207ENST00000453963 FBXW7Q969H0 707 aa14.4□□□□□ -0.1
SEC16A-207ENST00000453963 ZNF428Q96B54 188 aa14.4□□□□□ -0.1
SEC16A-207ENST00000453963 AK7Q96M32 723 aa14.4□□□□□ -0.1
SEC16A-207ENST00000453963 SURF6O75683 361 aaKnown RBP14.4□□□□□ -0.1
SEC16A-207ENST00000453963 TRIM34Q9BYJ4 488 aa14.4□□□□□ -0.1
SEC16A-207ENST00000453963 MEX3CQ5U5Q3 659 aaKnown RBP14.4□□□□□ -0.1
SEC16A-207ENST00000453963 RALYLQ86SE5 291 aaKnown RBP14.4□□□□□ -0.1
SEC16A-207ENST00000453963 KIAA0586Q9BVV6 1533 aa14.4□□□□□ -0.1
SEC16A-207ENST00000453963 UQCRHLA0A096LP55 91 aa14.39□□□□□ -0.11
SEC16A-207ENST00000453963 UQCRHP07919 91 aa14.39□□□□□ -0.11
SEC16A-207ENST00000453963 AEBP1Q8IUX7 1158 aa14.39□□□□□ -0.11
SEC16A-207ENST00000453963 CCDC30Q5VVM6 783 aa14.39□□□□□ -0.11
SEC16A-207ENST00000453963 RUFY1Q96T51 708 aa14.39□□□□□ -0.11
SEC16A-207ENST00000453963 C1orf115Q9H7X2 142 aa14.39□□□□□ -0.11
SEC16A-207ENST00000453963 GAS2L2Q8NHY3 880 aa14.39□□□□□ -0.11
SEC16A-207ENST00000453963 ERCC4Q92889 916 aaPredicted RBP14.39□□□□□ -0.11
SEC16A-207ENST00000453963 NAIPQ13075 1403 aa14.39□□□□□ -0.11
SEC16A-207ENST00000453963 DNMBPQ6XZF7 1577 aa14.39□□□□□ -0.11
SEC16A-207ENST00000453963 ERICH2A1L162 156 aa14.39□□□□□ -0.11
SEC16A-207ENST00000453963 GNAI2P04899 355 aa14.39□□□□□ -0.11
SEC16A-207ENST00000453963 RIC3Q7Z5B4 369 aa14.39□□□□□ -0.11
SEC16A-207ENST00000453963 TCEAL9Q9UHQ7 104 aa14.39□□□□□ -0.11
SEC16A-207ENST00000453963 NFXL1Q6ZNB6 911 aa14.38□□□□□ -0.11
SEC16A-207ENST00000453963 DHX16O60231 1041 aaKnown RBP14.38□□□□□ -0.11
SEC16A-207ENST00000453963 AIMP1Q12904 312 aaKnown RBP14.37□□□□□ -0.11
SEC16A-207ENST00000453963 FSD1Q9BTV5 496 aa14.37□□□□□ -0.11
SEC16A-207ENST00000453963 CDR1P51861 262 aa14.37□□□□□ -0.11
SEC16A-207ENST00000453963 CCDC112Q8NEF3 446 aa14.37□□□□□ -0.11
SEC16A-207ENST00000453963 ZNF692Q9BU19 519 aaPredicted RBP14.37□□□□□ -0.11
SEC16A-207ENST00000453963 RAD21O60216 631 aa14.36□□□□□ -0.11
SEC16A-207ENST00000453963 CTDP1Q9Y5B0 961 aaPredicted RBP14.36□□□□□ -0.11
SEC16A-207ENST00000453963 FOSBP53539 338 aa14.36□□□□□ -0.11
SEC16A-207ENST00000453963 ZNF396Q96N95 335 aaPredicted RBP14.36□□□□□ -0.11
SEC16A-207ENST00000453963 CABP1Q9NZU7 370 aa14.36□□□□□ -0.11
SEC16A-207ENST00000453963 SPC24Q8NBT2 197 aa14.36□□□□□ -0.11
SEC16A-207ENST00000453963 CDK19Q9BWU1 502 aa14.36□□□□□ -0.11
SEC16A-207ENST00000453963 CCT4P50991 539 aaKnown RBP14.35□□□□□ -0.11
SEC16A-207ENST00000453963 KRT85P78386 507 aa14.35□□□□□ -0.11
SEC16A-207ENST00000453963 WWC1Q8IX03 1113 aa14.35□□□□□ -0.11
SEC16A-207ENST00000453963 SLC26A8Q96RN1 970 aa14.35□□□□□ -0.11
SEC16A-207ENST00000453963 PDILTQ8N807 584 aa14.35□□□□□ -0.11
SEC16A-207ENST00000453963 SMC2O95347 1197 aa14.35□□□□□ -0.11
SEC16A-207ENST00000453963 PLEKHO1Q53GL0 409 aaPredicted RBP14.35□□□□□ -0.11
SEC16A-207ENST00000453963 CYP46A1Q9Y6A2 500 aa14.35□□□□□ -0.11
SEC16A-207ENST00000453963 HECW1Q76N89 1606 aa14.35□□□□□ -0.11
SEC16A-207ENST00000453963 RPGRIP1LQ68CZ1 1315 aa14.35□□□□□ -0.11
SEC16A-207ENST00000453963 PDIA4P13667 645 aaKnown RBP14.35□□□□□ -0.11
SEC16A-207ENST00000453963 ANKRD1Q15327 319 aa14.35□□□□□ -0.11
SEC16A-207ENST00000453963 ERC1Q8IUD2 1116 aa14.35□□□□□ -0.11
SEC16A-207ENST00000453963 ANKRD30BQ9BXX2 1392 aa14.34□□□□□ -0.11
SEC16A-207ENST00000453963 SRCIN1Q9C0H9 1055 aa14.34□□□□□ -0.11
SEC16A-207ENST00000453963 DAPK1P53355 1430 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms