RNA–Protein interactions for RNA: ENST00000451036.5

RFTN1-206, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 4

Gene RFTN1, Length 1,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-206ENST00000451036 CABP2Q9NPB3 220 aa22.92■■□□□ 1.26
RFTN1-206ENST00000451036 PLCH1Q4KWH8 1693 aa22.92■■□□□ 1.26
RFTN1-206ENST00000451036 RALGAPBQ86X10 1494 aa22.92■■□□□ 1.26
RFTN1-206ENST00000451036 POLR3AO14802 1390 aaPredicted RBP22.91■■□□□ 1.26
RFTN1-206ENST00000451036 ROCK2O75116 1388 aaKnown RBP22.91■■□□□ 1.26
RFTN1-206ENST00000451036 SRPK2P78362 688 aaKnown RBP22.91■■□□□ 1.26
RFTN1-206ENST00000451036 GLI3P10071 1580 aa22.91■■□□□ 1.26
RFTN1-206ENST00000451036 PLEKHG3A1L390 1219 aa22.9■■□□□ 1.26
RFTN1-206ENST00000451036 CRYBG1Q9Y4K1 1723 aa22.9■■□□□ 1.26
RFTN1-206ENST00000451036 NWD2Q9ULI1 1742 aa22.88■■□□□ 1.25
RFTN1-206ENST00000451036 NUTM2GQ5VZR2 741 aa22.87■■□□□ 1.25
RFTN1-206ENST00000451036 PPIP5K1Q6PFW1 1433 aa22.87■■□□□ 1.25
RFTN1-206ENST00000451036 VPS72Q15906 364 aa22.86■■□□□ 1.25
RFTN1-206ENST00000451036 ATAD2Q6PL18 1390 aa22.86■■□□□ 1.25
RFTN1-206ENST00000451036 BTG4Q9NY30 223 aa22.84■■□□□ 1.25
RFTN1-206ENST00000451036 NRAPQ86VF7 1730 aa22.84■■□□□ 1.25
RFTN1-206ENST00000451036 EP400Q96L91 3159 aa22.83■■□□□ 1.25
RFTN1-206ENST00000451036 CCDC9Q9Y3X0 531 aaKnown RBP22.83■■□□□ 1.25
RFTN1-206ENST00000451036 COL14A1Q05707 1796 aaKnown RBP22.82■■□□□ 1.24
RFTN1-206ENST00000451036 TONSLQ96HA7 1378 aa22.82■■□□□ 1.24
RFTN1-206ENST00000451036 CABP1Q9NZU7 370 aa22.81■■□□□ 1.24
RFTN1-206ENST00000451036 PHRF1Q9P1Y6 1649 aaKnown RBP22.81■■□□□ 1.24
RFTN1-206ENST00000451036 PRDM11Q9NQV5 511 aa22.8■■□□□ 1.24
RFTN1-206ENST00000451036 EVC2Q86UK5 1308 aa22.8■■□□□ 1.24
RFTN1-206ENST00000451036 KIAA0232Q92628 1395 aa22.79■■□□□ 1.24
RFTN1-206ENST00000451036 ABTB2Q8N961 1025 aa22.79■■□□□ 1.24
RFTN1-206ENST00000451036 SEPT12Q8IYM1 358 aa22.78■■□□□ 1.24
RFTN1-206ENST00000451036 BRWD3Q6RI45 1802 aa22.78■■□□□ 1.24
RFTN1-206ENST00000451036 ZC3H6P61129 1189 aaKnown RBP22.77■■□□□ 1.24
RFTN1-206ENST00000451036 CHRNA2Q15822 529 aa22.77■■□□□ 1.24
RFTN1-206ENST00000451036 CARD11Q9BXL7 1154 aa22.76■■□□□ 1.23
RFTN1-206ENST00000451036 USP6P35125 1406 aa22.75■■□□□ 1.23
RFTN1-206ENST00000451036 ONECUT3O60422 494 aaPredicted RBP22.75■■□□□ 1.23
RFTN1-206ENST00000451036 NRKQ7Z2Y5 1582 aa22.75■■□□□ 1.23
RFTN1-206ENST00000451036 USP19O94966 1318 aa22.74■■□□□ 1.23
RFTN1-206ENST00000451036 FAM98CQ17RN3 349 aaKnown RBP22.73■■□□□ 1.23
RFTN1-206ENST00000451036 SPATA31A5Q5VU36 1347 aa22.71■■□□□ 1.23
RFTN1-206ENST00000451036 SPATA31A7Q8IWB4 1347 aa22.71■■□□□ 1.23
RFTN1-206ENST00000451036 BRD4O60885 1362 aaPredicted RBP22.71■■□□□ 1.23
RFTN1-206ENST00000451036 SSH2Q76I76 1423 aa22.71■■□□□ 1.23
RFTN1-206ENST00000451036 A0A0G2JS52 829 aa22.7■■□□□ 1.22
RFTN1-206ENST00000451036 MYT1Q01538 1121 aa22.7■■□□□ 1.22
RFTN1-206ENST00000451036 NLRP13Q86W25 1043 aa22.7■■□□□ 1.22
RFTN1-206ENST00000451036 STRN4Q9NRL3 753 aa22.7■■□□□ 1.22
RFTN1-206ENST00000451036 SBNO2Q9Y2G9 1366 aa22.7■■□□□ 1.22
RFTN1-206ENST00000451036 GCP02774 474 aa22.68■■□□□ 1.22
RFTN1-206ENST00000451036 KRT27Q7Z3Y8 459 aa22.68■■□□□ 1.22
RFTN1-206ENST00000451036 CPDO75976 1380 aa22.67■■□□□ 1.22
RFTN1-206ENST00000451036 NLRP6P59044 892 aa22.67■■□□□ 1.22
RFTN1-206ENST00000451036 PIK3C2AO00443 1686 aa22.67■■□□□ 1.22
RFTN1-206ENST00000451036 AKAP12Q02952 1782 aa22.66■■□□□ 1.22
RFTN1-206ENST00000451036 CAMTA1Q9Y6Y1 1673 aa22.66■■□□□ 1.22
RFTN1-206ENST00000451036 LMO7Q8WWI1 1683 aa22.65■■□□□ 1.22
RFTN1-206ENST00000451036 SPATA31A1Q5TZJ5 1347 aa22.65■■□□□ 1.22
RFTN1-206ENST00000451036 CCDC125Q86Z20 511 aa22.65■■□□□ 1.22
RFTN1-206ENST00000451036 CPSF1Q10570 1443 aaKnown RBP22.65■■□□□ 1.22
RFTN1-206ENST00000451036 TTC21BQ7Z4L5 1316 aa22.64■■□□□ 1.22
RFTN1-206ENST00000451036 THSD7AQ9UPZ6 1657 aa22.64■■□□□ 1.21
RFTN1-206ENST00000451036 SLIT3O75094 1523 aa22.63■■□□□ 1.21
RFTN1-206ENST00000451036 ZNF692Q9BU19 519 aaPredicted RBP22.63■■□□□ 1.21
RFTN1-206ENST00000451036 BLMP54132 1417 aaPredicted RBP22.63■■□□□ 1.21
RFTN1-206ENST00000451036 EVA1CP58658 441 aa22.62■■□□□ 1.21
RFTN1-206ENST00000451036 USP35Q9P2H5 1018 aa22.62■■□□□ 1.21
RFTN1-206ENST00000451036 ZBTB7CA1YPR0 619 aa22.61■■□□□ 1.21
RFTN1-206ENST00000451036 FAM182BQ5T319 152 aa22.61■■□□□ 1.21
RFTN1-206ENST00000451036 LARP1Q6PKG0 1096 aaKnown RBP22.61■■□□□ 1.21
RFTN1-206ENST00000451036 KTN1Q86UP2 1357 aaKnown RBP22.61■■□□□ 1.21
RFTN1-206ENST00000451036 CD163L1Q9NR16 1453 aa22.6■■□□□ 1.21
RFTN1-206ENST00000451036 DEFB132Q7Z7B7 95 aa22.59■■□□□ 1.21
RFTN1-206ENST00000451036 MON2Q7Z3U7 1717 aa22.58■■□□□ 1.21
RFTN1-206ENST00000451036 ST20-MTHFSA0A0A6YYL1 179 aa22.58■■□□□ 1.21
RFTN1-206ENST00000451036 TMC1Q8TDI8 760 aa22.58■■□□□ 1.21
RFTN1-206ENST00000451036 TESK2Q96S53 571 aa22.58■■□□□ 1.21
RFTN1-206ENST00000451036 COL5A2P05997 1499 aaPredicted RBP22.58■■□□□ 1.2
RFTN1-206ENST00000451036 TTC21AQ8NDW8 1320 aa22.57■■□□□ 1.2
RFTN1-206ENST00000451036 SLC12A5Q9H2X9 1139 aa22.57■■□□□ 1.2
RFTN1-206ENST00000451036 SOX12O15370 315 aa22.56■■□□□ 1.2
RFTN1-206ENST00000451036 PCGF6Q9BYE7 350 aa22.56■■□□□ 1.2
RFTN1-206ENST00000451036 ZRANB1Q9UGI0 708 aa22.56■■□□□ 1.2
RFTN1-206ENST00000451036 AATKQ6ZMQ8 1374 aa22.55■■□□□ 1.2
RFTN1-206ENST00000451036 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.55■■□□□ 1.2
RFTN1-206ENST00000451036 COL18A1P39060 1754 aa22.54■■□□□ 1.2
RFTN1-206ENST00000451036 SF3B2Q13435 895 aaKnown RBP22.54■■□□□ 1.2
RFTN1-206ENST00000451036 BARGINQ6ZT62 677 aa22.54■■□□□ 1.2
RFTN1-206ENST00000451036 TCP11L2Q8N4U5 519 aa22.54■■□□□ 1.2
RFTN1-206ENST00000451036 AXIN2Q9Y2T1 843 aa22.53■■□□□ 1.2
RFTN1-206ENST00000451036 ARHGEF25Q86VW2 580 aa22.52■■□□□ 1.2
RFTN1-206ENST00000451036 NME9Q86XW9 330 aa22.52■■□□□ 1.2
RFTN1-206ENST00000451036 NFAT5O94916 1531 aa22.52■■□□□ 1.19
RFTN1-206ENST00000451036 A0A1W2PP64 1363 aa22.51■■□□□ 1.19
RFTN1-206ENST00000451036 KCNH5Q8NCM2 988 aa22.51■■□□□ 1.19
RFTN1-206ENST00000451036 CRB1P82279 1406 aa22.5■■□□□ 1.19
RFTN1-206ENST00000451036 HDGFL2Q7Z4V5 671 aaPredicted RBP22.5■■□□□ 1.19
RFTN1-206ENST00000451036 PUS7Q96PZ0 661 aaKnown RBP22.5■■□□□ 1.19
RFTN1-206ENST00000451036 USP47Q96K76 1375 aa22.5■■□□□ 1.19
RFTN1-206ENST00000451036 USP31Q70CQ4 1352 aa22.49■■□□□ 1.19
RFTN1-206ENST00000451036 SRCAPQ6ZRS2 3230 aa22.48■■□□□ 1.19
RFTN1-206ENST00000451036 THRAP3Q9Y2W1 955 aaKnown RBP22.48■■□□□ 1.19
RFTN1-206ENST00000451036 EDC4Q6P2E9 1401 aaKnown RBP22.48■■□□□ 1.19
RFTN1-206ENST00000451036 TERF2IPQ9NYB0 399 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms