RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 LMO7Q8WWI1 1683 aa8.95□□□□□ -0.98
USP46-202ENST00000451218 NUDCQ9Y266 331 aa8.95□□□□□ -0.98
USP46-202ENST00000451218 NFAT5O94916 1531 aa8.95□□□□□ -0.98
USP46-202ENST00000451218 MINK1Q8N4C8 1332 aaPredicted RBP8.95□□□□□ -0.98
USP46-202ENST00000451218 CDK12Q9NYV4 1490 aaPredicted RBP8.94□□□□□ -0.98
USP46-202ENST00000451218 STK26Q9P289 416 aa8.94□□□□□ -0.98
USP46-202ENST00000451218 KNSTRNQ9Y448 316 aa8.93□□□□□ -0.98
USP46-202ENST00000451218 WASLO00401 505 aaPredicted RBP8.93□□□□□ -0.98
USP46-202ENST00000451218 TMC1Q8TDI8 760 aa8.93□□□□□ -0.98
USP46-202ENST00000451218 USP6P35125 1406 aa8.93□□□□□ -0.98
USP46-202ENST00000451218 CNGB1Q14028 1251 aaPredicted RBP8.92□□□□□ -0.98
USP46-202ENST00000451218 SAFB2Q14151 953 aaKnown RBP eCLIP8.92□□□□□ -0.98
USP46-202ENST00000451218 DUSP27Q5VZP5 1158 aa8.92□□□□□ -0.98
USP46-202ENST00000451218 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.92□□□□□ -0.98
USP46-202ENST00000451218 USP31Q70CQ4 1352 aa8.92□□□□□ -0.98
USP46-202ENST00000451218 COL18A1P39060 1754 aa8.92□□□□□ -0.98
USP46-202ENST00000451218 RGPD5Q99666 1765 aa8.92□□□□□ -0.98
USP46-202ENST00000451218 PIK3R4Q99570 1358 aa8.92□□□□□ -0.98
USP46-202ENST00000451218 TXNDC2Q86VQ3 553 aa8.92□□□□□ -0.98
USP46-202ENST00000451218 ABCA3Q99758 1704 aa8.91□□□□□ -0.98
USP46-202ENST00000451218 AATKQ6ZMQ8 1374 aa8.91□□□□□ -0.98
USP46-202ENST00000451218 CABP1Q9NZU7 370 aa8.91□□□□□ -0.98
USP46-202ENST00000451218 TBX22Q9Y458 520 aa8.91□□□□□ -0.98
USP46-202ENST00000451218 ADAMTS7Q9UKP4 1686 aa8.91□□□□□ -0.98
USP46-202ENST00000451218 MST1RQ04912 1400 aa8.9□□□□□ -0.98
USP46-202ENST00000451218 N4BP2Q86UW6 1770 aaPredicted RBP8.9□□□□□ -0.98
USP46-202ENST00000451218 ZRANB1Q9UGI0 708 aa8.9□□□□□ -0.98
USP46-202ENST00000451218 SIPA1L3O60292 1781 aaPredicted RBP8.9□□□□□ -0.98
USP46-202ENST00000451218 LMTK3Q96Q04 1460 aa8.9□□□□□ -0.98
USP46-202ENST00000451218 ANKARQ7Z5J8 1434 aa8.9□□□□□ -0.99
USP46-202ENST00000451218 FBLN1P23142 703 aa8.89□□□□□ -0.99
USP46-202ENST00000451218 SLIT3O75094 1523 aa8.89□□□□□ -0.99
USP46-202ENST00000451218 CGNL1Q0VF96 1302 aa8.89□□□□□ -0.99
USP46-202ENST00000451218 FAM208AQ9UK61 1670 aaKnown RBP8.88□□□□□ -0.99
USP46-202ENST00000451218 PLEKHG3A1L390 1219 aa8.88□□□□□ -0.99
USP46-202ENST00000451218 KIF1AQ12756 1690 aa8.88□□□□□ -0.99
USP46-202ENST00000451218 MTHFSP49914 203 aa8.87□□□□□ -0.99
USP46-202ENST00000451218 MED1Q15648 1581 aaPredicted RBP8.87□□□□□ -0.99
USP46-202ENST00000451218 SLFN5Q08AF3 891 aa8.87□□□□□ -0.99
USP46-202ENST00000451218 SLC26A8Q96RN1 970 aa8.87□□□□□ -0.99
USP46-202ENST00000451218 POLKQ9UBT6 870 aa8.87□□□□□ -0.99
USP46-202ENST00000451218 IRX6P78412 446 aaPredicted RBP8.86□□□□□ -0.99
USP46-202ENST00000451218 NUDT16Q96DE0 195 aaKnown RBP8.86□□□□□ -0.99
USP46-202ENST00000451218 GGNBP2Q9H3C7 697 aa8.86□□□□□ -0.99
USP46-202ENST00000451218 NCAPD2Q15021 1401 aa8.86□□□□□ -0.99
USP46-202ENST00000451218 ADGRL3Q9HAR2 1447 aa8.86□□□□□ -0.99
USP46-202ENST00000451218 NPHP4O75161 1426 aaPredicted RBP8.86□□□□□ -0.99
USP46-202ENST00000451218 CCDC146Q8IYE0 955 aa8.85□□□□□ -0.99
USP46-202ENST00000451218 SHANK3Q9BYB0 1731 aa8.85□□□□□ -0.99
USP46-202ENST00000451218 KCNA6P17658 529 aa8.85□□□□□ -0.99
USP46-202ENST00000451218 TRIM35Q9UPQ4 493 aa8.85□□□□□ -0.99
USP46-202ENST00000451218 AMOTL2Q9Y2J4 779 aa8.85□□□□□ -0.99
USP46-202ENST00000451218 TRHP20396 242 aaPredicted RBP8.85□□□□□ -0.99
USP46-202ENST00000451218 NME9Q86XW9 330 aa8.85□□□□□ -0.99
USP46-202ENST00000451218 PDE3BQ13370 1112 aa8.85□□□□□ -0.99
USP46-202ENST00000451218 KDM3BQ7LBC6 1761 aa8.84□□□□□ -0.99
USP46-202ENST00000451218 GLI3P10071 1580 aa8.84□□□□□ -0.99
USP46-202ENST00000451218 SRPK2P78362 688 aaKnown RBP8.84□□□□□ -0.99
USP46-202ENST00000451218 CCDC27Q2M243 656 aa8.84□□□□□ -0.99
USP46-202ENST00000451218 WWC1Q8IX03 1113 aa8.84□□□□□ -0.99
USP46-202ENST00000451218 IL13P35225 146 aa8.84□□□□□ -1
USP46-202ENST00000451218 TSHZ2Q9NRE2 1034 aa8.84□□□□□ -1
USP46-202ENST00000451218 RRP1P56182 461 aaKnown RBP8.83□□□□□ -1
USP46-202ENST00000451218 C20orf194Q5TEA3 1177 aa8.83□□□□□ -1
USP46-202ENST00000451218 RSPH6AQ9H0K4 717 aa8.83□□□□□ -1
USP46-202ENST00000451218 APAF1O14727 1248 aa8.83□□□□□ -1
USP46-202ENST00000451218 ACEP12821 1306 aa8.82□□□□□ -1
USP46-202ENST00000451218 ERICH6BQ5W0A0 696 aa8.82□□□□□ -1
USP46-202ENST00000451218 CCDC61Q9Y6R9 512 aa8.82□□□□□ -1
USP46-202ENST00000451218 MORC1Q86VD1 984 aa8.82□□□□□ -1
USP46-202ENST00000451218 POGKQ9P215 609 aa8.82□□□□□ -1
USP46-202ENST00000451218 NHSL1Q5SYE7 1610 aa8.81□□□□□ -1
USP46-202ENST00000451218 THEMISQ8N1K5 641 aaPredicted RBP8.81□□□□□ -1
USP46-202ENST00000451218 TTC21BQ7Z4L5 1316 aa8.81□□□□□ -1
USP46-202ENST00000451218 STAG3Q9UJ98 1225 aa8.81□□□□□ -1
USP46-202ENST00000451218 KDM4FA0A1W2PPD8 638 aa8.81□□□□□ -1
USP46-202ENST00000451218 EMILIN1Q9Y6C2 1016 aa8.81□□□□□ -1
USP46-202ENST00000451218 TUBGCP6Q96RT7 1819 aa8.81□□□□□ -1
USP46-202ENST00000451218 KDRP35968 1356 aa8.8□□□□□ -1
USP46-202ENST00000451218 BCANQ96GW7 911 aa8.8□□□□□ -1
USP46-202ENST00000451218 PXDNQ92626 1479 aa8.8□□□□□ -1
USP46-202ENST00000451218 TNNT2P45379 298 aaPredicted RBP8.8□□□□□ -1
USP46-202ENST00000451218 TERF2IPQ9NYB0 399 aa8.79□□□□□ -1
USP46-202ENST00000451218 KDM2BQ8NHM5 1336 aa8.79□□□□□ -1
USP46-202ENST00000451218 PKD1L3Q7Z443 1732 aa8.79□□□□□ -1
USP46-202ENST00000451218 RCAN3Q9UKA8 241 aa8.79□□□□□ -1
USP46-202ENST00000451218 TCP11L2Q8N4U5 519 aa8.79□□□□□ -1
USP46-202ENST00000451218 RUNDC1Q96C34 613 aa8.78□□□□□ -1
USP46-202ENST00000451218 PHACTR3Q96KR7 559 aa8.78□□□□□ -1
USP46-202ENST00000451218 SALL2Q9Y467 1007 aaPredicted RBP8.78□□□□□ -1
USP46-202ENST00000451218 PLIN1O60240 522 aa8.77□□□□□ -1.01
USP46-202ENST00000451218 WNK3Q9BYP7 1800 aa8.77□□□□□ -1.01
USP46-202ENST00000451218 C1orf167Q5SNV9 1468 aa8.77□□□□□ -1.01
USP46-202ENST00000451218 RGS12O14924 1447 aa8.77□□□□□ -1.01
USP46-202ENST00000451218 CRB1P82279 1406 aa8.77□□□□□ -1.01
USP46-202ENST00000451218 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.76□□□□□ -1.01
USP46-202ENST00000451218 EXOC6Q8TAG9 804 aa8.76□□□□□ -1.01
USP46-202ENST00000451218 ESF1Q9H501 851 aaKnown RBP8.76□□□□□ -1.01
USP46-202ENST00000451218 SCN11AQ9UI33 1791 aa8.76□□□□□ -1.01
USP46-202ENST00000451218 DCCP43146 1447 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms