RNA–Protein interactions for RNA: ENST00000453615.1

PSMD4-206, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-206ENST00000453615 PLEKHG3A1L390 1219 aa12.3□□□□□ -0.44
PSMD4-206ENST00000453615 SF3B2Q13435 895 aaKnown RBP12.3□□□□□ -0.44
PSMD4-206ENST00000453615 NBPF8Q3BBV2 869 aa12.3□□□□□ -0.44
PSMD4-206ENST00000453615 ITSN1Q15811 1721 aa12.3□□□□□ -0.44
PSMD4-206ENST00000453615 ACEP12821 1306 aa12.3□□□□□ -0.44
PSMD4-206ENST00000453615 POLR3AO14802 1390 aaPredicted RBP12.3□□□□□ -0.44
PSMD4-206ENST00000453615 SRCAPQ6ZRS2 3230 aa12.3□□□□□ -0.44
PSMD4-206ENST00000453615 TRPM3Q9HCF6 1732 aaPredicted RBP12.29□□□□□ -0.44
PSMD4-206ENST00000453615 NWD2Q9ULI1 1742 aa12.29□□□□□ -0.44
PSMD4-206ENST00000453615 NEUROD1Q13562 356 aa12.29□□□□□ -0.44
PSMD4-206ENST00000453615 GLI3P10071 1580 aa12.29□□□□□ -0.44
PSMD4-206ENST00000453615 ONECUT3O60422 494 aaPredicted RBP12.28□□□□□ -0.44
PSMD4-206ENST00000453615 KRT27Q7Z3Y8 459 aa12.28□□□□□ -0.44
PSMD4-206ENST00000453615 ZRANB1Q9UGI0 708 aa12.28□□□□□ -0.44
PSMD4-206ENST00000453615 PLCH1Q4KWH8 1693 aa12.28□□□□□ -0.44
PSMD4-206ENST00000453615 ALS2Q96Q42 1657 aa12.28□□□□□ -0.44
PSMD4-206ENST00000453615 ABCA3Q99758 1704 aa12.28□□□□□ -0.44
PSMD4-206ENST00000453615 BLMP54132 1417 aaPredicted RBP12.28□□□□□ -0.44
PSMD4-206ENST00000453615 ABTB2Q8N961 1025 aa12.27□□□□□ -0.45
PSMD4-206ENST00000453615 EVC2Q86UK5 1308 aa12.27□□□□□ -0.45
PSMD4-206ENST00000453615 BRD4O60885 1362 aaPredicted RBP12.27□□□□□ -0.45
PSMD4-206ENST00000453615 ROCK2O75116 1388 aaKnown RBP12.27□□□□□ -0.45
PSMD4-206ENST00000453615 PPIP5K1Q6PFW1 1433 aa12.27□□□□□ -0.45
PSMD4-206ENST00000453615 COL14A1Q05707 1796 aaKnown RBP12.26□□□□□ -0.45
PSMD4-206ENST00000453615 FAM98CQ17RN3 349 aaKnown RBP12.26□□□□□ -0.45
PSMD4-206ENST00000453615 NUTM2GQ5VZR2 741 aa12.26□□□□□ -0.45
PSMD4-206ENST00000453615 SIN3AQ96ST3 1273 aa12.26□□□□□ -0.45
PSMD4-206ENST00000453615 KIAA0232Q92628 1395 aa12.26□□□□□ -0.45
PSMD4-206ENST00000453615 ZC3H6P61129 1189 aaKnown RBP12.25□□□□□ -0.45
PSMD4-206ENST00000453615 NLRP13Q86W25 1043 aa12.25□□□□□ -0.45
PSMD4-206ENST00000453615 CABP2Q9NPB3 220 aa12.25□□□□□ -0.45
PSMD4-206ENST00000453615 SPATA31A5Q5VU36 1347 aa12.25□□□□□ -0.45
PSMD4-206ENST00000453615 SPATA31A7Q8IWB4 1347 aa12.25□□□□□ -0.45
PSMD4-206ENST00000453615 EVA1CP58658 441 aa12.24□□□□□ -0.45
PSMD4-206ENST00000453615 TOPAZ1Q8N9V7 1692 aa12.23□□□□□ -0.45
PSMD4-206ENST00000453615 CHRNA2Q15822 529 aa12.23□□□□□ -0.45
PSMD4-206ENST00000453615 STRN4Q9NRL3 753 aa12.23□□□□□ -0.45
PSMD4-206ENST00000453615 CABP1Q9NZU7 370 aa12.23□□□□□ -0.45
PSMD4-206ENST00000453615 USP19O94966 1318 aa12.22□□□□□ -0.45
PSMD4-206ENST00000453615 CPDO75976 1380 aa12.21□□□□□ -0.45
PSMD4-206ENST00000453615 SPATA31A1Q5TZJ5 1347 aa12.21□□□□□ -0.45
PSMD4-206ENST00000453615 GCP02774 474 aa12.21□□□□□ -0.45
PSMD4-206ENST00000453615 BAG6P46379 1132 aa12.21□□□□□ -0.45
PSMD4-206ENST00000453615 QRICH2Q9H0J4 1663 aa12.21□□□□□ -0.45
PSMD4-206ENST00000453615 TONSLQ96HA7 1378 aa12.2□□□□□ -0.46
PSMD4-206ENST00000453615 NLRP6P59044 892 aa12.2□□□□□ -0.46
PSMD4-206ENST00000453615 ZNF692Q9BU19 519 aaPredicted RBP12.2□□□□□ -0.46
PSMD4-206ENST00000453615 NRAPQ86VF7 1730 aa12.2□□□□□ -0.46
PSMD4-206ENST00000453615 USP6P35125 1406 aa12.2□□□□□ -0.46
PSMD4-206ENST00000453615 TRPM1Q7Z4N2 1603 aa12.19□□□□□ -0.46
PSMD4-206ENST00000453615 CARD11Q9BXL7 1154 aa12.19□□□□□ -0.46
PSMD4-206ENST00000453615 USP35Q9P2H5 1018 aa12.19□□□□□ -0.46
PSMD4-206ENST00000453615 CRYBG1Q9Y4K1 1723 aa12.19□□□□□ -0.46
PSMD4-206ENST00000453615 PHRF1Q9P1Y6 1649 aaKnown RBP12.19□□□□□ -0.46
PSMD4-206ENST00000453615 DEFB132Q7Z7B7 95 aa12.18□□□□□ -0.46
PSMD4-206ENST00000453615 SSH2Q76I76 1423 aa12.18□□□□□ -0.46
PSMD4-206ENST00000453615 BRWD3Q6RI45 1802 aa12.17□□□□□ -0.46
PSMD4-206ENST00000453615 ZBTB7CA1YPR0 619 aa12.17□□□□□ -0.46
PSMD4-206ENST00000453615 PDE3BQ13370 1112 aa12.17□□□□□ -0.46
PSMD4-206ENST00000453615 BARGINQ6ZT62 677 aa12.17□□□□□ -0.46
PSMD4-206ENST00000453615 TCP11L2Q8N4U5 519 aa12.17□□□□□ -0.46
PSMD4-206ENST00000453615 THRAP3Q9Y2W1 955 aaKnown RBP12.17□□□□□ -0.46
PSMD4-206ENST00000453615 NRKQ7Z2Y5 1582 aa12.17□□□□□ -0.46
PSMD4-206ENST00000453615 SBNO2Q9Y2G9 1366 aa12.17□□□□□ -0.46
PSMD4-206ENST00000453615 TTC21AQ8NDW8 1320 aa12.16□□□□□ -0.46
PSMD4-206ENST00000453615 TRIM26Q12899 539 aaPredicted RBP12.16□□□□□ -0.46
PSMD4-206ENST00000453615 LARP1Q6PKG0 1096 aaKnown RBP12.16□□□□□ -0.46
PSMD4-206ENST00000453615 FAM196AQ6ZSG2 479 aa12.16□□□□□ -0.46
PSMD4-206ENST00000453615 KCNH5Q8NCM2 988 aa12.16□□□□□ -0.46
PSMD4-206ENST00000453615 AATKQ6ZMQ8 1374 aa12.15□□□□□ -0.46
PSMD4-206ENST00000453615 KTN1Q86UP2 1357 aaKnown RBP12.15□□□□□ -0.46
PSMD4-206ENST00000453615 TTC21BQ7Z4L5 1316 aa12.14□□□□□ -0.47
PSMD4-206ENST00000453615 THSD7AQ9UPZ6 1657 aa12.14□□□□□ -0.47
PSMD4-206ENST00000453615 CAMTA1Q9Y6Y1 1673 aa12.14□□□□□ -0.47
PSMD4-206ENST00000453615 C11orf95C9JLR9 678 aaPredicted RBP12.14□□□□□ -0.47
PSMD4-206ENST00000453615 SLC24A1O60721 1099 aa12.14□□□□□ -0.47
PSMD4-206ENST00000453615 FAM182BQ5T319 152 aa12.14□□□□□ -0.47
PSMD4-206ENST00000453615 HDGFL2Q7Z4V5 671 aaPredicted RBP12.13□□□□□ -0.47
PSMD4-206ENST00000453615 CRB1P82279 1406 aa12.12□□□□□ -0.47
PSMD4-206ENST00000453615 TMC1Q8TDI8 760 aa12.12□□□□□ -0.47
PSMD4-206ENST00000453615 COL5A2P05997 1499 aaPredicted RBP12.12□□□□□ -0.47
PSMD4-206ENST00000453615 CPSF1Q10570 1443 aaKnown RBP12.11□□□□□ -0.47
PSMD4-206ENST00000453615 SLIT3O75094 1523 aa12.11□□□□□ -0.47
PSMD4-206ENST00000453615 LMO7Q8WWI1 1683 aa12.11□□□□□ -0.47
PSMD4-206ENST00000453615 SOX12O15370 315 aa12.11□□□□□ -0.47
PSMD4-206ENST00000453615 TRIM37O94972 964 aa12.11□□□□□ -0.47
PSMD4-206ENST00000453615 EN1Q05925 392 aaPredicted RBP12.11□□□□□ -0.47
PSMD4-206ENST00000453615 TOM1L2Q6ZVM7 507 aa12.11□□□□□ -0.47
PSMD4-206ENST00000453615 TERF2IPQ9NYB0 399 aa12.11□□□□□ -0.47
PSMD4-206ENST00000453615 DISP2A7MBM2 1401 aa12.11□□□□□ -0.47
PSMD4-206ENST00000453615 PARD3Q8TEW0 1356 aa12.1□□□□□ -0.47
PSMD4-206ENST00000453615 APBA3O96018 575 aa12.1□□□□□ -0.47
PSMD4-206ENST00000453615 CSB-PGBD3P0DP91 1061 aa12.1□□□□□ -0.47
PSMD4-206ENST00000453615 ARHGEF25Q86VW2 580 aa12.1□□□□□ -0.47
PSMD4-206ENST00000453615 PUS7Q96PZ0 661 aaKnown RBP12.1□□□□□ -0.47
PSMD4-206ENST00000453615 CDCA7Q9BWT1 371 aaPredicted RBP12.1□□□□□ -0.47
PSMD4-206ENST00000453615 WDR17Q8IZU2 1322 aa12.1□□□□□ -0.47
PSMD4-206ENST00000453615 RGPD1P0DJD0 1748 aa12.09□□□□□ -0.47
PSMD4-206ENST00000453615 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.09□□□□□ -0.47
PSMD4-206ENST00000453615 PIK3C2AO00443 1686 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms