RNA–Protein interactions for RNA: ENST00000450056.6

CHFR-205, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 3,250 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-205ENST00000450056 BAG4O95429 457 aaKnown RBP17.41■□□□□ 0.38
CHFR-205ENST00000450056 ATF7IPQ6VMQ6 1270 aa17.41■□□□□ 0.38
CHFR-205ENST00000450056 SPAG9O60271 1321 aaKnown RBP17.41■□□□□ 0.38
CHFR-205ENST00000450056 SCAPERQ9BY12 1400 aa17.41■□□□□ 0.38
CHFR-205ENST00000450056 CFAP74Q9C0B2 1584 aa17.41■□□□□ 0.38
CHFR-205ENST00000450056 RIPK4P57078 832 aa17.4■□□□□ 0.38
CHFR-205ENST00000450056 RIMBP3CA6NJZ7 1639 aa17.4■□□□□ 0.38
CHFR-205ENST00000450056 RIMBP3BA6NNM3 1639 aa17.4■□□□□ 0.38
CHFR-205ENST00000450056 RIMBP3Q9UFD9 1639 aa17.4■□□□□ 0.38
CHFR-205ENST00000450056 CHD1LQ86WJ1 897 aa17.4■□□□□ 0.38
CHFR-205ENST00000450056 WDR63Q8IWG1 891 aa17.4■□□□□ 0.38
CHFR-205ENST00000450056 NGEFQ8N5V2 710 aa17.4■□□□□ 0.38
CHFR-205ENST00000450056 NPM1P06748 294 aaKnown RBP eCLIP17.39■□□□□ 0.38
CHFR-205ENST00000450056 TRPM1Q7Z4N2 1603 aa17.39■□□□□ 0.37
CHFR-205ENST00000450056 KIDINS220Q9ULH0 1771 aa17.39■□□□□ 0.37
CHFR-205ENST00000450056 SMC5Q8IY18 1101 aa17.39■□□□□ 0.37
CHFR-205ENST00000450056 AAMPQ13685 434 aa17.39■□□□□ 0.37
CHFR-205ENST00000450056 ATP10AO60312 1499 aa17.38■□□□□ 0.37
CHFR-205ENST00000450056 TMEM132EQ6IEE7 984 aa17.38■□□□□ 0.37
CHFR-205ENST00000450056 CIZ1Q9ULV3 898 aaPredicted RBP17.38■□□□□ 0.37
CHFR-205ENST00000450056 PRIM1P49642 420 aaKnown RBP17.38■□□□□ 0.37
CHFR-205ENST00000450056 VWDEQ8N2E2 1590 aa17.37■□□□□ 0.37
CHFR-205ENST00000450056 EIF2AK4Q9P2K8 1649 aaKnown RBP17.37■□□□□ 0.37
CHFR-205ENST00000450056 CD109Q6YHK3 1445 aa17.37■□□□□ 0.37
CHFR-205ENST00000450056 RBSNQ9H1K0 784 aa17.37■□□□□ 0.37
CHFR-205ENST00000450056 PKP1Q13835 747 aa17.37■□□□□ 0.37
CHFR-205ENST00000450056 TBC1D9Q6ZT07 1266 aa17.37■□□□□ 0.37
CHFR-205ENST00000450056 TSC1Q92574 1164 aa17.37■□□□□ 0.37
CHFR-205ENST00000450056 PTMSP20962 102 aa17.36■□□□□ 0.37
CHFR-205ENST00000450056 SYCE3A1L190 88 aa17.36■□□□□ 0.37
CHFR-205ENST00000450056 FAM177BA6PVY3 158 aa17.36■□□□□ 0.37
CHFR-205ENST00000450056 ZSCAN23Q3MJ62 389 aa17.36■□□□□ 0.37
CHFR-205ENST00000450056 MROH1Q8NDA8 1641 aa17.35■□□□□ 0.37
CHFR-205ENST00000450056 IPO8O15397 1037 aaKnown RBP17.35■□□□□ 0.37
CHFR-205ENST00000450056 NSD3Q9BZ95 1437 aa17.35■□□□□ 0.37
CHFR-205ENST00000450056 KLHL40Q2TBA0 621 aa17.34■□□□□ 0.37
CHFR-205ENST00000450056 JARID2Q92833 1246 aaPredicted RBP17.34■□□□□ 0.37
CHFR-205ENST00000450056 MAP3K4Q9Y6R4 1608 aa17.34■□□□□ 0.37
CHFR-205ENST00000450056 SNX21Q969T3 373 aa17.34■□□□□ 0.37
CHFR-205ENST00000450056 ZNF518AQ6AHZ1 1483 aa17.34■□□□□ 0.37
CHFR-205ENST00000450056 RBM25P49756 843 aaKnown RBP17.34■□□□□ 0.37
CHFR-205ENST00000450056 PRDM15P57071 1507 aaPredicted RBP17.34■□□□□ 0.37
CHFR-205ENST00000450056 HDAC1Q13547 482 aaPredicted RBP17.33■□□□□ 0.37
CHFR-205ENST00000450056 GGNBP2Q9H3C7 697 aa17.32■□□□□ 0.36
CHFR-205ENST00000450056 POGZQ7Z3K3 1410 aa17.32■□□□□ 0.36
CHFR-205ENST00000450056 ADGRF5Q8IZF2 1346 aa17.32■□□□□ 0.36
CHFR-205ENST00000450056 NUCB1Q02818 461 aa17.32■□□□□ 0.36
CHFR-205ENST00000450056 PPP1R9BQ96SB3 815 aa17.32■□□□□ 0.36
CHFR-205ENST00000450056 TET3O43151 1660 aa17.31■□□□□ 0.36
CHFR-205ENST00000450056 ZNF830Q96NB3 372 aaPredicted RBP17.31■□□□□ 0.36
CHFR-205ENST00000450056 GLI2P10070 1586 aa17.31■□□□□ 0.36
CHFR-205ENST00000450056 KIF3BO15066 747 aa17.31■□□□□ 0.36
CHFR-205ENST00000450056 ZGPATQ8N5A5 531 aaKnown RBP17.31■□□□□ 0.36
CHFR-205ENST00000450056 BCL11BQ9C0K0 894 aaPredicted RBP17.31■□□□□ 0.36
CHFR-205ENST00000450056 THUMPD2Q9BTF0 503 aaKnown RBP17.3■□□□□ 0.36
CHFR-205ENST00000450056 SCAF11Q99590 1463 aaKnown RBP17.3■□□□□ 0.36
CHFR-205ENST00000450056 NEO1Q92859 1461 aa17.3■□□□□ 0.36
CHFR-205ENST00000450056 CBX1P83916 185 aa17.29■□□□□ 0.36
CHFR-205ENST00000450056 KIF16BQ96L93 1317 aa17.29■□□□□ 0.36
CHFR-205ENST00000450056 ZBTB40Q9NUA8 1239 aa17.29■□□□□ 0.36
CHFR-205ENST00000450056 STK26Q9P289 416 aa17.29■□□□□ 0.36
CHFR-205ENST00000450056 MLH3Q9UHC1 1453 aa17.28■□□□□ 0.36
CHFR-205ENST00000450056 FRMPD1Q5SYB0 1578 aa17.28■□□□□ 0.36
CHFR-205ENST00000450056 TMPOP42166 694 aaKnown RBP17.28■□□□□ 0.36
CHFR-205ENST00000450056 KIF2CQ99661 725 aa17.28■□□□□ 0.36
CHFR-205ENST00000450056 HECW2Q9P2P5 1572 aa17.28■□□□□ 0.36
CHFR-205ENST00000450056 NUCB2P80303 420 aa17.27■□□□□ 0.36
CHFR-205ENST00000450056 MAP7D2Q96T17 732 aa17.27■□□□□ 0.36
CHFR-205ENST00000450056 RNF17Q9BXT8 1623 aaKnown RBP17.27■□□□□ 0.36
CHFR-205ENST00000450056 SPHKAPQ2M3C7 1700 aa17.27■□□□□ 0.36
CHFR-205ENST00000450056 BMP2KLQ5H9B9 411 aa17.27■□□□□ 0.36
CHFR-205ENST00000450056 CDC45O75419 566 aa17.27■□□□□ 0.35
CHFR-205ENST00000450056 CABP2Q9NPB3 220 aa17.27■□□□□ 0.35
CHFR-205ENST00000450056 TRPM2O94759 1503 aa17.26■□□□□ 0.35
CHFR-205ENST00000450056 PTPRTO14522 1441 aa17.26■□□□□ 0.35
CHFR-205ENST00000450056 POLR3AO14802 1390 aaPredicted RBP17.26■□□□□ 0.35
CHFR-205ENST00000450056 DDIT3P35638 169 aa17.26■□□□□ 0.35
CHFR-205ENST00000450056 IGSF3O75054 1194 aa17.26■□□□□ 0.35
CHFR-205ENST00000450056 C16orf71Q8IYS4 520 aaPredicted RBP17.26■□□□□ 0.35
CHFR-205ENST00000450056 GDPD2Q9HCC8 539 aa17.26■□□□□ 0.35
CHFR-205ENST00000450056 NOL7Q9UMY1 257 aaKnown RBP17.26■□□□□ 0.35
CHFR-205ENST00000450056 SRPK2P78362 688 aaKnown RBP17.25■□□□□ 0.35
CHFR-205ENST00000450056 C17orf53Q8N3J3 647 aaPredicted RBP17.25■□□□□ 0.35
CHFR-205ENST00000450056 ZKSCAN5Q9Y2L8 839 aa17.25■□□□□ 0.35
CHFR-205ENST00000450056 ABCA6Q8N139 1617 aa17.25■□□□□ 0.35
CHFR-205ENST00000450056 RICTORQ6R327 1708 aa17.25■□□□□ 0.35
CHFR-205ENST00000450056 CSPP1Q1MSJ5 1256 aa17.24■□□□□ 0.35
CHFR-205ENST00000450056 CYB5RLQ6IPT4 315 aa17.24■□□□□ 0.35
CHFR-205ENST00000450056 LMBRD1Q9NUN5 540 aa17.24■□□□□ 0.35
CHFR-205ENST00000450056 FBLN1P23142 703 aa17.24■□□□□ 0.35
CHFR-205ENST00000450056 CEP152O94986 1710 aa17.24■□□□□ 0.35
CHFR-205ENST00000450056 NSFL1CQ9UNZ2 370 aaKnown RBP17.23■□□□□ 0.35
CHFR-205ENST00000450056 AK9Q5TCS8 1911 aa17.23■□□□□ 0.35
CHFR-205ENST00000450056 ST18O60284 1047 aa17.23■□□□□ 0.35
CHFR-205ENST00000450056 CCDC39Q9UFE4 941 aa17.23■□□□□ 0.35
CHFR-205ENST00000450056 HMOX1P09601 288 aa17.23■□□□□ 0.35
CHFR-205ENST00000450056 DIP2BQ9P265 1576 aa17.23■□□□□ 0.35
CHFR-205ENST00000450056 LMTK2Q8IWU2 1503 aa17.23■□□□□ 0.35
CHFR-205ENST00000450056 KIAA2012Q0VF49 1180 aa17.22■□□□□ 0.35
CHFR-205ENST00000450056 PRDM4Q9UKN5 801 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms