RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 ROCK2O75116 1388 aaKnown RBP35.76■■■■□ 3.31
HTATSF1-203ENST00000448450 EIF3AQ14152 1382 aaKnown RBP35.75■■■■□ 3.31
HTATSF1-203ENST00000448450 NRAPQ86VF7 1730 aa35.72■■■■□ 3.31
HTATSF1-203ENST00000448450 ONECUT3O60422 494 aaPredicted RBP35.72■■■■□ 3.31
HTATSF1-203ENST00000448450 ALS2Q96Q42 1657 aa35.72■■■■□ 3.31
HTATSF1-203ENST00000448450 GPRASP1Q5JY77 1395 aa35.71■■■■□ 3.31
HTATSF1-203ENST00000448450 DEFB132Q7Z7B7 95 aa35.7■■■■□ 3.31
HTATSF1-203ENST00000448450 CENPJQ9HC77 1338 aaPredicted RBP35.7■■■■□ 3.31
HTATSF1-203ENST00000448450 TULP4Q9NRJ4 1543 aa35.7■■■■□ 3.31
HTATSF1-203ENST00000448450 FAM83GA6ND36 823 aa35.69■■■■□ 3.3
HTATSF1-203ENST00000448450 KRT27Q7Z3Y8 459 aa35.69■■■■□ 3.3
HTATSF1-203ENST00000448450 PRR36Q9H6K5 1346 aa35.68■■■■□ 3.3
HTATSF1-203ENST00000448450 CDK19Q9BWU1 502 aa35.68■■■■□ 3.3
HTATSF1-203ENST00000448450 COL14A1Q05707 1796 aaKnown RBP35.68■■■■□ 3.3
HTATSF1-203ENST00000448450 A0A0G2JS52 829 aa35.67■■■■□ 3.3
HTATSF1-203ENST00000448450 MYT1Q01538 1121 aa35.67■■■■□ 3.3
HTATSF1-203ENST00000448450 CCER1Q8TC90 406 aaPredicted RBP35.64■■■■□ 3.3
HTATSF1-203ENST00000448450 NUDT16Q96DE0 195 aaKnown RBP35.62■■■■□ 3.29
HTATSF1-203ENST00000448450 BTG4Q9NY30 223 aa35.62■■■■□ 3.29
HTATSF1-203ENST00000448450 CARD11Q9BXL7 1154 aa35.61■■■■□ 3.29
HTATSF1-203ENST00000448450 ITSN1Q15811 1721 aa35.6■■■■□ 3.29
HTATSF1-203ENST00000448450 CRYBG1Q9Y4K1 1723 aa35.6■■■■□ 3.29
HTATSF1-203ENST00000448450 CLSPNQ9HAW4 1339 aa35.59■■■■□ 3.29
HTATSF1-203ENST00000448450 FAM98CQ17RN3 349 aaKnown RBP35.59■■■■□ 3.29
HTATSF1-203ENST00000448450 QRICH2Q9H0J4 1663 aa35.58■■■■□ 3.29
HTATSF1-203ENST00000448450 NGDNQ8NEJ9 315 aaKnown RBP35.56■■■■□ 3.28
HTATSF1-203ENST00000448450 SRPK2P78362 688 aaKnown RBP35.55■■■■□ 3.28
HTATSF1-203ENST00000448450 BAG6P46379 1132 aa35.54■■■■□ 3.28
HTATSF1-203ENST00000448450 LRP5O75197 1615 aa35.54■■■■□ 3.28
HTATSF1-203ENST00000448450 PAK3O75914 559 aaPredicted RBP35.53■■■■□ 3.28
HTATSF1-203ENST00000448450 CABP2Q9NPB3 220 aa35.53■■■■□ 3.28
HTATSF1-203ENST00000448450 ATP7BP35670 1465 aa35.53■■■■□ 3.28
HTATSF1-203ENST00000448450 RGPD1P0DJD0 1748 aa35.52■■■■□ 3.28
HTATSF1-203ENST00000448450 PRDM11Q9NQV5 511 aa35.49■■■■□ 3.27
HTATSF1-203ENST00000448450 CCDC61Q9Y6R9 512 aa35.49■■■■□ 3.27
HTATSF1-203ENST00000448450 SPATA31A5Q5VU36 1347 aa35.49■■■■□ 3.27
HTATSF1-203ENST00000448450 SPATA31A7Q8IWB4 1347 aa35.49■■■■□ 3.27
HTATSF1-203ENST00000448450 THSD7AQ9UPZ6 1657 aa35.49■■■■□ 3.27
HTATSF1-203ENST00000448450 TIMELESSQ9UNS1 1208 aa35.46■■■■□ 3.27
HTATSF1-203ENST00000448450 PHRF1Q9P1Y6 1649 aaKnown RBP35.46■■■■□ 3.27
HTATSF1-203ENST00000448450 EVC2Q86UK5 1308 aa35.45■■■■□ 3.27
HTATSF1-203ENST00000448450 KIAA0232Q92628 1395 aa35.4■■■■□ 3.26
HTATSF1-203ENST00000448450 ACEP12821 1306 aa35.4■■■■□ 3.26
HTATSF1-203ENST00000448450 TNS1Q9HBL0 1735 aaKnown RBP35.4■■■■□ 3.26
HTATSF1-203ENST00000448450 TOPAZ1Q8N9V7 1692 aa35.4■■■■□ 3.26
HTATSF1-203ENST00000448450 PLEKHG3A1L390 1219 aa35.39■■■■□ 3.26
HTATSF1-203ENST00000448450 PSDA5PKW4 1024 aaPredicted RBP35.39■■■■□ 3.26
HTATSF1-203ENST00000448450 FAM182BQ5T319 152 aa35.39■■■■□ 3.26
HTATSF1-203ENST00000448450 PPIP5K1Q6PFW1 1433 aa35.38■■■■□ 3.25
HTATSF1-203ENST00000448450 EN1Q05925 392 aaPredicted RBP35.36■■■■□ 3.25
HTATSF1-203ENST00000448450 CABP1Q9NZU7 370 aa35.36■■■■□ 3.25
HTATSF1-203ENST00000448450 SPATA31A1Q5TZJ5 1347 aa35.35■■■■□ 3.25
HTATSF1-203ENST00000448450 DISP2A7MBM2 1401 aa35.35■■■■□ 3.25
HTATSF1-203ENST00000448450 CHRNA2Q15822 529 aa35.33■■■■□ 3.25
HTATSF1-203ENST00000448450 POLR3AO14802 1390 aaPredicted RBP35.33■■■■□ 3.25
HTATSF1-203ENST00000448450 STRN4Q9NRL3 753 aa35.32■■■■□ 3.24
HTATSF1-203ENST00000448450 ST20-MTHFSA0A0A6YYL1 179 aa35.31■■■■□ 3.24
HTATSF1-203ENST00000448450 SBNO2Q9Y2G9 1366 aa35.29■■■■□ 3.24
HTATSF1-203ENST00000448450 ZC3H6P61129 1189 aaKnown RBP35.29■■■■□ 3.24
HTATSF1-203ENST00000448450 NRKQ7Z2Y5 1582 aa35.29■■■■□ 3.24
HTATSF1-203ENST00000448450 NUTM2GQ5VZR2 741 aa35.28■■■■□ 3.24
HTATSF1-203ENST00000448450 FAM196AQ6ZSG2 479 aa35.25■■■■□ 3.23
HTATSF1-203ENST00000448450 SSH2Q76I76 1423 aa35.24■■■■□ 3.23
HTATSF1-203ENST00000448450 R3HDM1Q15032 1099 aaKnown RBP35.23■■■■□ 3.23
HTATSF1-203ENST00000448450 USP47Q96K76 1375 aa35.23■■■■□ 3.23
HTATSF1-203ENST00000448450 EVA1CP58658 441 aa35.22■■■■□ 3.23
HTATSF1-203ENST00000448450 TESK2Q96S53 571 aa35.22■■■■□ 3.23
HTATSF1-203ENST00000448450 USP35Q9P2H5 1018 aa35.22■■■■□ 3.23
HTATSF1-203ENST00000448450 TRIM37O94972 964 aa35.21■■■■□ 3.23
HTATSF1-203ENST00000448450 ABTB2Q8N961 1025 aa35.21■■■■□ 3.23
HTATSF1-203ENST00000448450 EZH2Q15910 746 aaKnown RBP35.2■■■■□ 3.23
HTATSF1-203ENST00000448450 LMO7Q8WWI1 1683 aa35.2■■■■□ 3.23
HTATSF1-203ENST00000448450 CPDO75976 1380 aa35.19■■■■□ 3.22
HTATSF1-203ENST00000448450 BARGINQ6ZT62 677 aa35.19■■■■□ 3.22
HTATSF1-203ENST00000448450 PARD3Q8TEW0 1356 aa35.19■■■■□ 3.22
HTATSF1-203ENST00000448450 CAMTA1Q9Y6Y1 1673 aa35.19■■■■□ 3.22
HTATSF1-203ENST00000448450 USP19O94966 1318 aa35.17■■■■□ 3.22
HTATSF1-203ENST00000448450 TMC1Q8TDI8 760 aa35.17■■■■□ 3.22
HTATSF1-203ENST00000448450 PDE3BQ13370 1112 aa35.16■■■■□ 3.22
HTATSF1-203ENST00000448450 CAMKK2Q96RR4 588 aa35.15■■■■□ 3.22
HTATSF1-203ENST00000448450 APBA3O96018 575 aa35.14■■■■□ 3.22
HTATSF1-203ENST00000448450 USP6P35125 1406 aa35.14■■■■□ 3.22
HTATSF1-203ENST00000448450 LARP1Q6PKG0 1096 aaKnown RBP35.13■■■■□ 3.21
HTATSF1-203ENST00000448450 RREB1Q92766 1687 aa35.12■■■■□ 3.21
HTATSF1-203ENST00000448450 NLRP13Q86W25 1043 aa35.12■■■■□ 3.21
HTATSF1-203ENST00000448450 TCP11L2Q8N4U5 519 aa35.12■■■■□ 3.21
HTATSF1-203ENST00000448450 ZNF692Q9BU19 519 aaPredicted RBP35.12■■■■□ 3.21
HTATSF1-203ENST00000448450 SLC12A5Q9H2X9 1139 aa35.1■■■■□ 3.21
HTATSF1-203ENST00000448450 SLC24A1O60721 1099 aa35.09■■■■□ 3.21
HTATSF1-203ENST00000448450 BRD4O60885 1362 aaPredicted RBP35.09■■■■□ 3.21
HTATSF1-203ENST00000448450 PARP4Q9UKK3 1724 aaKnown RBP35.09■■■■□ 3.21
HTATSF1-203ENST00000448450 THRAP3Q9Y2W1 955 aaKnown RBP35.08■■■■□ 3.21
HTATSF1-203ENST00000448450 NUP188Q5SRE5 1749 aa35.08■■■■□ 3.21
HTATSF1-203ENST00000448450 GCP02774 474 aa35.07■■■■□ 3.2
HTATSF1-203ENST00000448450 TMF1P82094 1093 aa35.07■■■■□ 3.2
HTATSF1-203ENST00000448450 PUS7Q96PZ0 661 aaKnown RBP35.07■■■■□ 3.2
HTATSF1-203ENST00000448450 COL5A2P05997 1499 aaPredicted RBP35.07■■■■□ 3.2
HTATSF1-203ENST00000448450 AKAP12Q02952 1782 aa35.06■■■■□ 3.2
HTATSF1-203ENST00000448450 KTN1Q86UP2 1357 aaKnown RBP35.06■■■■□ 3.2
HTATSF1-203ENST00000448450 CPSF1Q10570 1443 aaKnown RBP35.05■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms