RNA–Protein interactions for RNA: ENST00000449491.1

USP25-205, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 5

Gene USP25, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-205ENST00000449491 QPCTQ16769 361 aa9.71□□□□□ -0.86
USP25-205ENST00000449491 PRPF38BQ5VTL8 546 aaKnown RBP9.71□□□□□ -0.86
USP25-205ENST00000449491 ZNF511Q8NB15 262 aa9.71□□□□□ -0.86
USP25-205ENST00000449491 ZBTB3Q9H5J0 574 aa9.71□□□□□ -0.86
USP25-205ENST00000449491 MAP10Q9P2G4 905 aa9.7□□□□□ -0.86
USP25-205ENST00000449491 CSPP1Q1MSJ5 1256 aa9.69□□□□□ -0.86
USP25-205ENST00000449491 TRIM47Q96LD4 638 aa9.69□□□□□ -0.86
USP25-205ENST00000449491 LILRB3O75022 631 aa9.68□□□□□ -0.86
USP25-205ENST00000449491 TUSC1Q2TAM9 212 aa9.68□□□□□ -0.86
USP25-205ENST00000449491 LCE2CQ5TA81 110 aa9.68□□□□□ -0.86
USP25-205ENST00000449491 TLL2Q9Y6L7 1015 aa9.68□□□□□ -0.86
USP25-205ENST00000449491 NFX1Q12986 1120 aaKnown RBP9.67□□□□□ -0.86
USP25-205ENST00000449491 CTHP32929 405 aa9.66□□□□□ -0.86
USP25-205ENST00000449491 TRIM46Q7Z4K8 759 aa9.66□□□□□ -0.86
USP25-205ENST00000449491 FOXJ1Q92949 421 aa9.66□□□□□ -0.86
USP25-205ENST00000449491 VARSP26640 1264 aaKnown RBP9.65□□□□□ -0.86
USP25-205ENST00000449491 RTL5Q5HYW3 569 aaPredicted RBP9.65□□□□□ -0.86
USP25-205ENST00000449491 MPNDQ8N594 471 aa9.65□□□□□ -0.86
USP25-205ENST00000449491 BMP1P13497 986 aa9.64□□□□□ -0.87
USP25-205ENST00000449491 C4orf48Q5BLP8 95 aa9.64□□□□□ -0.87
USP25-205ENST00000449491 WASF2Q9Y6W5 498 aa9.64□□□□□ -0.87
USP25-205ENST00000449491 SENP2Q9HC62 589 aa9.63□□□□□ -0.87
USP25-205ENST00000449491 CAPN5O15484 640 aaPredicted RBP9.62□□□□□ -0.87
USP25-205ENST00000449491 FBXO31Q5XUX0 539 aaPredicted RBP9.62□□□□□ -0.87
USP25-205ENST00000449491 KLF16Q9BXK1 252 aaPredicted RBP9.62□□□□□ -0.87
USP25-205ENST00000449491 WFS1O76024 890 aa9.61□□□□□ -0.87
USP25-205ENST00000449491 NUTM2BA6NNL0 878 aaPredicted RBP9.6□□□□□ -0.87
USP25-205ENST00000449491 NUTM2EB1AL46 878 aaPredicted RBP9.6□□□□□ -0.87
USP25-205ENST00000449491 CLK2P49760 499 aaKnown RBP9.6□□□□□ -0.87
USP25-205ENST00000449491 TPRNQ4KMQ1 711 aa9.6□□□□□ -0.87
USP25-205ENST00000449491 NUTM2DQ5VT03 806 aaPredicted RBP9.6□□□□□ -0.87
USP25-205ENST00000449491 NUTM2AQ8IVF1 878 aaPredicted RBP9.6□□□□□ -0.87
USP25-205ENST00000449491 CDK15Q96Q40 435 aa9.6□□□□□ -0.87
USP25-205ENST00000449491 POLR3EQ9NVU0 708 aa9.6□□□□□ -0.87
USP25-205ENST00000449491 NNTQ13423 1086 aa9.59□□□□□ -0.87
USP25-205ENST00000449491 TERTO14746 1132 aaKnown RBP9.58□□□□□ -0.88
USP25-205ENST00000449491 PRKCSHP14314 528 aaPredicted RBP9.58□□□□□ -0.88
USP25-205ENST00000449491 TSC1Q92574 1164 aa9.58□□□□□ -0.88
USP25-205ENST00000449491 KIFC2Q96AC6 838 aa9.58□□□□□ -0.88
USP25-205ENST00000449491 PLEKHG3A1L390 1219 aa9.57□□□□□ -0.88
USP25-205ENST00000449491 TIMP2P16035 220 aa9.57□□□□□ -0.88
USP25-205ENST00000449491 FAM174AQ8TBP5 190 aa9.57□□□□□ -0.88
USP25-205ENST00000449491 GPBP1L1Q9HC44 474 aaPredicted RBP9.57□□□□□ -0.88
USP25-205ENST00000449491 ADH1CP00326 375 aa9.56□□□□□ -0.88
USP25-205ENST00000449491 NR3C2P08235 984 aa9.56□□□□□ -0.88
USP25-205ENST00000449491 GRM5P41594 1212 aa9.56□□□□□ -0.88
USP25-205ENST00000449491 SH3RF1Q7Z6J0 888 aa9.56□□□□□ -0.88
USP25-205ENST00000449491 CTDSPL2Q05D32 466 aa9.55□□□□□ -0.88
USP25-205ENST00000449491 ZFP42Q96MM3 310 aa9.55□□□□□ -0.88
USP25-205ENST00000449491 C1QTNF2Q9BXJ5 285 aa9.55□□□□□ -0.88
USP25-205ENST00000449491 RSPH6AQ9H0K4 717 aa9.55□□□□□ -0.88
USP25-205ENST00000449491 PROCA1Q8NCQ7 364 aaPredicted RBP9.54□□□□□ -0.88
USP25-205ENST00000449491 FAM117AQ9C073 453 aa9.54□□□□□ -0.88
USP25-205ENST00000449491 KDM4CQ9H3R0 1056 aa9.54□□□□□ -0.88
USP25-205ENST00000449491 WIPF1O43516 503 aa9.53□□□□□ -0.88
USP25-205ENST00000449491 WDR4P57081 412 aaKnown RBP9.53□□□□□ -0.88
USP25-205ENST00000449491 SH3BP5LQ7L8J4 393 aa9.53□□□□□ -0.88
USP25-205ENST00000449491 ARID5BQ14865 1188 aa9.52□□□□□ -0.89
USP25-205ENST00000449491 BPHLQ86WA6 291 aaPredicted RBP9.52□□□□□ -0.89
USP25-205ENST00000449491 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.52□□□□□ -0.89
USP25-205ENST00000449491 ZFAND3Q9H8U3 227 aa9.52□□□□□ -0.89
USP25-205ENST00000449491 SKIV2LQ15477 1246 aaKnown RBP9.51□□□□□ -0.89
USP25-205ENST00000449491 MRPL14Q6P1L8 145 aaKnown RBP9.51□□□□□ -0.89
USP25-205ENST00000449491 HELBQ8NG08 1087 aaPredicted RBP9.51□□□□□ -0.89
USP25-205ENST00000449491 ITPKCQ96DU7 683 aa9.51□□□□□ -0.89
USP25-205ENST00000449491 AGERQ15109 404 aa9.5□□□□□ -0.89
USP25-205ENST00000449491 SH3D19Q5HYK7 790 aa9.5□□□□□ -0.89
USP25-205ENST00000449491 ARMC2Q8NEN0 867 aa9.5□□□□□ -0.89
USP25-205ENST00000449491 LRRN4Q8WUT4 740 aa9.5□□□□□ -0.89
USP25-205ENST00000449491 NR5A1Q13285 461 aa9.49□□□□□ -0.89
USP25-205ENST00000449491 NXF1Q9UBU9 619 aaKnown RBP9.49□□□□□ -0.89
USP25-205ENST00000449491 ZIC2O95409 532 aaPredicted RBP9.48□□□□□ -0.89
USP25-205ENST00000449491 PPP2R2DQ66LE6 453 aa9.48□□□□□ -0.89
USP25-205ENST00000449491 TRMT44Q8IYL2 757 aaKnown RBP9.48□□□□□ -0.89
USP25-205ENST00000449491 PURBQ96QR8 312 aaKnown RBP9.48□□□□□ -0.89
USP25-205ENST00000449491 SOBPA7XYQ1 873 aa9.46□□□□□ -0.9
USP25-205ENST00000449491 VEGFBP49765 207 aa9.46□□□□□ -0.9
USP25-205ENST00000449491 NBPF14Q5TI25 921 aa9.46□□□□□ -0.9
USP25-205ENST00000449491 MAP4K5Q9Y4K4 846 aa9.46□□□□□ -0.9
USP25-205ENST00000449491 ERFEQ4G0M1 354 aa9.45□□□□□ -0.9
USP25-205ENST00000449491 OCSTAMPQ9BR26 566 aa9.45□□□□□ -0.9
USP25-205ENST00000449491 MAGEB6P1A0A0J9YX57 407 aa9.44□□□□□ -0.9
USP25-205ENST00000449491 NR6A1Q15406 480 aa9.44□□□□□ -0.9
USP25-205ENST00000449491 DDRGK1Q96HY6 314 aa9.44□□□□□ -0.9
USP25-205ENST00000449491 H3BM21 787 aa9.43□□□□□ -0.9
USP25-205ENST00000449491 LORP23490 312 aaPredicted RBP9.43□□□□□ -0.9
USP25-205ENST00000449491 FSHRP23945 695 aa9.43□□□□□ -0.9
USP25-205ENST00000449491 EPS8L1Q8TE68 723 aa9.43□□□□□ -0.9
USP25-205ENST00000449491 GPKOWQ92917 476 aaPredicted RBP eCLIP9.43□□□□□ -0.9
USP25-205ENST00000449491 ERBB4Q15303 1308 aa9.42□□□□□ -0.9
USP25-205ENST00000449491 GMPRP36959 345 aa9.42□□□□□ -0.9
USP25-205ENST00000449491 SCARF1Q14162 830 aa9.42□□□□□ -0.9
USP25-205ENST00000449491 PDXDC2PQ6P474 469 aa9.42□□□□□ -0.9
USP25-205ENST00000449491 NPAS3Q8IXF0 933 aa9.42□□□□□ -0.9
USP25-205ENST00000449491 CARD14Q9BXL6 1004 aa9.42□□□□□ -0.9
USP25-205ENST00000449491 FKBPLQ9UIM3 349 aa9.42□□□□□ -0.9
USP25-205ENST00000449491 VASH1Q7L8A9 365 aaPredicted RBP9.41□□□□□ -0.9
USP25-205ENST00000449491 MEIOBQ8N635 442 aa9.41□□□□□ -0.9
USP25-205ENST00000449491 C6orf118Q5T5N4 469 aa9.4□□□□□ -0.9
USP25-205ENST00000449491 HMX1Q9NP08 348 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms