RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 QTRT2Q9H974 415 aaKnown RBP22.86■■□□□ 1.25
SCAMP4-205ENST00000452128 SLIT2O94813 1529 aa22.84■■□□□ 1.25
SCAMP4-205ENST00000452128 LMOD2Q6P5Q4 547 aa22.84■■□□□ 1.25
SCAMP4-205ENST00000452128 BRD4O60885 1362 aaPredicted RBP22.84■■□□□ 1.25
SCAMP4-205ENST00000452128 FAM83GA6ND36 823 aa22.83■■□□□ 1.25
SCAMP4-205ENST00000452128 USP21Q9UK80 565 aa22.83■■□□□ 1.25
SCAMP4-205ENST00000452128 PAK3O75914 559 aaPredicted RBP22.82■■□□□ 1.24
SCAMP4-205ENST00000452128 RXRBP28702 533 aa22.82■■□□□ 1.24
SCAMP4-205ENST00000452128 ATRNO75882 1429 aa22.82■■□□□ 1.24
SCAMP4-205ENST00000452128 CPSF1Q10570 1443 aaKnown RBP22.82■■□□□ 1.24
SCAMP4-205ENST00000452128 ATAD2Q6PL18 1390 aa22.81■■□□□ 1.24
SCAMP4-205ENST00000452128 USP6P35125 1406 aa22.81■■□□□ 1.24
SCAMP4-205ENST00000452128 RBM6P78332 1123 aaKnown RBP22.8■■□□□ 1.24
SCAMP4-205ENST00000452128 ZNF692Q9BU19 519 aaPredicted RBP22.79■■□□□ 1.24
SCAMP4-205ENST00000452128 TRPC5Q9UL62 973 aaPredicted RBP22.79■■□□□ 1.24
SCAMP4-205ENST00000452128 MARF1Q9Y4F3 1742 aaKnown RBP22.79■■□□□ 1.24
SCAMP4-205ENST00000452128 CDK12Q9NYV4 1490 aaPredicted RBP22.79■■□□□ 1.24
SCAMP4-205ENST00000452128 UNC5CLQ8IV45 518 aa22.78■■□□□ 1.24
SCAMP4-205ENST00000452128 ABCA3Q99758 1704 aa22.78■■□□□ 1.24
SCAMP4-205ENST00000452128 USP19O94966 1318 aa22.78■■□□□ 1.24
SCAMP4-205ENST00000452128 USP47Q96K76 1375 aa22.77■■□□□ 1.24
SCAMP4-205ENST00000452128 CRYBG1Q9Y4K1 1723 aa22.77■■□□□ 1.24
SCAMP4-205ENST00000452128 CD163L1Q9NR16 1453 aa22.77■■□□□ 1.24
SCAMP4-205ENST00000452128 SLC24A1O60721 1099 aa22.75■■□□□ 1.23
SCAMP4-205ENST00000452128 NUTM2GQ5VZR2 741 aa22.75■■□□□ 1.23
SCAMP4-205ENST00000452128 ABTB2Q8N961 1025 aa22.75■■□□□ 1.23
SCAMP4-205ENST00000452128 SLC12A5Q9H2X9 1139 aa22.75■■□□□ 1.23
SCAMP4-205ENST00000452128 PLEKHG5O94827 1062 aa22.74■■□□□ 1.23
SCAMP4-205ENST00000452128 TTC21BQ7Z4L5 1316 aa22.74■■□□□ 1.23
SCAMP4-205ENST00000452128 HAP1P54257 671 aaPredicted RBP22.72■■□□□ 1.23
SCAMP4-205ENST00000452128 GJD4Q96KN9 370 aaPredicted RBP22.72■■□□□ 1.23
SCAMP4-205ENST00000452128 VPS72Q15906 364 aa22.71■■□□□ 1.23
SCAMP4-205ENST00000452128 NLRP13Q86W25 1043 aa22.71■■□□□ 1.23
SCAMP4-205ENST00000452128 GCP02774 474 aa22.7■■□□□ 1.22
SCAMP4-205ENST00000452128 RGS12O14924 1447 aa22.7■■□□□ 1.22
SCAMP4-205ENST00000452128 CPDO75976 1380 aa22.69■■□□□ 1.22
SCAMP4-205ENST00000452128 KIAA0232Q92628 1395 aa22.69■■□□□ 1.22
SCAMP4-205ENST00000452128 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.68■■□□□ 1.22
SCAMP4-205ENST00000452128 TTC21AQ8NDW8 1320 aa22.68■■□□□ 1.22
SCAMP4-205ENST00000452128 ONECUT3O60422 494 aaPredicted RBP22.68■■□□□ 1.22
SCAMP4-205ENST00000452128 KTN1Q86UP2 1357 aaKnown RBP22.67■■□□□ 1.22
SCAMP4-205ENST00000452128 NLRP6P59044 892 aa22.67■■□□□ 1.22
SCAMP4-205ENST00000452128 BTG4Q9NY30 223 aa22.67■■□□□ 1.22
SCAMP4-205ENST00000452128 AKAP12Q02952 1782 aa22.66■■□□□ 1.22
SCAMP4-205ENST00000452128 ZC3H6P61129 1189 aaKnown RBP22.66■■□□□ 1.22
SCAMP4-205ENST00000452128 NWD2Q9ULI1 1742 aa22.65■■□□□ 1.22
SCAMP4-205ENST00000452128 TMF1P82094 1093 aa22.65■■□□□ 1.22
SCAMP4-205ENST00000452128 TMC1Q8TDI8 760 aa22.65■■□□□ 1.22
SCAMP4-205ENST00000452128 PRDM11Q9NQV5 511 aa22.65■■□□□ 1.22
SCAMP4-205ENST00000452128 USP31Q70CQ4 1352 aa22.64■■□□□ 1.22
SCAMP4-205ENST00000452128 PHRF1Q9P1Y6 1649 aaKnown RBP22.64■■□□□ 1.22
SCAMP4-205ENST00000452128 NINLQ9Y2I6 1382 aa22.64■■□□□ 1.22
SCAMP4-205ENST00000452128 GLI3P10071 1580 aa22.64■■□□□ 1.22
SCAMP4-205ENST00000452128 SLIT3O75094 1523 aa22.64■■□□□ 1.21
SCAMP4-205ENST00000452128 CHRNA2Q15822 529 aa22.64■■□□□ 1.21
SCAMP4-205ENST00000452128 PIK3C2AO00443 1686 aa22.64■■□□□ 1.21
SCAMP4-205ENST00000452128 A0A1W2PP64 1363 aa22.63■■□□□ 1.21
SCAMP4-205ENST00000452128 NRKQ7Z2Y5 1582 aa22.63■■□□□ 1.21
SCAMP4-205ENST00000452128 COL14A1Q05707 1796 aaKnown RBP22.63■■□□□ 1.21
SCAMP4-205ENST00000452128 PLCH1Q4KWH8 1693 aa22.62■■□□□ 1.21
SCAMP4-205ENST00000452128 TERF2IPQ9NYB0 399 aa22.62■■□□□ 1.21
SCAMP4-205ENST00000452128 ZRANB1Q9UGI0 708 aa22.62■■□□□ 1.21
SCAMP4-205ENST00000452128 NRAPQ86VF7 1730 aa22.61■■□□□ 1.21
SCAMP4-205ENST00000452128 MON2Q7Z3U7 1717 aa22.6■■□□□ 1.21
SCAMP4-205ENST00000452128 EDC4Q6P2E9 1401 aaKnown RBP22.6■■□□□ 1.21
SCAMP4-205ENST00000452128 HDGFL2Q7Z4V5 671 aaPredicted RBP22.6■■□□□ 1.21
SCAMP4-205ENST00000452128 SPATA31A5Q5VU36 1347 aa22.59■■□□□ 1.21
SCAMP4-205ENST00000452128 SPATA31A7Q8IWB4 1347 aa22.59■■□□□ 1.21
SCAMP4-205ENST00000452128 CAMTA1Q9Y6Y1 1673 aa22.59■■□□□ 1.21
SCAMP4-205ENST00000452128 ARHGEF25Q86VW2 580 aa22.59■■□□□ 1.21
SCAMP4-205ENST00000452128 NME9Q86XW9 330 aa22.59■■□□□ 1.21
SCAMP4-205ENST00000452128 UPF1Q92900 1129 aaKnown RBP eCLIP22.59■■□□□ 1.21
SCAMP4-205ENST00000452128 HSPA5P11021 654 aaKnown RBP22.58■■□□□ 1.21
SCAMP4-205ENST00000452128 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.58■■□□□ 1.21
SCAMP4-205ENST00000452128 AATKQ6ZMQ8 1374 aa22.58■■□□□ 1.21
SCAMP4-205ENST00000452128 LMO7Q8WWI1 1683 aa22.57■■□□□ 1.2
SCAMP4-205ENST00000452128 ANKRD36BQ8N2N9 1353 aa22.56■■□□□ 1.2
SCAMP4-205ENST00000452128 EIF4G2P78344 907 aaKnown RBP eCLIP22.56■■□□□ 1.2
SCAMP4-205ENST00000452128 CDCA8Q53HL2 280 aa22.56■■□□□ 1.2
SCAMP4-205ENST00000452128 AXIN2Q9Y2T1 843 aa22.55■■□□□ 1.2
SCAMP4-205ENST00000452128 NFAT5O94916 1531 aa22.54■■□□□ 1.2
SCAMP4-205ENST00000452128 SEPT12Q8IYM1 358 aa22.54■■□□□ 1.2
SCAMP4-205ENST00000452128 KCNH5Q8NCM2 988 aa22.54■■□□□ 1.2
SCAMP4-205ENST00000452128 SPATA31A1Q5TZJ5 1347 aa22.54■■□□□ 1.2
SCAMP4-205ENST00000452128 CARD14Q9BXL6 1004 aa22.53■■□□□ 1.2
SCAMP4-205ENST00000452128 USP54Q70EL1 1684 aa22.52■■□□□ 1.2
SCAMP4-205ENST00000452128 OVOS2A0A0J9YW53 1432 aa22.52■■□□□ 1.2
SCAMP4-205ENST00000452128 OVOS2Q6IE36 1432 aa22.52■■□□□ 1.2
SCAMP4-205ENST00000452128 COL18A1P39060 1754 aa22.52■■□□□ 1.2
SCAMP4-205ENST00000452128 LARP1Q6PKG0 1096 aaKnown RBP22.51■■□□□ 1.19
SCAMP4-205ENST00000452128 EP400Q96L91 3159 aa22.51■■□□□ 1.19
SCAMP4-205ENST00000452128 C11orf95C9JLR9 678 aaPredicted RBP22.5■■□□□ 1.19
SCAMP4-205ENST00000452128 CCDC9Q9Y3X0 531 aaKnown RBP22.5■■□□□ 1.19
SCAMP4-205ENST00000452128 COL5A2P05997 1499 aaPredicted RBP22.49■■□□□ 1.19
SCAMP4-205ENST00000452128 FYB1O15117 783 aa22.49■■□□□ 1.19
SCAMP4-205ENST00000452128 FAM98CQ17RN3 349 aaKnown RBP22.49■■□□□ 1.19
SCAMP4-205ENST00000452128 STRN4Q9NRL3 753 aa22.49■■□□□ 1.19
SCAMP4-205ENST00000452128 BARGINQ6ZT62 677 aa22.47■■□□□ 1.19
SCAMP4-205ENST00000452128 EVA1CP58658 441 aa22.46■■□□□ 1.19
SCAMP4-205ENST00000452128 SOX12O15370 315 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms