RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 NGDNQ8NEJ9 315 aaKnown RBP14.89□□□□□ -0.03
SMPD4-211ENST00000449159 ALS2Q96Q42 1657 aa14.89□□□□□ -0.03
SMPD4-211ENST00000449159 ACEP12821 1306 aa14.89□□□□□ -0.03
SMPD4-211ENST00000449159 RBM6P78332 1123 aaKnown RBP14.88□□□□□ -0.03
SMPD4-211ENST00000449159 KRT28Q7Z3Y7 464 aa14.88□□□□□ -0.03
SMPD4-211ENST00000449159 NRKQ7Z2Y5 1582 aa14.88□□□□□ -0.03
SMPD4-211ENST00000449159 CD163L1Q9NR16 1453 aa14.88□□□□□ -0.03
SMPD4-211ENST00000449159 PSME1Q06323 249 aa14.87□□□□□ -0.03
SMPD4-211ENST00000449159 TNS3Q68CZ2 1445 aa14.86□□□□□ -0.03
SMPD4-211ENST00000449159 C11orf95C9JLR9 678 aaPredicted RBP14.86□□□□□ -0.03
SMPD4-211ENST00000449159 SLC24A1O60721 1099 aa14.86□□□□□ -0.03
SMPD4-211ENST00000449159 ZEB1P37275 1124 aaPredicted RBP14.86□□□□□ -0.03
SMPD4-211ENST00000449159 TMC1Q8TDI8 760 aa14.86□□□□□ -0.03
SMPD4-211ENST00000449159 ABCA3Q99758 1704 aa14.86□□□□□ -0.03
SMPD4-211ENST00000449159 ADAMTS2O95450 1211 aa14.85□□□□□ -0.03
SMPD4-211ENST00000449159 PUS7Q96PZ0 661 aaKnown RBP14.85□□□□□ -0.03
SMPD4-211ENST00000449159 SLC12A5Q9H2X9 1139 aa14.85□□□□□ -0.03
SMPD4-211ENST00000449159 SBNO1A3KN83 1393 aa14.85□□□□□ -0.03
SMPD4-211ENST00000449159 USP6P35125 1406 aa14.84□□□□□ -0.03
SMPD4-211ENST00000449159 CPSF1Q10570 1443 aaKnown RBP14.84□□□□□ -0.03
SMPD4-211ENST00000449159 QTRT2Q9H974 415 aaKnown RBP14.84□□□□□ -0.03
SMPD4-211ENST00000449159 SPATA31A3Q5VYP0 1347 aa14.84□□□□□ -0.03
SMPD4-211ENST00000449159 PIK3C2AO00443 1686 aa14.84□□□□□ -0.03
SMPD4-211ENST00000449159 PLCH1Q4KWH8 1693 aa14.84□□□□□ -0.03
SMPD4-211ENST00000449159 ATRNO75882 1429 aa14.83□□□□□ -0.03
SMPD4-211ENST00000449159 CRYBG1Q9Y4K1 1723 aa14.83□□□□□ -0.03
SMPD4-211ENST00000449159 NGLY1Q96IV0 654 aa14.83□□□□□ -0.04
SMPD4-211ENST00000449159 POLR3GLQ9BT43 218 aa14.83□□□□□ -0.04
SMPD4-211ENST00000449159 A0A1W2PP64 1363 aa14.83□□□□□ -0.04
SMPD4-211ENST00000449159 CDCA8Q53HL2 280 aa14.82□□□□□ -0.04
SMPD4-211ENST00000449159 NINLQ9Y2I6 1382 aa14.82□□□□□ -0.04
SMPD4-211ENST00000449159 SSH2Q76I76 1423 aa14.82□□□□□ -0.04
SMPD4-211ENST00000449159 PAK3O75914 559 aaPredicted RBP14.81□□□□□ -0.04
SMPD4-211ENST00000449159 KTN1Q86UP2 1357 aaKnown RBP14.81□□□□□ -0.04
SMPD4-211ENST00000449159 BRWD3Q6RI45 1802 aa14.8□□□□□ -0.04
SMPD4-211ENST00000449159 LMOD2Q6P5Q4 547 aa14.8□□□□□ -0.04
SMPD4-211ENST00000449159 USP21Q9UK80 565 aa14.8□□□□□ -0.04
SMPD4-211ENST00000449159 TRPC5Q9UL62 973 aaPredicted RBP14.8□□□□□ -0.04
SMPD4-211ENST00000449159 KIF7Q2M1P5 1343 aa14.8□□□□□ -0.04
SMPD4-211ENST00000449159 PHRF1Q9P1Y6 1649 aaKnown RBP14.8□□□□□ -0.04
SMPD4-211ENST00000449159 NWD2Q9ULI1 1742 aa14.8□□□□□ -0.04
SMPD4-211ENST00000449159 ARHGEF10O15013 1369 aa14.79□□□□□ -0.04
SMPD4-211ENST00000449159 PLEKHG5O94827 1062 aa14.79□□□□□ -0.04
SMPD4-211ENST00000449159 GLI3P10071 1580 aa14.78□□□□□ -0.04
SMPD4-211ENST00000449159 ANKRD36BQ8N2N9 1353 aa14.78□□□□□ -0.04
SMPD4-211ENST00000449159 TERF2IPQ9NYB0 399 aa14.78□□□□□ -0.04
SMPD4-211ENST00000449159 BCL9LQ86UU0 1499 aa14.77□□□□□ -0.04
SMPD4-211ENST00000449159 WASHC2AQ641Q2 1341 aa14.77□□□□□ -0.04
SMPD4-211ENST00000449159 TTC21BQ7Z4L5 1316 aa14.77□□□□□ -0.04
SMPD4-211ENST00000449159 NUTM2GQ5VZR2 741 aa14.77□□□□□ -0.05
SMPD4-211ENST00000449159 HDGFL2Q7Z4V5 671 aaPredicted RBP14.77□□□□□ -0.05
SMPD4-211ENST00000449159 CABLES1Q8TDN4 633 aa14.77□□□□□ -0.05
SMPD4-211ENST00000449159 ZNF692Q9BU19 519 aaPredicted RBP14.77□□□□□ -0.05
SMPD4-211ENST00000449159 KIF20BQ96Q89 1820 aa14.77□□□□□ -0.05
SMPD4-211ENST00000449159 EDC4Q6P2E9 1401 aaKnown RBP14.76□□□□□ -0.05
SMPD4-211ENST00000449159 BRD4O60885 1362 aaPredicted RBP14.76□□□□□ -0.05
SMPD4-211ENST00000449159 CCDC7Q96M83 1385 aa14.76□□□□□ -0.05
SMPD4-211ENST00000449159 FNBP4Q8N3X1 1017 aaPredicted RBP14.76□□□□□ -0.05
SMPD4-211ENST00000449159 USP54Q70EL1 1684 aa14.76□□□□□ -0.05
SMPD4-211ENST00000449159 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.75□□□□□ -0.05
SMPD4-211ENST00000449159 ABTB2Q8N961 1025 aa14.75□□□□□ -0.05
SMPD4-211ENST00000449159 NSD3Q9BZ95 1437 aa14.74□□□□□ -0.05
SMPD4-211ENST00000449159 TTC21AQ8NDW8 1320 aa14.73□□□□□ -0.05
SMPD4-211ENST00000449159 SLIT2O94813 1529 aa14.73□□□□□ -0.05
SMPD4-211ENST00000449159 NRAPQ86VF7 1730 aa14.73□□□□□ -0.05
SMPD4-211ENST00000449159 NME9Q86XW9 330 aa14.73□□□□□ -0.05
SMPD4-211ENST00000449159 CARD14Q9BXL6 1004 aa14.73□□□□□ -0.05
SMPD4-211ENST00000449159 ZRANB1Q9UGI0 708 aa14.73□□□□□ -0.05
SMPD4-211ENST00000449159 SLIT3O75094 1523 aa14.72□□□□□ -0.05
SMPD4-211ENST00000449159 USP19O94966 1318 aa14.71□□□□□ -0.05
SMPD4-211ENST00000449159 NLRP6P59044 892 aa14.71□□□□□ -0.05
SMPD4-211ENST00000449159 LRP5O75197 1615 aa14.7□□□□□ -0.06
SMPD4-211ENST00000449159 PANK3Q9H999 370 aa14.7□□□□□ -0.06
SMPD4-211ENST00000449159 ANKRD26Q9UPS8 1709 aa14.69□□□□□ -0.06
SMPD4-211ENST00000449159 OVOS2A0A0J9YW53 1432 aa14.69□□□□□ -0.06
SMPD4-211ENST00000449159 OVOS2Q6IE36 1432 aa14.69□□□□□ -0.06
SMPD4-211ENST00000449159 HAP1P54257 671 aaPredicted RBP14.69□□□□□ -0.06
SMPD4-211ENST00000449159 NLRP13Q86W25 1043 aa14.69□□□□□ -0.06
SMPD4-211ENST00000449159 USP31Q70CQ4 1352 aa14.69□□□□□ -0.06
SMPD4-211ENST00000449159 BLMP54132 1417 aaPredicted RBP14.68□□□□□ -0.06
SMPD4-211ENST00000449159 LTN1O94822 1766 aa14.68□□□□□ -0.06
SMPD4-211ENST00000449159 NFAT5O94916 1531 aa14.68□□□□□ -0.06
SMPD4-211ENST00000449159 COL14A1Q05707 1796 aaKnown RBP14.68□□□□□ -0.06
SMPD4-211ENST00000449159 RGPD1P0DJD0 1748 aa14.67□□□□□ -0.06
SMPD4-211ENST00000449159 CCDC125Q86Z20 511 aa14.67□□□□□ -0.06
SMPD4-211ENST00000449159 GJD4Q96KN9 370 aaPredicted RBP14.67□□□□□ -0.06
SMPD4-211ENST00000449159 KIAA0232Q92628 1395 aa14.66□□□□□ -0.06
SMPD4-211ENST00000449159 FYB1O15117 783 aa14.66□□□□□ -0.06
SMPD4-211ENST00000449159 SOX12O15370 315 aa14.66□□□□□ -0.06
SMPD4-211ENST00000449159 GGNBP2Q9H3C7 697 aa14.66□□□□□ -0.06
SMPD4-211ENST00000449159 GCP02774 474 aa14.65□□□□□ -0.06
SMPD4-211ENST00000449159 ZC3H6P61129 1189 aaKnown RBP14.65□□□□□ -0.06
SMPD4-211ENST00000449159 COL18A1P39060 1754 aa14.65□□□□□ -0.06
SMPD4-211ENST00000449159 RGPD5Q99666 1765 aa14.65□□□□□ -0.06
SMPD4-211ENST00000449159 LMO7Q8WWI1 1683 aa14.65□□□□□ -0.06
SMPD4-211ENST00000449159 UNC5CLQ8IV45 518 aa14.64□□□□□ -0.07
SMPD4-211ENST00000449159 FAM83GA6ND36 823 aa14.63□□□□□ -0.07
SMPD4-211ENST00000449159 TNS1Q9HBL0 1735 aaKnown RBP14.63□□□□□ -0.07
SMPD4-211ENST00000449159 CGNL1Q0VF96 1302 aa14.63□□□□□ -0.07
SMPD4-211ENST00000449159 CPDO75976 1380 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms