RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 E9PSI1 815 aa19.99■□□□□ 0.79
CCHCR1-208ENST00000451521 EXOC6Q8TAG9 804 aa19.99■□□□□ 0.79
CCHCR1-208ENST00000451521 ADGRB2O60241 1585 aa19.99■□□□□ 0.79
CCHCR1-208ENST00000451521 PHF23Q9BUL5 403 aaPredicted RBP19.98■□□□□ 0.79
CCHCR1-208ENST00000451521 SPINK5Q9NQ38 1064 aaPredicted RBP19.98■□□□□ 0.79
CCHCR1-208ENST00000451521 NKTRP30414 1462 aaKnown RBP19.98■□□□□ 0.79
CCHCR1-208ENST00000451521 WWC1Q8IX03 1113 aa19.98■□□□□ 0.79
CCHCR1-208ENST00000451521 PPIP5K1Q6PFW1 1433 aa19.97■□□□□ 0.79
CCHCR1-208ENST00000451521 CDC42BPGQ6DT37 1551 aa19.97■□□□□ 0.79
CCHCR1-208ENST00000451521 MON2Q7Z3U7 1717 aa19.96■□□□□ 0.79
CCHCR1-208ENST00000451521 NCKAP5LQ9HCH0 1330 aa19.96■□□□□ 0.79
CCHCR1-208ENST00000451521 ROBO2Q9HCK4 1378 aa19.96■□□□□ 0.79
CCHCR1-208ENST00000451521 NUTM2FA1L443 756 aa19.96■□□□□ 0.79
CCHCR1-208ENST00000451521 PNPLA6Q8IY17 1366 aa19.96■□□□□ 0.79
CCHCR1-208ENST00000451521 EDC4Q6P2E9 1401 aaKnown RBP19.96■□□□□ 0.79
CCHCR1-208ENST00000451521 AKAP12Q02952 1782 aa19.96■□□□□ 0.79
CCHCR1-208ENST00000451521 TCP11L2Q8N4U5 519 aa19.95■□□□□ 0.78
CCHCR1-208ENST00000451521 CCDC27Q2M243 656 aa19.95■□□□□ 0.78
CCHCR1-208ENST00000451521 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.95■□□□□ 0.78
CCHCR1-208ENST00000451521 DMRT2Q9Y5R5 561 aa19.95■□□□□ 0.78
CCHCR1-208ENST00000451521 PLIN1O60240 522 aa19.94■□□□□ 0.78
CCHCR1-208ENST00000451521 NUDT16Q96DE0 195 aaKnown RBP19.94■□□□□ 0.78
CCHCR1-208ENST00000451521 EID1Q9Y6B2 187 aa19.94■□□□□ 0.78
CCHCR1-208ENST00000451521 CCDC61Q9Y6R9 512 aa19.93■□□□□ 0.78
CCHCR1-208ENST00000451521 ITSN1Q15811 1721 aa19.92■□□□□ 0.78
CCHCR1-208ENST00000451521 U2AF1L5P0DN76 240 aaPredicted RBP19.92■□□□□ 0.78
CCHCR1-208ENST00000451521 U2AF1Q01081 240 aaKnown RBP eCLIP19.92■□□□□ 0.78
CCHCR1-208ENST00000451521 PTPRUQ92729 1446 aa19.92■□□□□ 0.78
CCHCR1-208ENST00000451521 DIP2AQ14689 1571 aa19.92■□□□□ 0.78
CCHCR1-208ENST00000451521 WDR63Q8IWG1 891 aa19.91■□□□□ 0.78
CCHCR1-208ENST00000451521 TOPAZ1Q8N9V7 1692 aa19.91■□□□□ 0.78
CCHCR1-208ENST00000451521 TBX22Q9Y458 520 aa19.9■□□□□ 0.78
CCHCR1-208ENST00000451521 THEMISQ8N1K5 641 aaPredicted RBP19.9■□□□□ 0.78
CCHCR1-208ENST00000451521 PLEKHF1Q96S99 279 aa19.9■□□□□ 0.78
CCHCR1-208ENST00000451521 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.89■□□□□ 0.77
CCHCR1-208ENST00000451521 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.89■□□□□ 0.77
CCHCR1-208ENST00000451521 RBM33Q96EV2 1170 aaKnown RBP19.89■□□□□ 0.77
CCHCR1-208ENST00000451521 CRBNQ96SW2 442 aa19.89■□□□□ 0.77
CCHCR1-208ENST00000451521 PRR36Q9H6K5 1346 aa19.89■□□□□ 0.77
CCHCR1-208ENST00000451521 MAP2P11137 1827 aaKnown RBP19.89■□□□□ 0.77
CCHCR1-208ENST00000451521 RRP7AQ9Y3A4 280 aaKnown RBP19.88■□□□□ 0.77
CCHCR1-208ENST00000451521 PTCH1Q13635 1447 aa19.87■□□□□ 0.77
CCHCR1-208ENST00000451521 C20orf194Q5TEA3 1177 aa19.87■□□□□ 0.77
CCHCR1-208ENST00000451521 ZNF692Q9BU19 519 aaPredicted RBP19.87■□□□□ 0.77
CCHCR1-208ENST00000451521 DIAPH1O60610 1272 aaKnown RBP19.86■□□□□ 0.77
CCHCR1-208ENST00000451521 POLKQ9UBT6 870 aa19.86■□□□□ 0.77
CCHCR1-208ENST00000451521 AATKQ6ZMQ8 1374 aa19.86■□□□□ 0.77
CCHCR1-208ENST00000451521 NEUROD2Q15784 382 aa19.86■□□□□ 0.77
CCHCR1-208ENST00000451521 NRKQ7Z2Y5 1582 aa19.85■□□□□ 0.77
CCHCR1-208ENST00000451521 FBLN1P23142 703 aa19.85■□□□□ 0.77
CCHCR1-208ENST00000451521 CEP170BQ9Y4F5 1589 aaPredicted RBP19.85■□□□□ 0.77
CCHCR1-208ENST00000451521 U2SURPO15042 1029 aaKnown RBP19.84■□□□□ 0.77
CCHCR1-208ENST00000451521 XRN1Q8IZH2 1706 aaKnown RBP19.84■□□□□ 0.77
CCHCR1-208ENST00000451521 NME9Q86XW9 330 aa19.83■□□□□ 0.77
CCHCR1-208ENST00000451521 PLEKHG3A1L390 1219 aa19.83■□□□□ 0.76
CCHCR1-208ENST00000451521 AMOTL2Q9Y2J4 779 aa19.83■□□□□ 0.76
CCHCR1-208ENST00000451521 PNNQ9H307 717 aaKnown RBP19.82■□□□□ 0.76
CCHCR1-208ENST00000451521 CDK12Q9NYV4 1490 aaPredicted RBP19.82■□□□□ 0.76
CCHCR1-208ENST00000451521 ADAMTSL3P82987 1691 aa19.81■□□□□ 0.76
CCHCR1-208ENST00000451521 BCAR3O75815 825 aa19.81■□□□□ 0.76
CCHCR1-208ENST00000451521 TMPOP42166 694 aaKnown RBP19.81■□□□□ 0.76
CCHCR1-208ENST00000451521 FCHSD2O94868 740 aa19.79■□□□□ 0.76
CCHCR1-208ENST00000451521 NPM2Q86SE8 214 aaKnown RBP19.79■□□□□ 0.76
CCHCR1-208ENST00000451521 COG3Q96JB2 828 aa19.79■□□□□ 0.76
CCHCR1-208ENST00000451521 MAPK8IP3Q9UPT6 1336 aa19.79■□□□□ 0.76
CCHCR1-208ENST00000451521 ZNF142P52746 1687 aaPredicted RBP19.79■□□□□ 0.76
CCHCR1-208ENST00000451521 ZRANB1Q9UGI0 708 aa19.79■□□□□ 0.76
CCHCR1-208ENST00000451521 LRRC7Q96NW7 1537 aa19.78■□□□□ 0.76
CCHCR1-208ENST00000451521 MYH16Q9H6N6 1097 aa19.78■□□□□ 0.76
CCHCR1-208ENST00000451521 PIK3R4Q99570 1358 aa19.78■□□□□ 0.76
CCHCR1-208ENST00000451521 NEFMP07197 916 aa19.78■□□□□ 0.76
CCHCR1-208ENST00000451521 USP35Q9P2H5 1018 aa19.78■□□□□ 0.76
CCHCR1-208ENST00000451521 TRIM35Q9UPQ4 493 aa19.78■□□□□ 0.76
CCHCR1-208ENST00000451521 LAS1LQ9Y4W2 734 aaKnown RBP19.78■□□□□ 0.76
CCHCR1-208ENST00000451521 ACEP12821 1306 aa19.77■□□□□ 0.76
CCHCR1-208ENST00000451521 USP6P35125 1406 aa19.76■□□□□ 0.75
CCHCR1-208ENST00000451521 KCNA6P17658 529 aa19.76■□□□□ 0.75
CCHCR1-208ENST00000451521 RSPH6AQ9H0K4 717 aa19.76■□□□□ 0.75
CCHCR1-208ENST00000451521 EMILIN1Q9Y6C2 1016 aa19.76■□□□□ 0.75
CCHCR1-208ENST00000451521 IL16Q14005 1332 aa19.76■□□□□ 0.75
CCHCR1-208ENST00000451521 TTC21BQ7Z4L5 1316 aa19.76■□□□□ 0.75
CCHCR1-208ENST00000451521 EIF5BO60841 1220 aaKnown RBP19.76■□□□□ 0.75
CCHCR1-208ENST00000451521 NALCNQ8IZF0 1738 aa19.75■□□□□ 0.75
CCHCR1-208ENST00000451521 RARSP54136 660 aaKnown RBP19.75■□□□□ 0.75
CCHCR1-208ENST00000451521 PDE3AQ14432 1141 aa19.75■□□□□ 0.75
CCHCR1-208ENST00000451521 SSH2Q76I76 1423 aa19.75■□□□□ 0.75
CCHCR1-208ENST00000451521 IL13P35225 146 aa19.75■□□□□ 0.75
CCHCR1-208ENST00000451521 TCERG1O14776 1098 aaKnown RBP19.74■□□□□ 0.75
CCHCR1-208ENST00000451521 OVOS2A0A0J9YW53 1432 aa19.74■□□□□ 0.75
CCHCR1-208ENST00000451521 OVOS2Q6IE36 1432 aa19.74■□□□□ 0.75
CCHCR1-208ENST00000451521 PPM1GO15355 546 aaPredicted RBP19.74■□□□□ 0.75
CCHCR1-208ENST00000451521 KDM2BQ8NHM5 1336 aa19.74■□□□□ 0.75
CCHCR1-208ENST00000451521 CT47B1P0C2W7 299 aaPredicted RBP19.73■□□□□ 0.75
CCHCR1-208ENST00000451521 RGPD8O14715 1765 aaPredicted RBP19.72■□□□□ 0.75
CCHCR1-208ENST00000451521 PDE4AP27815 886 aa19.72■□□□□ 0.75
CCHCR1-208ENST00000451521 RIPK4P57078 832 aa19.72■□□□□ 0.75
CCHCR1-208ENST00000451521 PRKAR2BP31323 418 aa19.7■□□□□ 0.74
CCHCR1-208ENST00000451521 ANKLE2Q86XL3 938 aa19.7■□□□□ 0.74
CCHCR1-208ENST00000451521 PMFBP1Q8TBY8 1022 aa19.7■□□□□ 0.74
CCHCR1-208ENST00000451521 CHD2O14647 1828 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms