RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 GOPCQ9HD26 462 aa9.79□□□□□ -0.84
GTF3C3-207ENST00000451088 MYT1Q01538 1121 aa9.78□□□□□ -0.84
GTF3C3-207ENST00000451088 PPP2R2DQ66LE6 453 aa9.78□□□□□ -0.84
GTF3C3-207ENST00000451088 HELBQ8NG08 1087 aaPredicted RBP9.78□□□□□ -0.84
GTF3C3-207ENST00000451088 CTHP32929 405 aa9.77□□□□□ -0.85
GTF3C3-207ENST00000451088 BAP1Q92560 729 aa9.77□□□□□ -0.85
GTF3C3-207ENST00000451088 TSC1Q92574 1164 aa9.77□□□□□ -0.85
GTF3C3-207ENST00000451088 MAP10Q9P2G4 905 aa9.77□□□□□ -0.85
GTF3C3-207ENST00000451088 SIAH2O43255 324 aa9.76□□□□□ -0.85
GTF3C3-207ENST00000451088 AVPP01185 164 aa9.76□□□□□ -0.85
GTF3C3-207ENST00000451088 TTC24A2A3L6 582 aaPredicted RBP9.75□□□□□ -0.85
GTF3C3-207ENST00000451088 ZNF511Q8NB15 262 aa9.75□□□□□ -0.85
GTF3C3-207ENST00000451088 SMPD1P17405 629 aa9.74□□□□□ -0.85
GTF3C3-207ENST00000451088 CTDSPL2Q05D32 466 aa9.74□□□□□ -0.85
GTF3C3-207ENST00000451088 LINC01559Q495D7 138 aa9.74□□□□□ -0.85
GTF3C3-207ENST00000451088 CRIPAKQ8N1N5 446 aa9.74□□□□□ -0.85
GTF3C3-207ENST00000451088 IL27Q8NEV9 243 aa9.74□□□□□ -0.85
GTF3C3-207ENST00000451088 EHBP1Q8NDI1 1231 aa9.73□□□□□ -0.85
GTF3C3-207ENST00000451088 J3QL48 77 aa9.72□□□□□ -0.85
GTF3C3-207ENST00000451088 AAASQ9NRG9 546 aa9.71□□□□□ -0.86
GTF3C3-207ENST00000451088 VARSP26640 1264 aaKnown RBP9.7□□□□□ -0.86
GTF3C3-207ENST00000451088 SMCPP49901 116 aaPredicted RBP9.7□□□□□ -0.86
GTF3C3-207ENST00000451088 CTC1Q2NKJ3 1217 aa9.69□□□□□ -0.86
GTF3C3-207ENST00000451088 ARMC2Q8NEN0 867 aa9.69□□□□□ -0.86
GTF3C3-207ENST00000451088 PCMTD1Q96MG8 357 aaPredicted RBP9.69□□□□□ -0.86
GTF3C3-207ENST00000451088 ATP1B4Q9UN42 357 aaPredicted RBP9.69□□□□□ -0.86
GTF3C3-207ENST00000451088 NISCHQ9Y2I1 1504 aa9.68□□□□□ -0.86
GTF3C3-207ENST00000451088 MPNDQ8N594 471 aa9.68□□□□□ -0.86
GTF3C3-207ENST00000451088 LRRN4Q8WUT4 740 aa9.68□□□□□ -0.86
GTF3C3-207ENST00000451088 ST8SIA5O15466 376 aa9.67□□□□□ -0.86
GTF3C3-207ENST00000451088 PRKCSHP14314 528 aaPredicted RBP9.67□□□□□ -0.86
GTF3C3-207ENST00000451088 RFC5P40937 340 aa9.67□□□□□ -0.86
GTF3C3-207ENST00000451088 FOXJ1Q92949 421 aa9.67□□□□□ -0.86
GTF3C3-207ENST00000451088 AP1G2O75843 785 aa9.66□□□□□ -0.86
GTF3C3-207ENST00000451088 ALDH1A1P00352 501 aa9.66□□□□□ -0.86
GTF3C3-207ENST00000451088 C4orf48Q5BLP8 95 aa9.65□□□□□ -0.86
GTF3C3-207ENST00000451088 NBPF14Q5TI25 921 aa9.65□□□□□ -0.86
GTF3C3-207ENST00000451088 SH3RF1Q7Z6J0 888 aa9.65□□□□□ -0.86
GTF3C3-207ENST00000451088 HPS1Q92902 700 aa9.65□□□□□ -0.86
GTF3C3-207ENST00000451088 GPKOWQ92917 476 aaPredicted RBP eCLIP9.65□□□□□ -0.86
GTF3C3-207ENST00000451088 AXIN1O15169 862 aa9.64□□□□□ -0.87
GTF3C3-207ENST00000451088 SH3BP5LQ7L8J4 393 aa9.64□□□□□ -0.87
GTF3C3-207ENST00000451088 BPHLQ86WA6 291 aaPredicted RBP9.64□□□□□ -0.87
GTF3C3-207ENST00000451088 TLL2Q9Y6L7 1015 aa9.64□□□□□ -0.87
GTF3C3-207ENST00000451088 FAM174AQ8TBP5 190 aa9.63□□□□□ -0.87
GTF3C3-207ENST00000451088 USP17L8P0C7I0 530 aa9.62□□□□□ -0.87
GTF3C3-207ENST00000451088 TMEM259Q4ZIN3 620 aa9.62□□□□□ -0.87
GTF3C3-207ENST00000451088 ZNF787Q6DD87 383 aa9.62□□□□□ -0.87
GTF3C3-207ENST00000451088 CDK15Q96Q40 435 aa9.62□□□□□ -0.87
GTF3C3-207ENST00000451088 C1QTNF2Q9BXJ5 285 aa9.62□□□□□ -0.87
GTF3C3-207ENST00000451088 DACH1Q9UI36 760 aa9.62□□□□□ -0.87
GTF3C3-207ENST00000451088 NR6A1Q15406 480 aa9.61□□□□□ -0.87
GTF3C3-207ENST00000451088 HMX1Q9NP08 348 aaPredicted RBP9.61□□□□□ -0.87
GTF3C3-207ENST00000451088 FKBPLQ9UIM3 349 aa9.61□□□□□ -0.87
GTF3C3-207ENST00000451088 WASF2Q9Y6W5 498 aa9.61□□□□□ -0.87
GTF3C3-207ENST00000451088 ZC3H4Q9UPT8 1303 aaKnown RBP9.6□□□□□ -0.87
GTF3C3-207ENST00000451088 AGERQ15109 404 aa9.6□□□□□ -0.87
GTF3C3-207ENST00000451088 POTECB2RU33 542 aa9.59□□□□□ -0.87
GTF3C3-207ENST00000451088 PDXDC2PQ6P474 469 aa9.59□□□□□ -0.87
GTF3C3-207ENST00000451088 EPS8L1Q8TE68 723 aa9.59□□□□□ -0.87
GTF3C3-207ENST00000451088 ADH1CP00326 375 aa9.58□□□□□ -0.88
GTF3C3-207ENST00000451088 TRMT44Q8IYL2 757 aaKnown RBP9.58□□□□□ -0.88
GTF3C3-207ENST00000451088 GRM5P41594 1212 aa9.56□□□□□ -0.88
GTF3C3-207ENST00000451088 NNTQ13423 1086 aa9.56□□□□□ -0.88
GTF3C3-207ENST00000451088 TRIM34Q9BYJ4 488 aa9.56□□□□□ -0.88
GTF3C3-207ENST00000451088 MAP4K5Q9Y4K4 846 aa9.56□□□□□ -0.88
GTF3C3-207ENST00000451088 OCSTAMPQ9BR26 566 aa9.55□□□□□ -0.88
GTF3C3-207ENST00000451088 ATP13A2Q9NQ11 1180 aa9.55□□□□□ -0.88
GTF3C3-207ENST00000451088 MAGEB6P1A0A0J9YX57 407 aa9.54□□□□□ -0.88
GTF3C3-207ENST00000451088 NR5A1Q13285 461 aa9.54□□□□□ -0.88
GTF3C3-207ENST00000451088 ARID5BQ14865 1188 aa9.54□□□□□ -0.88
GTF3C3-207ENST00000451088 ERFEQ4G0M1 354 aa9.54□□□□□ -0.88
GTF3C3-207ENST00000451088 GJD4Q96KN9 370 aaPredicted RBP9.54□□□□□ -0.88
GTF3C3-207ENST00000451088 ARHGAP9Q9BRR9 750 aa9.54□□□□□ -0.88
GTF3C3-207ENST00000451088 KLF16Q9BXK1 252 aaPredicted RBP9.54□□□□□ -0.88
GTF3C3-207ENST00000451088 GMPR2Q9P2T1 348 aaKnown RBP9.54□□□□□ -0.88
GTF3C3-207ENST00000451088 GPSM3Q9Y4H4 160 aa9.54□□□□□ -0.88
GTF3C3-207ENST00000451088 SOCS7O14512 581 aa9.53□□□□□ -0.88
GTF3C3-207ENST00000451088 BANK1Q8NDB2 785 aa9.53□□□□□ -0.88
GTF3C3-207ENST00000451088 CAPN5O15484 640 aaPredicted RBP9.52□□□□□ -0.89
GTF3C3-207ENST00000451088 PTK2Q05397 1052 aa9.52□□□□□ -0.89
GTF3C3-207ENST00000451088 PNMA1Q8ND90 353 aa9.52□□□□□ -0.89
GTF3C3-207ENST00000451088 CARD14Q9BXL6 1004 aa9.52□□□□□ -0.89
GTF3C3-207ENST00000451088 NR3C2P08235 984 aa9.51□□□□□ -0.89
GTF3C3-207ENST00000451088 TIMP2P16035 220 aa9.51□□□□□ -0.89
GTF3C3-207ENST00000451088 VASH1Q7L8A9 365 aaPredicted RBP9.5□□□□□ -0.89
GTF3C3-207ENST00000451088 WDR4P57081 412 aaKnown RBP9.49□□□□□ -0.89
GTF3C3-207ENST00000451088 ZBTB33Q86T24 672 aa9.49□□□□□ -0.89
GTF3C3-207ENST00000451088 SENP2Q9HC62 589 aa9.49□□□□□ -0.89
GTF3C3-207ENST00000451088 C11orf95C9JLR9 678 aaPredicted RBP9.48□□□□□ -0.89
GTF3C3-207ENST00000451088 FSHRP23945 695 aa9.48□□□□□ -0.89
GTF3C3-207ENST00000451088 TRIM46Q7Z4K8 759 aa9.48□□□□□ -0.89
GTF3C3-207ENST00000451088 MTMR14Q8NCE2 650 aa9.48□□□□□ -0.89
GTF3C3-207ENST00000451088 ADAM32Q8TC27 787 aa9.48□□□□□ -0.89
GTF3C3-207ENST00000451088 TRIM47Q96LD4 638 aa9.48□□□□□ -0.89
GTF3C3-207ENST00000451088 CDV3Q9UKY7 258 aaKnown RBP9.48□□□□□ -0.89
GTF3C3-207ENST00000451088 ZNF775Q96BV0 537 aaPredicted RBP9.47□□□□□ -0.89
GTF3C3-207ENST00000451088 SLC10A4Q96EP9 437 aa9.47□□□□□ -0.89
GTF3C3-207ENST00000451088 ZIC2O95409 532 aaPredicted RBP9.46□□□□□ -0.9
GTF3C3-207ENST00000451088 BMP1P13497 986 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms