RNA–Protein interactions for RNA: ENST00000450650.5

CAPN13-202, Transcript of calpain 13, humanhuman

TSL 2

Gene CAPN13, Length 2,328 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-202ENST00000450650 BRD4O60885 1362 aaPredicted RBP12.2□□□□□ -0.46
CAPN13-202ENST00000450650 IRF5Q13568 498 aa12.2□□□□□ -0.46
CAPN13-202ENST00000450650 CENPJQ9HC77 1338 aaPredicted RBP12.2□□□□□ -0.46
CAPN13-202ENST00000450650 CALD1Q05682 793 aaKnown RBP12.2□□□□□ -0.46
CAPN13-202ENST00000450650 TMC1Q8TDI8 760 aa12.2□□□□□ -0.46
CAPN13-202ENST00000450650 TMEM132EQ6IEE7 984 aa12.19□□□□□ -0.46
CAPN13-202ENST00000450650 MYOM1P52179 1685 aa12.19□□□□□ -0.46
CAPN13-202ENST00000450650 TRAK1Q9UPV9 953 aa12.19□□□□□ -0.46
CAPN13-202ENST00000450650 RETREG2Q8NC44 543 aa12.18□□□□□ -0.46
CAPN13-202ENST00000450650 STAG3Q9UJ98 1225 aa12.18□□□□□ -0.46
CAPN13-202ENST00000450650 NLRP13Q86W25 1043 aa12.17□□□□□ -0.46
CAPN13-202ENST00000450650 ZMYND10O75800 440 aa12.17□□□□□ -0.46
CAPN13-202ENST00000450650 CHRM1P11229 460 aaPredicted RBP12.17□□□□□ -0.46
CAPN13-202ENST00000450650 CANXP27824 592 aaKnown RBP12.17□□□□□ -0.46
CAPN13-202ENST00000450650 TEX2Q8IWB9 1127 aa12.17□□□□□ -0.46
CAPN13-202ENST00000450650 PNISRQ8TF01 805 aaKnown RBP12.17□□□□□ -0.46
CAPN13-202ENST00000450650 KDM4CQ9H3R0 1056 aa12.17□□□□□ -0.46
CAPN13-202ENST00000450650 KNSTRNQ9Y448 316 aa12.17□□□□□ -0.46
CAPN13-202ENST00000450650 ZMYM3Q14202 1370 aa12.17□□□□□ -0.46
CAPN13-202ENST00000450650 QRICH2Q9H0J4 1663 aa12.17□□□□□ -0.46
CAPN13-202ENST00000450650 ZBED9Q6R2W3 1325 aa12.16□□□□□ -0.46
CAPN13-202ENST00000450650 CC2D1BQ5T0F9 858 aaKnown RBP12.16□□□□□ -0.46
CAPN13-202ENST00000450650 ZNF592Q92610 1267 aa12.16□□□□□ -0.46
CAPN13-202ENST00000450650 FBXW7Q969H0 707 aa12.16□□□□□ -0.46
CAPN13-202ENST00000450650 SEMA3EO15041 775 aa12.15□□□□□ -0.46
CAPN13-202ENST00000450650 A2ML1A8K2U0 1454 aa12.15□□□□□ -0.46
CAPN13-202ENST00000450650 ARHGEF28Q8N1W1 1705 aaKnown RBP12.15□□□□□ -0.46
CAPN13-202ENST00000450650 CERS3Q8IU89 383 aa12.14□□□□□ -0.47
CAPN13-202ENST00000450650 ASXL1Q8IXJ9 1541 aa12.14□□□□□ -0.47
CAPN13-202ENST00000450650 RGS3P49796 1198 aa12.14□□□□□ -0.47
CAPN13-202ENST00000450650 FTSJ3Q8IY81 847 aaKnown RBP12.14□□□□□ -0.47
CAPN13-202ENST00000450650 LRPPRCP42704 1394 aaKnown RBP12.13□□□□□ -0.47
CAPN13-202ENST00000450650 NEFMP07197 916 aa12.12□□□□□ -0.47
CAPN13-202ENST00000450650 HSP90AA1P07900 732 aaKnown RBP12.12□□□□□ -0.47
CAPN13-202ENST00000450650 TMED8Q6PL24 325 aaPredicted RBP12.12□□□□□ -0.47
CAPN13-202ENST00000450650 NPC1L1Q9UHC9 1359 aa12.12□□□□□ -0.47
CAPN13-202ENST00000450650 TRAK2O60296 914 aa12.12□□□□□ -0.47
CAPN13-202ENST00000450650 SECISBP2LQ93073 1101 aaKnown RBP12.12□□□□□ -0.47
CAPN13-202ENST00000450650 RIMS2Q9UQ26 1411 aa12.12□□□□□ -0.47
CAPN13-202ENST00000450650 ALKQ9UM73 1620 aa12.11□□□□□ -0.47
CAPN13-202ENST00000450650 TNRQ92752 1358 aa12.1□□□□□ -0.47
CAPN13-202ENST00000450650 EVC2Q86UK5 1308 aa12.1□□□□□ -0.47
CAPN13-202ENST00000450650 YTHDC2Q9H6S0 1430 aaKnown RBP12.1□□□□□ -0.47
CAPN13-202ENST00000450650 CADPS2Q86UW7 1296 aa12.1□□□□□ -0.47
CAPN13-202ENST00000450650 STK26Q9P289 416 aa12.09□□□□□ -0.47
CAPN13-202ENST00000450650 FER1L4A9Z1Z3 1794 aa12.09□□□□□ -0.47
CAPN13-202ENST00000450650 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.09□□□□□ -0.47
CAPN13-202ENST00000450650 TULP4Q9NRJ4 1543 aa12.09□□□□□ -0.47
CAPN13-202ENST00000450650 PTPRMP28827 1452 aa12.08□□□□□ -0.48
CAPN13-202ENST00000450650 PPP2R1AP30153 589 aa12.07□□□□□ -0.48
CAPN13-202ENST00000450650 CEBPAP49715 358 aaPredicted RBP12.07□□□□□ -0.48
CAPN13-202ENST00000450650 CARD14Q9BXL6 1004 aa12.07□□□□□ -0.48
CAPN13-202ENST00000450650 POLA2Q14181 598 aa12.06□□□□□ -0.48
CAPN13-202ENST00000450650 ZNF219Q9P2Y4 722 aaPredicted RBP12.06□□□□□ -0.48
CAPN13-202ENST00000450650 INSRP06213 1382 aa12.06□□□□□ -0.48
CAPN13-202ENST00000450650 HDGFP51858 240 aaKnown RBP12.06□□□□□ -0.48
CAPN13-202ENST00000450650 SAFB2Q14151 953 aaKnown RBP eCLIP12.06□□□□□ -0.48
CAPN13-202ENST00000450650 SETD1AO15047 1707 aaKnown RBP12.05□□□□□ -0.48
CAPN13-202ENST00000450650 PRAM1Q96QH2 718 aa12.05□□□□□ -0.48
CAPN13-202ENST00000450650 FAM117AQ9C073 453 aa12.05□□□□□ -0.48
CAPN13-202ENST00000450650 POGKQ9P215 609 aa12.05□□□□□ -0.48
CAPN13-202ENST00000450650 UBR1Q8IWV7 1749 aa12.05□□□□□ -0.48
CAPN13-202ENST00000450650 ZNF526Q8TF50 670 aaPredicted RBP12.05□□□□□ -0.48
CAPN13-202ENST00000450650 SLC12A5Q9H2X9 1139 aa12.05□□□□□ -0.48
CAPN13-202ENST00000450650 C3P01024 1663 aa12.05□□□□□ -0.48
CAPN13-202ENST00000450650 NSD3Q9BZ95 1437 aa12.05□□□□□ -0.48
CAPN13-202ENST00000450650 NRXN3Q9Y4C0 1643 aa12.04□□□□□ -0.48
CAPN13-202ENST00000450650 NLRP1Q9C000 1473 aa12.04□□□□□ -0.48
CAPN13-202ENST00000450650 DLC1Q96QB1 1528 aa12.04□□□□□ -0.48
CAPN13-202ENST00000450650 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.04□□□□□ -0.48
CAPN13-202ENST00000450650 TMEM2Q9UHN6 1383 aa12.04□□□□□ -0.48
CAPN13-202ENST00000450650 IPO9Q96P70 1041 aaKnown RBP12.03□□□□□ -0.48
CAPN13-202ENST00000450650 CABP2Q9NPB3 220 aa12.03□□□□□ -0.48
CAPN13-202ENST00000450650 NINLQ9Y2I6 1382 aa12.03□□□□□ -0.48
CAPN13-202ENST00000450650 BLMP54132 1417 aaPredicted RBP12.03□□□□□ -0.48
CAPN13-202ENST00000450650 SMG6Q86US8 1419 aaKnown RBP12.03□□□□□ -0.48
CAPN13-202ENST00000450650 ANKRD36BQ8N2N9 1353 aa12.03□□□□□ -0.48
CAPN13-202ENST00000450650 PLCD3Q8N3E9 789 aa12.03□□□□□ -0.48
CAPN13-202ENST00000450650 USP32Q8NFA0 1604 aa12.03□□□□□ -0.48
CAPN13-202ENST00000450650 MINK1Q8N4C8 1332 aaPredicted RBP12.02□□□□□ -0.49
CAPN13-202ENST00000450650 ATAD2Q6PL18 1390 aa12.02□□□□□ -0.49
CAPN13-202ENST00000450650 ABCC11Q96J66 1382 aa12.02□□□□□ -0.49
CAPN13-202ENST00000450650 SRPK2P78362 688 aaKnown RBP12.02□□□□□ -0.49
CAPN13-202ENST00000450650 KDM4AO75164 1064 aa12.01□□□□□ -0.49
CAPN13-202ENST00000450650 GSE1Q14687 1217 aa12.01□□□□□ -0.49
CAPN13-202ENST00000450650 PPP4R2Q9NY27 417 aa12.01□□□□□ -0.49
CAPN13-202ENST00000450650 RIMS1Q86UR5 1692 aaKnown RBP12.01□□□□□ -0.49
CAPN13-202ENST00000450650 CGNL1Q0VF96 1302 aa12.01□□□□□ -0.49
CAPN13-202ENST00000450650 ONECUT3O60422 494 aaPredicted RBP12□□□□□ -0.49
CAPN13-202ENST00000450650 ZBTB47Q9UFB7 747 aaPredicted RBP12□□□□□ -0.49
CAPN13-202ENST00000450650 NUDCQ9Y266 331 aa12□□□□□ -0.49
CAPN13-202ENST00000450650 ADAMTSL3P82987 1691 aa12□□□□□ -0.49
CAPN13-202ENST00000450650 SENP3-EIF4A1A0A087X0R7 540 aa11.99□□□□□ -0.49
CAPN13-202ENST00000450650 WDR43Q15061 677 aaKnown RBP eCLIP11.99□□□□□ -0.49
CAPN13-202ENST00000450650 BARGINQ6ZT62 677 aa11.99□□□□□ -0.49
CAPN13-202ENST00000450650 METP08581 1390 aa11.99□□□□□ -0.49
CAPN13-202ENST00000450650 HOXD11P31277 338 aaPredicted RBP11.99□□□□□ -0.49
CAPN13-202ENST00000450650 NSD2O96028 1365 aa11.99□□□□□ -0.49
CAPN13-202ENST00000450650 STK25O00506 426 aa11.98□□□□□ -0.49
CAPN13-202ENST00000450650 MORC1Q86VD1 984 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms