RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 NUTM2EB1AL46 878 aaPredicted RBP20.21■□□□□ 0.83
NCKIPSD-207ENST00000453349 NUTM2AQ8IVF1 878 aaPredicted RBP20.21■□□□□ 0.83
NCKIPSD-207ENST00000453349 SHPRHQ149N8 1683 aa20.21■□□□□ 0.83
NCKIPSD-207ENST00000453349 TRPM3Q9HCF6 1732 aaPredicted RBP20.21■□□□□ 0.83
NCKIPSD-207ENST00000453349 AKAP12Q02952 1782 aa20.21■□□□□ 0.83
NCKIPSD-207ENST00000453349 KIF7Q2M1P5 1343 aa20.2■□□□□ 0.82
NCKIPSD-207ENST00000453349 TTC21BQ7Z4L5 1316 aa20.2■□□□□ 0.82
NCKIPSD-207ENST00000453349 ANKRD36BQ8N2N9 1353 aa20.2■□□□□ 0.82
NCKIPSD-207ENST00000453349 CD163L1Q9NR16 1453 aa20.19■□□□□ 0.82
NCKIPSD-207ENST00000453349 HAP1P54257 671 aaPredicted RBP20.19■□□□□ 0.82
NCKIPSD-207ENST00000453349 TTC21AQ8NDW8 1320 aa20.19■□□□□ 0.82
NCKIPSD-207ENST00000453349 A0A1W2PP64 1363 aa20.19■□□□□ 0.82
NCKIPSD-207ENST00000453349 PLEKHG5O94827 1062 aa20.18■□□□□ 0.82
NCKIPSD-207ENST00000453349 NLRP13Q86W25 1043 aa20.18■□□□□ 0.82
NCKIPSD-207ENST00000453349 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.18■□□□□ 0.82
NCKIPSD-207ENST00000453349 NUTM2GQ5VZR2 741 aa20.17■□□□□ 0.82
NCKIPSD-207ENST00000453349 SSH2Q76I76 1423 aa20.17■□□□□ 0.82
NCKIPSD-207ENST00000453349 EDC4Q6P2E9 1401 aaKnown RBP20.16■□□□□ 0.82
NCKIPSD-207ENST00000453349 COL22A1Q8NFW1 1626 aaPredicted RBP20.16■□□□□ 0.82
NCKIPSD-207ENST00000453349 ALS2Q96Q42 1657 aa20.16■□□□□ 0.82
NCKIPSD-207ENST00000453349 NLRP6P59044 892 aa20.15■□□□□ 0.82
NCKIPSD-207ENST00000453349 MEX3CQ5U5Q3 659 aaKnown RBP20.15■□□□□ 0.82
NCKIPSD-207ENST00000453349 CCDC7Q96M83 1385 aa20.15■□□□□ 0.82
NCKIPSD-207ENST00000453349 MON2Q7Z3U7 1717 aa20.15■□□□□ 0.82
NCKIPSD-207ENST00000453349 MYOM1P52179 1685 aa20.14■□□□□ 0.81
NCKIPSD-207ENST00000453349 WASHC2AQ641Q2 1341 aa20.14■□□□□ 0.81
NCKIPSD-207ENST00000453349 CABLES1Q8TDN4 633 aa20.14■□□□□ 0.81
NCKIPSD-207ENST00000453349 PANK3Q9H999 370 aa20.14■□□□□ 0.81
NCKIPSD-207ENST00000453349 ADAMTS2O95450 1211 aa20.11■□□□□ 0.81
NCKIPSD-207ENST00000453349 CARD14Q9BXL6 1004 aa20.11■□□□□ 0.81
NCKIPSD-207ENST00000453349 NRKQ7Z2Y5 1582 aa20.1■□□□□ 0.81
NCKIPSD-207ENST00000453349 NME9Q86XW9 330 aa20.1■□□□□ 0.81
NCKIPSD-207ENST00000453349 MED1Q15648 1581 aaPredicted RBP20.08■□□□□ 0.81
NCKIPSD-207ENST00000453349 LRP6O75581 1613 aa20.07■□□□□ 0.8
NCKIPSD-207ENST00000453349 GCP02774 474 aa20.07■□□□□ 0.8
NCKIPSD-207ENST00000453349 KCNH5Q8NCM2 988 aa20.07■□□□□ 0.8
NCKIPSD-207ENST00000453349 COG3Q96JB2 828 aa20.07■□□□□ 0.8
NCKIPSD-207ENST00000453349 ZRANB1Q9UGI0 708 aa20.07■□□□□ 0.8
NCKIPSD-207ENST00000453349 NSD3Q9BZ95 1437 aa20.07■□□□□ 0.8
NCKIPSD-207ENST00000453349 USP31Q70CQ4 1352 aa20.07■□□□□ 0.8
NCKIPSD-207ENST00000453349 USP19O94966 1318 aa20.06■□□□□ 0.8
NCKIPSD-207ENST00000453349 FYB1O15117 783 aa20.06■□□□□ 0.8
NCKIPSD-207ENST00000453349 NGLY1Q96IV0 654 aa20.06■□□□□ 0.8
NCKIPSD-207ENST00000453349 C8orf37Q96NL8 207 aa20.06■□□□□ 0.8
NCKIPSD-207ENST00000453349 PHF23Q9BUL5 403 aaPredicted RBP20.06■□□□□ 0.8
NCKIPSD-207ENST00000453349 KNSTRNQ9Y448 316 aa20.06■□□□□ 0.8
NCKIPSD-207ENST00000453349 PIK3C2AO00443 1686 aa20.06■□□□□ 0.8
NCKIPSD-207ENST00000453349 CGNL1Q0VF96 1302 aa20.05■□□□□ 0.8
NCKIPSD-207ENST00000453349 ZC3H6P61129 1189 aaKnown RBP20.04■□□□□ 0.8
NCKIPSD-207ENST00000453349 GGNBP2Q9H3C7 697 aa20.04■□□□□ 0.8
NCKIPSD-207ENST00000453349 SOX12O15370 315 aa20.02■□□□□ 0.8
NCKIPSD-207ENST00000453349 FAM83GA6ND36 823 aa20.01■□□□□ 0.79
NCKIPSD-207ENST00000453349 ZNF316A6NFI3 1004 aaPredicted RBP20.01■□□□□ 0.79
NCKIPSD-207ENST00000453349 PRDM11Q9NQV5 511 aa20.01■□□□□ 0.79
NCKIPSD-207ENST00000453349 ABCA3Q99758 1704 aa20.01■□□□□ 0.79
NCKIPSD-207ENST00000453349 CRYBG1Q9Y4K1 1723 aa20.01■□□□□ 0.79
NCKIPSD-207ENST00000453349 PHRF1Q9P1Y6 1649 aaKnown RBP20.01■□□□□ 0.79
NCKIPSD-207ENST00000453349 MARF1Q9Y4F3 1742 aaKnown RBP20■□□□□ 0.79
NCKIPSD-207ENST00000453349 SLIT3O75094 1523 aa19.99■□□□□ 0.79
NCKIPSD-207ENST00000453349 ZBTB7CA1YPR0 619 aa19.99■□□□□ 0.79
NCKIPSD-207ENST00000453349 AFF2P51816 1311 aa19.99■□□□□ 0.79
NCKIPSD-207ENST00000453349 KIAA0232Q92628 1395 aa19.98■□□□□ 0.79
NCKIPSD-207ENST00000453349 PER1O15534 1290 aaPredicted RBP19.98■□□□□ 0.79
NCKIPSD-207ENST00000453349 ZNF772Q68DY9 489 aaPredicted RBP19.98■□□□□ 0.79
NCKIPSD-207ENST00000453349 OVOS2A0A0J9YW53 1432 aa19.98■□□□□ 0.79
NCKIPSD-207ENST00000453349 OVOS2Q6IE36 1432 aa19.98■□□□□ 0.79
NCKIPSD-207ENST00000453349 KIF20BQ96Q89 1820 aa19.97■□□□□ 0.79
NCKIPSD-207ENST00000453349 USP54Q70EL1 1684 aa19.97■□□□□ 0.79
NCKIPSD-207ENST00000453349 CHRNA2Q15822 529 aa19.97■□□□□ 0.79
NCKIPSD-207ENST00000453349 FNBP4Q8N3X1 1017 aaPredicted RBP19.97■□□□□ 0.79
NCKIPSD-207ENST00000453349 USP21Q9UK80 565 aa19.97■□□□□ 0.79
NCKIPSD-207ENST00000453349 CPDO75976 1380 aa19.96■□□□□ 0.79
NCKIPSD-207ENST00000453349 NSD2O96028 1365 aa19.95■□□□□ 0.79
NCKIPSD-207ENST00000453349 DDX10Q13206 875 aaKnown RBP19.95■□□□□ 0.78
NCKIPSD-207ENST00000453349 ARHGEF25Q86VW2 580 aa19.95■□□□□ 0.78
NCKIPSD-207ENST00000453349 MORC1Q86VD1 984 aa19.94■□□□□ 0.78
NCKIPSD-207ENST00000453349 BTG4Q9NY30 223 aa19.94■□□□□ 0.78
NCKIPSD-207ENST00000453349 COL14A1Q05707 1796 aaKnown RBP19.93■□□□□ 0.78
NCKIPSD-207ENST00000453349 EVA1CP58658 441 aa19.93■□□□□ 0.78
NCKIPSD-207ENST00000453349 AMER1Q5JTC6 1135 aaPredicted RBP19.93■□□□□ 0.78
NCKIPSD-207ENST00000453349 UNC5CLQ8IV45 518 aa19.93■□□□□ 0.78
NCKIPSD-207ENST00000453349 QTRT2Q9H974 415 aaKnown RBP19.92■□□□□ 0.78
NCKIPSD-207ENST00000453349 RGS17Q9UGC6 210 aaPredicted RBP19.92■□□□□ 0.78
NCKIPSD-207ENST00000453349 CC2D1BQ5T0F9 858 aaKnown RBP19.91■□□□□ 0.78
NCKIPSD-207ENST00000453349 AATKQ6ZMQ8 1374 aa19.91■□□□□ 0.78
NCKIPSD-207ENST00000453349 SLIT2O94813 1529 aa19.91■□□□□ 0.78
NCKIPSD-207ENST00000453349 NFAT5O94916 1531 aa19.91■□□□□ 0.78
NCKIPSD-207ENST00000453349 FBLN1P23142 703 aa19.9■□□□□ 0.78
NCKIPSD-207ENST00000453349 AMPHP49418 695 aa19.9■□□□□ 0.78
NCKIPSD-207ENST00000453349 CNGB1Q14028 1251 aaPredicted RBP19.9■□□□□ 0.78
NCKIPSD-207ENST00000453349 TRPC5Q9UL62 973 aaPredicted RBP19.9■□□□□ 0.78
NCKIPSD-207ENST00000453349 TNNT2P45379 298 aaPredicted RBP19.89■□□□□ 0.77
NCKIPSD-207ENST00000453349 BCL9LQ86UU0 1499 aa19.89■□□□□ 0.77
NCKIPSD-207ENST00000453349 PLCH1Q4KWH8 1693 aa19.88■□□□□ 0.77
NCKIPSD-207ENST00000453349 NPC1L1Q9UHC9 1359 aa19.88■□□□□ 0.77
NCKIPSD-207ENST00000453349 RRS1Q15050 365 aaKnown RBP19.88■□□□□ 0.77
NCKIPSD-207ENST00000453349 STRN4Q9NRL3 753 aa19.88■□□□□ 0.77
NCKIPSD-207ENST00000453349 CCDC9Q9Y3X0 531 aaKnown RBP19.88■□□□□ 0.77
NCKIPSD-207ENST00000453349 NWD2Q9ULI1 1742 aa19.88■□□□□ 0.77
NCKIPSD-207ENST00000453349 ANKRD26Q9UPS8 1709 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms