RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 NUDT16Q96DE0 195 aaKnown RBP14.41□□□□□ -0.1
LINC01238-204ENST00000451070 TOPAZ1Q8N9V7 1692 aa14.41□□□□□ -0.1
LINC01238-204ENST00000451070 NBPF1Q3BBV0 1214 aa14.4□□□□□ -0.1
LINC01238-204ENST00000451070 SRCAPQ6ZRS2 3230 aa14.4□□□□□ -0.1
LINC01238-204ENST00000451070 CDK19Q9BWU1 502 aa14.39□□□□□ -0.11
LINC01238-204ENST00000451070 BTG4Q9NY30 223 aa14.39□□□□□ -0.11
LINC01238-204ENST00000451070 CCDC9Q9Y3X0 531 aaKnown RBP14.39□□□□□ -0.11
LINC01238-204ENST00000451070 BLMP54132 1417 aaPredicted RBP14.39□□□□□ -0.11
LINC01238-204ENST00000451070 PAK3O75914 559 aaPredicted RBP14.38□□□□□ -0.11
LINC01238-204ENST00000451070 PHRF1Q9P1Y6 1649 aaKnown RBP14.37□□□□□ -0.11
LINC01238-204ENST00000451070 POLR3AO14802 1390 aaPredicted RBP14.37□□□□□ -0.11
LINC01238-204ENST00000451070 FAM98CQ17RN3 349 aaKnown RBP14.35□□□□□ -0.11
LINC01238-204ENST00000451070 KRT27Q7Z3Y8 459 aa14.35□□□□□ -0.11
LINC01238-204ENST00000451070 ZRANB1Q9UGI0 708 aa14.35□□□□□ -0.11
LINC01238-204ENST00000451070 CCDC61Q9Y6R9 512 aa14.35□□□□□ -0.11
LINC01238-204ENST00000451070 ACEP12821 1306 aa14.35□□□□□ -0.11
LINC01238-204ENST00000451070 PLEKHG3A1L390 1219 aa14.34□□□□□ -0.11
LINC01238-204ENST00000451070 NBPF8Q3BBV2 869 aa14.34□□□□□ -0.11
LINC01238-204ENST00000451070 DEFB132Q7Z7B7 95 aa14.34□□□□□ -0.11
LINC01238-204ENST00000451070 PRDM11Q9NQV5 511 aa14.34□□□□□ -0.11
LINC01238-204ENST00000451070 SPATA31A5Q5VU36 1347 aa14.34□□□□□ -0.11
LINC01238-204ENST00000451070 SPATA31A7Q8IWB4 1347 aa14.34□□□□□ -0.11
LINC01238-204ENST00000451070 KIAA0232Q92628 1395 aa14.34□□□□□ -0.11
LINC01238-204ENST00000451070 THSD7AQ9UPZ6 1657 aa14.33□□□□□ -0.11
LINC01238-204ENST00000451070 NUTM2GQ5VZR2 741 aa14.33□□□□□ -0.12
LINC01238-204ENST00000451070 QRICH2Q9H0J4 1663 aa14.33□□□□□ -0.12
LINC01238-204ENST00000451070 CENPJQ9HC77 1338 aaPredicted RBP14.32□□□□□ -0.12
LINC01238-204ENST00000451070 NRKQ7Z2Y5 1582 aa14.31□□□□□ -0.12
LINC01238-204ENST00000451070 A0A0G2JS52 829 aa14.31□□□□□ -0.12
LINC01238-204ENST00000451070 MYT1Q01538 1121 aa14.31□□□□□ -0.12
LINC01238-204ENST00000451070 CHRNA2Q15822 529 aa14.31□□□□□ -0.12
LINC01238-204ENST00000451070 L3MBTL2Q969R5 705 aa14.31□□□□□ -0.12
LINC01238-204ENST00000451070 TRPM1Q7Z4N2 1603 aa14.3□□□□□ -0.12
LINC01238-204ENST00000451070 ZC3H6P61129 1189 aaKnown RBP14.3□□□□□ -0.12
LINC01238-204ENST00000451070 PPIP5K1Q6PFW1 1433 aa14.3□□□□□ -0.12
LINC01238-204ENST00000451070 SRPK2P78362 688 aaKnown RBP14.29□□□□□ -0.12
LINC01238-204ENST00000451070 SF3B2Q13435 895 aaKnown RBP14.29□□□□□ -0.12
LINC01238-204ENST00000451070 SIN3AQ96ST3 1273 aa14.29□□□□□ -0.12
LINC01238-204ENST00000451070 CABP2Q9NPB3 220 aa14.29□□□□□ -0.12
LINC01238-204ENST00000451070 USP19O94966 1318 aa14.29□□□□□ -0.12
LINC01238-204ENST00000451070 SPATA31A1Q5TZJ5 1347 aa14.29□□□□□ -0.12
LINC01238-204ENST00000451070 FAM182BQ5T319 152 aa14.28□□□□□ -0.12
LINC01238-204ENST00000451070 LMO7Q8WWI1 1683 aa14.28□□□□□ -0.12
LINC01238-204ENST00000451070 RGPD1P0DJD0 1748 aa14.27□□□□□ -0.12
LINC01238-204ENST00000451070 CAMTA1Q9Y6Y1 1673 aa14.27□□□□□ -0.12
LINC01238-204ENST00000451070 ABTB2Q8N961 1025 aa14.27□□□□□ -0.13
LINC01238-204ENST00000451070 TNS1Q9HBL0 1735 aaKnown RBP14.27□□□□□ -0.13
LINC01238-204ENST00000451070 SSH2Q76I76 1423 aa14.26□□□□□ -0.13
LINC01238-204ENST00000451070 CPDO75976 1380 aa14.26□□□□□ -0.13
LINC01238-204ENST00000451070 STRN4Q9NRL3 753 aa14.26□□□□□ -0.13
LINC01238-204ENST00000451070 CABP1Q9NZU7 370 aa14.25□□□□□ -0.13
LINC01238-204ENST00000451070 USP6P35125 1406 aa14.24□□□□□ -0.13
LINC01238-204ENST00000451070 BRD4O60885 1362 aaPredicted RBP14.24□□□□□ -0.13
LINC01238-204ENST00000451070 GCP02774 474 aa14.24□□□□□ -0.13
LINC01238-204ENST00000451070 BAG6P46379 1132 aa14.24□□□□□ -0.13
LINC01238-204ENST00000451070 NEUROD1Q13562 356 aa14.23□□□□□ -0.13
LINC01238-204ENST00000451070 LARP1Q6PKG0 1096 aaKnown RBP14.23□□□□□ -0.13
LINC01238-204ENST00000451070 NLRP13Q86W25 1043 aa14.23□□□□□ -0.13
LINC01238-204ENST00000451070 PIK3C2AO00443 1686 aa14.23□□□□□ -0.13
LINC01238-204ENST00000451070 DISP2A7MBM2 1401 aa14.23□□□□□ -0.13
LINC01238-204ENST00000451070 EN1Q05925 392 aaPredicted RBP14.22□□□□□ -0.13
LINC01238-204ENST00000451070 BARGINQ6ZT62 677 aa14.22□□□□□ -0.13
LINC01238-204ENST00000451070 USP35Q9P2H5 1018 aa14.22□□□□□ -0.13
LINC01238-204ENST00000451070 ROCK2O75116 1388 aaKnown RBP14.22□□□□□ -0.13
LINC01238-204ENST00000451070 SLIT3O75094 1523 aa14.21□□□□□ -0.13
LINC01238-204ENST00000451070 COL5A2P05997 1499 aaPredicted RBP14.21□□□□□ -0.13
LINC01238-204ENST00000451070 EVA1CP58658 441 aa14.21□□□□□ -0.13
LINC01238-204ENST00000451070 AKAP12Q02952 1782 aa14.21□□□□□ -0.13
LINC01238-204ENST00000451070 EVC2Q86UK5 1308 aa14.2□□□□□ -0.14
LINC01238-204ENST00000451070 LRP5O75197 1615 aa14.2□□□□□ -0.14
LINC01238-204ENST00000451070 COL18A1P39060 1754 aa14.19□□□□□ -0.14
LINC01238-204ENST00000451070 PARP4Q9UKK3 1724 aaKnown RBP14.19□□□□□ -0.14
LINC01238-204ENST00000451070 NLRP6P59044 892 aa14.19□□□□□ -0.14
LINC01238-204ENST00000451070 FAM196AQ6ZSG2 479 aa14.19□□□□□ -0.14
LINC01238-204ENST00000451070 TCP11L2Q8N4U5 519 aa14.19□□□□□ -0.14
LINC01238-204ENST00000451070 PSDA5PKW4 1024 aaPredicted RBP14.18□□□□□ -0.14
LINC01238-204ENST00000451070 TRIM37O94972 964 aa14.18□□□□□ -0.14
LINC01238-204ENST00000451070 EZH2Q15910 746 aaKnown RBP14.17□□□□□ -0.14
LINC01238-204ENST00000451070 AATKQ6ZMQ8 1374 aa14.17□□□□□ -0.14
LINC01238-204ENST00000451070 TTC21BQ7Z4L5 1316 aa14.16□□□□□ -0.14
LINC01238-204ENST00000451070 CRB1P82279 1406 aa14.16□□□□□ -0.14
LINC01238-204ENST00000451070 PDE3BQ13370 1112 aa14.16□□□□□ -0.14
LINC01238-204ENST00000451070 CAMKK2Q96RR4 588 aa14.16□□□□□ -0.14
LINC01238-204ENST00000451070 THRAP3Q9Y2W1 955 aaKnown RBP14.16□□□□□ -0.14
LINC01238-204ENST00000451070 RGPD5Q99666 1765 aa14.16□□□□□ -0.14
LINC01238-204ENST00000451070 CPSF1Q10570 1443 aaKnown RBP14.15□□□□□ -0.14
LINC01238-204ENST00000451070 RREB1Q92766 1687 aa14.15□□□□□ -0.14
LINC01238-204ENST00000451070 ZBTB7CA1YPR0 619 aa14.15□□□□□ -0.14
LINC01238-204ENST00000451070 ZNF692Q9BU19 519 aaPredicted RBP14.15□□□□□ -0.14
LINC01238-204ENST00000451070 MON2Q7Z3U7 1717 aa14.15□□□□□ -0.14
LINC01238-204ENST00000451070 SBNO2Q9Y2G9 1366 aa14.14□□□□□ -0.15
LINC01238-204ENST00000451070 WNK3Q9BYP7 1800 aa14.14□□□□□ -0.15
LINC01238-204ENST00000451070 AXIN2Q9Y2T1 843 aa14.14□□□□□ -0.15
LINC01238-204ENST00000451070 PEAK1Q9H792 1746 aa14.14□□□□□ -0.15
LINC01238-204ENST00000451070 LRRC37A3O60309 1634 aa14.14□□□□□ -0.15
LINC01238-204ENST00000451070 APBA3O96018 575 aa14.13□□□□□ -0.15
LINC01238-204ENST00000451070 R3HDM1Q15032 1099 aaKnown RBP14.13□□□□□ -0.15
LINC01238-204ENST00000451070 NFAT5O94916 1531 aa14.13□□□□□ -0.15
LINC01238-204ENST00000451070 SBF2Q86WG5 1849 aa14.13□□□□□ -0.15
LINC01238-204ENST00000451070 NUP188Q5SRE5 1749 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms