RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 GJA3Q9Y6H8 435 aa7.16□□□□□ -1.26
CDC42BPA-209ENST00000448940 SMARCC1Q92922 1105 aaPredicted RBP7.16□□□□□ -1.26
CDC42BPA-209ENST00000448940 VTI1AQ96AJ9 217 aa7.15□□□□□ -1.26
CDC42BPA-209ENST00000448940 ANO8Q9HCE9 1232 aaPredicted RBP7.15□□□□□ -1.26
CDC42BPA-209ENST00000448940 IBSPP21815 317 aaPredicted RBP7.15□□□□□ -1.26
CDC42BPA-209ENST00000448940 HNRNPUQ00839 825 aaKnown RBP eCLIP7.15□□□□□ -1.26
CDC42BPA-209ENST00000448940 ABCC5O15440 1437 aa7.15□□□□□ -1.26
CDC42BPA-209ENST00000448940 SOCS7O14512 581 aa7.15□□□□□ -1.27
CDC42BPA-209ENST00000448940 DDX58O95786 925 aaKnown RBP7.15□□□□□ -1.27
CDC42BPA-209ENST00000448940 MTHFSP49914 203 aa7.15□□□□□ -1.27
CDC42BPA-209ENST00000448940 GAS2L2Q8NHY3 880 aa7.15□□□□□ -1.27
CDC42BPA-209ENST00000448940 RPGRQ92834 1020 aaKnown RBP7.15□□□□□ -1.27
CDC42BPA-209ENST00000448940 ERCC6L2Q5T890 1561 aa7.15□□□□□ -1.27
CDC42BPA-209ENST00000448940 TMOD2Q9NZR1 351 aa7.15□□□□□ -1.27
CDC42BPA-209ENST00000448940 NCOA1Q15788 1441 aa7.14□□□□□ -1.27
CDC42BPA-209ENST00000448940 ARHGEF10O15013 1369 aa7.14□□□□□ -1.27
CDC42BPA-209ENST00000448940 EIF2S2P20042 333 aaKnown RBP7.14□□□□□ -1.27
CDC42BPA-209ENST00000448940 LTKP29376 864 aa7.14□□□□□ -1.27
CDC42BPA-209ENST00000448940 FGD1P98174 961 aa7.14□□□□□ -1.27
CDC42BPA-209ENST00000448940 ORAI2Q96SN7 254 aa7.14□□□□□ -1.27
CDC42BPA-209ENST00000448940 DUOX2Q9NRD8 1548 aa7.14□□□□□ -1.27
CDC42BPA-209ENST00000448940 TRIM37O94972 964 aa7.14□□□□□ -1.27
CDC42BPA-209ENST00000448940 ARHGEF6Q15052 776 aa7.14□□□□□ -1.27
CDC42BPA-209ENST00000448940 KRT27Q7Z3Y8 459 aa7.14□□□□□ -1.27
CDC42BPA-209ENST00000448940 ZNF652Q9Y2D9 606 aa7.14□□□□□ -1.27
CDC42BPA-209ENST00000448940 MAPKBP1O60336 1514 aa7.14□□□□□ -1.27
CDC42BPA-209ENST00000448940 STARD3NLO95772 234 aa7.14□□□□□ -1.27
CDC42BPA-209ENST00000448940 CLASP1Q7Z460 1538 aa7.14□□□□□ -1.27
CDC42BPA-209ENST00000448940 PANK3Q9H999 370 aa7.14□□□□□ -1.27
CDC42BPA-209ENST00000448940 PTPRMP28827 1452 aa7.14□□□□□ -1.27
CDC42BPA-209ENST00000448940 RPRD2Q5VT52 1461 aaKnown RBP7.14□□□□□ -1.27
CDC42BPA-209ENST00000448940 JCADQ9P266 1359 aa7.14□□□□□ -1.27
CDC42BPA-209ENST00000448940 PCF11O94913 1555 aaKnown RBP7.13□□□□□ -1.27
CDC42BPA-209ENST00000448940 MS4A1P11836 297 aa7.13□□□□□ -1.27
CDC42BPA-209ENST00000448940 NBR1Q14596 966 aa7.13□□□□□ -1.27
CDC42BPA-209ENST00000448940 R3HDM1Q15032 1099 aaKnown RBP7.13□□□□□ -1.27
CDC42BPA-209ENST00000448940 NOS1P29475 1434 aa7.13□□□□□ -1.27
CDC42BPA-209ENST00000448940 AFF2P51816 1311 aa7.13□□□□□ -1.27
CDC42BPA-209ENST00000448940 RTL5Q5HYW3 569 aaPredicted RBP7.13□□□□□ -1.27
CDC42BPA-209ENST00000448940 TIAM1Q13009 1591 aa7.13□□□□□ -1.27
CDC42BPA-209ENST00000448940 FAM196AQ6ZSG2 479 aa7.13□□□□□ -1.27
CDC42BPA-209ENST00000448940 ATP7AQ04656 1500 aa7.13□□□□□ -1.27
CDC42BPA-209ENST00000448940 ADGRF5Q8IZF2 1346 aa7.13□□□□□ -1.27
CDC42BPA-209ENST00000448940 CHMP4BP1P59074 171 aa7.12□□□□□ -1.27
CDC42BPA-209ENST00000448940 ST5P78524 1137 aa7.12□□□□□ -1.27
CDC42BPA-209ENST00000448940 RRP7AQ9Y3A4 280 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-209ENST00000448940 EP400NLQ6ZTU2 488 aa7.12□□□□□ -1.27
CDC42BPA-209ENST00000448940 ZSCAN29Q8IWY8 852 aaPredicted RBP7.12□□□□□ -1.27
CDC42BPA-209ENST00000448940 NLRP1Q9C000 1473 aa7.12□□□□□ -1.27
CDC42BPA-209ENST00000448940 SLC12A5Q9H2X9 1139 aa7.12□□□□□ -1.27
CDC42BPA-209ENST00000448940 C14orf93Q9H972 538 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-209ENST00000448940 IKQ13123 557 aaPredicted RBP7.12□□□□□ -1.27
CDC42BPA-209ENST00000448940 ACEP12821 1306 aa7.12□□□□□ -1.27
CDC42BPA-209ENST00000448940 FAM83GA6ND36 823 aa7.11□□□□□ -1.27
CDC42BPA-209ENST00000448940 TCP11L2Q8N4U5 519 aa7.11□□□□□ -1.27
CDC42BPA-209ENST00000448940 MLH3Q9UHC1 1453 aa7.11□□□□□ -1.27
CDC42BPA-209ENST00000448940 PTCD1O75127 700 aaKnown RBP7.11□□□□□ -1.27
CDC42BPA-209ENST00000448940 SPRYD3Q8NCJ5 442 aa7.11□□□□□ -1.27
CDC42BPA-209ENST00000448940 PLIN1O60240 522 aa7.11□□□□□ -1.27
CDC42BPA-209ENST00000448940 IL2RBP14784 551 aa7.11□□□□□ -1.27
CDC42BPA-209ENST00000448940 SPATA31A6Q5VVP1 1343 aa7.11□□□□□ -1.27
CDC42BPA-209ENST00000448940 SCAF11Q99590 1463 aaKnown RBP7.1□□□□□ -1.27
CDC42BPA-209ENST00000448940 SETD1BQ9UPS6 1966 aaKnown RBP7.1□□□□□ -1.27
CDC42BPA-209ENST00000448940 RALBP1Q15311 655 aa7.1□□□□□ -1.27
CDC42BPA-209ENST00000448940 RBM26Q5T8P6 1007 aaKnown RBP7.1□□□□□ -1.27
CDC42BPA-209ENST00000448940 EIF6P56537 245 aaKnown RBP7.1□□□□□ -1.27
CDC42BPA-209ENST00000448940 USP47Q96K76 1375 aa7.1□□□□□ -1.27
CDC42BPA-209ENST00000448940 GRIN3BO60391 1043 aa7.1□□□□□ -1.27
CDC42BPA-209ENST00000448940 KIF22Q14807 665 aa7.1□□□□□ -1.27
CDC42BPA-209ENST00000448940 CCDC85CA6NKD9 419 aa7.1□□□□□ -1.27
CDC42BPA-209ENST00000448940 CA8P35219 290 aa7.1□□□□□ -1.27
CDC42BPA-209ENST00000448940 ANKRD24Q8TF21 1146 aa7.1□□□□□ -1.27
CDC42BPA-209ENST00000448940 HMOX1P09601 288 aa7.1□□□□□ -1.27
CDC42BPA-209ENST00000448940 NBPF1Q3BBV0 1214 aa7.1□□□□□ -1.27
CDC42BPA-209ENST00000448940 ZCRB1Q8TBF4 217 aaKnown RBP7.1□□□□□ -1.27
CDC42BPA-209ENST00000448940 UGGT1Q9NYU2 1555 aa7.09□□□□□ -1.27
CDC42BPA-209ENST00000448940 AMOTQ4VCS5 1084 aa7.09□□□□□ -1.27
CDC42BPA-209ENST00000448940 IPO8O15397 1037 aaKnown RBP7.09□□□□□ -1.27
CDC42BPA-209ENST00000448940 CCDC87Q9NVE4 849 aa7.09□□□□□ -1.27
CDC42BPA-209ENST00000448940 FRAT1Q92837 279 aaPredicted RBP7.09□□□□□ -1.27
CDC42BPA-209ENST00000448940 SEPT12Q8IYM1 358 aa7.09□□□□□ -1.27
CDC42BPA-209ENST00000448940 TOMM22Q9NS69 142 aa7.09□□□□□ -1.27
CDC42BPA-209ENST00000448940 MYO1BO43795 1136 aa7.09□□□□□ -1.28
CDC42BPA-209ENST00000448940 TCIRG1Q13488 830 aa7.09□□□□□ -1.28
CDC42BPA-209ENST00000448940 TTC21AQ8NDW8 1320 aa7.09□□□□□ -1.28
CDC42BPA-209ENST00000448940 ZBTB7AO95365 584 aa7.08□□□□□ -1.28
CDC42BPA-209ENST00000448940 GCP02774 474 aa7.08□□□□□ -1.28
CDC42BPA-209ENST00000448940 SLC4A10Q6U841 1118 aa7.08□□□□□ -1.28
CDC42BPA-209ENST00000448940 MSL1Q68DK7 614 aa7.08□□□□□ -1.28
CDC42BPA-209ENST00000448940 SULT6B1Q6IMI4 303 aa7.08□□□□□ -1.28
CDC42BPA-209ENST00000448940 IFNL2Q8IZJ0 200 aa7.08□□□□□ -1.28
CDC42BPA-209ENST00000448940 PNISRQ8TF01 805 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-209ENST00000448940 DDX17Q92841 729 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-209ENST00000448940 TSPYL4Q9UJ04 414 aa7.08□□□□□ -1.28
CDC42BPA-209ENST00000448940 A0A087WZG4 1122 aa7.08□□□□□ -1.28
CDC42BPA-209ENST00000448940 KCNA4P22459 653 aa7.08□□□□□ -1.28
CDC42BPA-209ENST00000448940 PRKAG2Q9UGJ0 569 aa7.08□□□□□ -1.28
CDC42BPA-209ENST00000448940 NOL8Q76FK4 1167 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-209ENST00000448940 RIC3Q7Z5B4 369 aa7.08□□□□□ -1.28
CDC42BPA-209ENST00000448940 UNC5CLQ8IV45 518 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms