RNA–Protein interactions for RNA: ENST00000453711.1

C1orf228-216, Transcript of Uncharacterized protein C1orf228, humanhuman

APPRIS ALT2 TSL 3

Gene C1orf228, Length 502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-216ENST00000453711 ACEP12821 1306 aa17.4■□□□□ 0.38
C1orf228-216ENST00000453711 A0A0G2JS52 829 aa17.39■□□□□ 0.37
C1orf228-216ENST00000453711 MYT1Q01538 1121 aa17.39■□□□□ 0.37
C1orf228-216ENST00000453711 VPS72Q15906 364 aa17.39■□□□□ 0.37
C1orf228-216ENST00000453711 GLI3P10071 1580 aa17.39■□□□□ 0.37
C1orf228-216ENST00000453711 ROCK2O75116 1388 aaKnown RBP17.39■□□□□ 0.37
C1orf228-216ENST00000453711 TOPAZ1Q8N9V7 1692 aa17.39■□□□□ 0.37
C1orf228-216ENST00000453711 QRICH2Q9H0J4 1663 aa17.39■□□□□ 0.37
C1orf228-216ENST00000453711 CABP2Q9NPB3 220 aa17.38■□□□□ 0.37
C1orf228-216ENST00000453711 BTG4Q9NY30 223 aa17.38■□□□□ 0.37
C1orf228-216ENST00000453711 NBPF8Q3BBV2 869 aa17.37■□□□□ 0.37
C1orf228-216ENST00000453711 NUTM2GQ5VZR2 741 aa17.37■□□□□ 0.37
C1orf228-216ENST00000453711 PRDM11Q9NQV5 511 aa17.37■□□□□ 0.37
C1orf228-216ENST00000453711 POLR3AO14802 1390 aaPredicted RBP17.37■□□□□ 0.37
C1orf228-216ENST00000453711 PPIP5K1Q6PFW1 1433 aa17.37■□□□□ 0.37
C1orf228-216ENST00000453711 COL14A1Q05707 1796 aaKnown RBP17.36■□□□□ 0.37
C1orf228-216ENST00000453711 PLEKHG3A1L390 1219 aa17.36■□□□□ 0.37
C1orf228-216ENST00000453711 SEPT12Q8IYM1 358 aa17.36■□□□□ 0.37
C1orf228-216ENST00000453711 TRPM1Q7Z4N2 1603 aa17.36■□□□□ 0.37
C1orf228-216ENST00000453711 ABTB2Q8N961 1025 aa17.34■□□□□ 0.37
C1orf228-216ENST00000453711 EVC2Q86UK5 1308 aa17.33■□□□□ 0.36
C1orf228-216ENST00000453711 CRYBG1Q9Y4K1 1723 aa17.33■□□□□ 0.36
C1orf228-216ENST00000453711 KIAA0232Q92628 1395 aa17.32■□□□□ 0.36
C1orf228-216ENST00000453711 TONSLQ96HA7 1378 aa17.32■□□□□ 0.36
C1orf228-216ENST00000453711 CCDC125Q86Z20 511 aa17.32■□□□□ 0.36
C1orf228-216ENST00000453711 NRAPQ86VF7 1730 aa17.32■□□□□ 0.36
C1orf228-216ENST00000453711 ZC3H6P61129 1189 aaKnown RBP17.31■□□□□ 0.36
C1orf228-216ENST00000453711 CHRNA2Q15822 529 aa17.31■□□□□ 0.36
C1orf228-216ENST00000453711 FAM98CQ17RN3 349 aaKnown RBP17.31■□□□□ 0.36
C1orf228-216ENST00000453711 PHRF1Q9P1Y6 1649 aaKnown RBP17.31■□□□□ 0.36
C1orf228-216ENST00000453711 EP400Q96L91 3159 aa17.3■□□□□ 0.36
C1orf228-216ENST00000453711 TRIM26Q12899 539 aaPredicted RBP17.3■□□□□ 0.36
C1orf228-216ENST00000453711 KRT27Q7Z3Y8 459 aa17.3■□□□□ 0.36
C1orf228-216ENST00000453711 STRN4Q9NRL3 753 aa17.3■□□□□ 0.36
C1orf228-216ENST00000453711 CABP1Q9NZU7 370 aa17.3■□□□□ 0.36
C1orf228-216ENST00000453711 SF3B2Q13435 895 aaKnown RBP17.29■□□□□ 0.36
C1orf228-216ENST00000453711 NLRP13Q86W25 1043 aa17.28■□□□□ 0.36
C1orf228-216ENST00000453711 BRWD3Q6RI45 1802 aa17.28■□□□□ 0.36
C1orf228-216ENST00000453711 SPATA31A5Q5VU36 1347 aa17.27■□□□□ 0.36
C1orf228-216ENST00000453711 SPATA31A7Q8IWB4 1347 aa17.27■□□□□ 0.36
C1orf228-216ENST00000453711 ONECUT3O60422 494 aaPredicted RBP17.27■□□□□ 0.36
C1orf228-216ENST00000453711 EVA1CP58658 441 aa17.27■□□□□ 0.36
C1orf228-216ENST00000453711 CARD11Q9BXL7 1154 aa17.27■□□□□ 0.36
C1orf228-216ENST00000453711 BLMP54132 1417 aaPredicted RBP17.27■□□□□ 0.35
C1orf228-216ENST00000453711 USP6P35125 1406 aa17.26■□□□□ 0.35
C1orf228-216ENST00000453711 NRKQ7Z2Y5 1582 aa17.26■□□□□ 0.35
C1orf228-216ENST00000453711 BRD4O60885 1362 aaPredicted RBP17.26■□□□□ 0.35
C1orf228-216ENST00000453711 ZBTB7CA1YPR0 619 aa17.25■□□□□ 0.35
C1orf228-216ENST00000453711 USP19O94966 1318 aa17.24■□□□□ 0.35
C1orf228-216ENST00000453711 NLRP6P59044 892 aa17.24■□□□□ 0.35
C1orf228-216ENST00000453711 USP35Q9P2H5 1018 aa17.24■□□□□ 0.35
C1orf228-216ENST00000453711 ZRANB1Q9UGI0 708 aa17.24■□□□□ 0.35
C1orf228-216ENST00000453711 SPATA31A1Q5TZJ5 1347 aa17.22■□□□□ 0.35
C1orf228-216ENST00000453711 GCP02774 474 aa17.22■□□□□ 0.35
C1orf228-216ENST00000453711 CPDO75976 1380 aa17.22■□□□□ 0.35
C1orf228-216ENST00000453711 SSH2Q76I76 1423 aa17.21■□□□□ 0.34
C1orf228-216ENST00000453711 DEFB132Q7Z7B7 95 aa17.2■□□□□ 0.34
C1orf228-216ENST00000453711 ZNF692Q9BU19 519 aaPredicted RBP17.2■□□□□ 0.34
C1orf228-216ENST00000453711 FAM182BQ5T319 152 aa17.19■□□□□ 0.34
C1orf228-216ENST00000453711 KTN1Q86UP2 1357 aaKnown RBP17.18■□□□□ 0.34
C1orf228-216ENST00000453711 SBNO2Q9Y2G9 1366 aa17.18■□□□□ 0.34
C1orf228-216ENST00000453711 THSD7AQ9UPZ6 1657 aa17.18■□□□□ 0.34
C1orf228-216ENST00000453711 CAMTA1Q9Y6Y1 1673 aa17.18■□□□□ 0.34
C1orf228-216ENST00000453711 LARP1Q6PKG0 1096 aaKnown RBP17.18■□□□□ 0.34
C1orf228-216ENST00000453711 TMC1Q8TDI8 760 aa17.18■□□□□ 0.34
C1orf228-216ENST00000453711 PIK3C2AO00443 1686 aa17.17■□□□□ 0.34
C1orf228-216ENST00000453711 SOX12O15370 315 aa17.17■□□□□ 0.34
C1orf228-216ENST00000453711 BAG6P46379 1132 aa17.17■□□□□ 0.34
C1orf228-216ENST00000453711 TTC21BQ7Z4L5 1316 aa17.17■□□□□ 0.34
C1orf228-216ENST00000453711 LMO7Q8WWI1 1683 aa17.16■□□□□ 0.34
C1orf228-216ENST00000453711 TCP11L2Q8N4U5 519 aa17.16■□□□□ 0.34
C1orf228-216ENST00000453711 TTC21AQ8NDW8 1320 aa17.16■□□□□ 0.34
C1orf228-216ENST00000453711 SLIT3O75094 1523 aa17.16■□□□□ 0.34
C1orf228-216ENST00000453711 PDE3BQ13370 1112 aa17.15■□□□□ 0.34
C1orf228-216ENST00000453711 COL5A2P05997 1499 aaPredicted RBP17.15■□□□□ 0.34
C1orf228-216ENST00000453711 AKAP12Q02952 1782 aa17.15■□□□□ 0.34
C1orf228-216ENST00000453711 BARGINQ6ZT62 677 aa17.14■□□□□ 0.33
C1orf228-216ENST00000453711 KCNH5Q8NCM2 988 aa17.14■□□□□ 0.33
C1orf228-216ENST00000453711 HDGFL2Q7Z4V5 671 aaPredicted RBP17.13■□□□□ 0.33
C1orf228-216ENST00000453711 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.13■□□□□ 0.33
C1orf228-216ENST00000453711 AATKQ6ZMQ8 1374 aa17.13■□□□□ 0.33
C1orf228-216ENST00000453711 CPSF1Q10570 1443 aaKnown RBP17.13■□□□□ 0.33
C1orf228-216ENST00000453711 FAM196AQ6ZSG2 479 aa17.12■□□□□ 0.33
C1orf228-216ENST00000453711 TOM1L2Q6ZVM7 507 aa17.12■□□□□ 0.33
C1orf228-216ENST00000453711 THRAP3Q9Y2W1 955 aaKnown RBP17.12■□□□□ 0.33
C1orf228-216ENST00000453711 RGPD1P0DJD0 1748 aa17.12■□□□□ 0.33
C1orf228-216ENST00000453711 CRB1P82279 1406 aa17.12■□□□□ 0.33
C1orf228-216ENST00000453711 CSB-PGBD3P0DP91 1061 aa17.1■□□□□ 0.33
C1orf228-216ENST00000453711 MON2Q7Z3U7 1717 aa17.1■□□□□ 0.33
C1orf228-216ENST00000453711 ST20-MTHFSA0A0A6YYL1 179 aa17.09■□□□□ 0.33
C1orf228-216ENST00000453711 TRIM37O94972 964 aa17.09■□□□□ 0.33
C1orf228-216ENST00000453711 EN1Q05925 392 aaPredicted RBP17.09■□□□□ 0.33
C1orf228-216ENST00000453711 SLC12A5Q9H2X9 1139 aa17.09■□□□□ 0.33
C1orf228-216ENST00000453711 TERF2IPQ9NYB0 399 aa17.09■□□□□ 0.33
C1orf228-216ENST00000453711 ARHGEF25Q86VW2 580 aa17.07■□□□□ 0.32
C1orf228-216ENST00000453711 NME9Q86XW9 330 aa17.07■□□□□ 0.32
C1orf228-216ENST00000453711 AXIN2Q9Y2T1 843 aa17.07■□□□□ 0.32
C1orf228-216ENST00000453711 CD163L1Q9NR16 1453 aa17.06■□□□□ 0.32
C1orf228-216ENST00000453711 WDR17Q8IZU2 1322 aa17.06■□□□□ 0.32
C1orf228-216ENST00000453711 SLC24A1O60721 1099 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms