RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 CDK19Q9BWU1 502 aa41.06■■■■■ 4.16
CBX4-202ENST00000448310 COL14A1Q05707 1796 aaKnown RBP41.05■■■■■ 4.16
CBX4-202ENST00000448310 CCDC125Q86Z20 511 aa41.03■■■■■ 4.16
CBX4-202ENST00000448310 TOPAZ1Q8N9V7 1692 aa41.03■■■■■ 4.16
CBX4-202ENST00000448310 BTG4Q9NY30 223 aa41.02■■■■■ 4.16
CBX4-202ENST00000448310 ONECUT3O60422 494 aaPredicted RBP40.97■■■■■ 4.15
CBX4-202ENST00000448310 BLMP54132 1417 aaPredicted RBP40.94■■■■■ 4.14
CBX4-202ENST00000448310 PHRF1Q9P1Y6 1649 aaKnown RBP40.94■■■■■ 4.14
CBX4-202ENST00000448310 A0A0G2JS52 829 aa40.93■■■■■ 4.14
CBX4-202ENST00000448310 MYT1Q01538 1121 aa40.93■■■■■ 4.14
CBX4-202ENST00000448310 ACEP12821 1306 aa40.92■■■■■ 4.14
CBX4-202ENST00000448310 POLR3AO14802 1390 aaPredicted RBP40.91■■■■■ 4.14
CBX4-202ENST00000448310 FAM98CQ17RN3 349 aaKnown RBP40.91■■■■■ 4.14
CBX4-202ENST00000448310 KRT27Q7Z3Y8 459 aa40.91■■■■■ 4.14
CBX4-202ENST00000448310 CCDC61Q9Y6R9 512 aa40.91■■■■■ 4.14
CBX4-202ENST00000448310 NUTM2GQ5VZR2 741 aa40.9■■■■■ 4.14
CBX4-202ENST00000448310 PRDM11Q9NQV5 511 aa40.9■■■■■ 4.14
CBX4-202ENST00000448310 ZRANB1Q9UGI0 708 aa40.89■■■■■ 4.14
CBX4-202ENST00000448310 NBPF8Q3BBV2 869 aa40.88■■■■■ 4.13
CBX4-202ENST00000448310 QRICH2Q9H0J4 1663 aa40.87■■■■■ 4.13
CBX4-202ENST00000448310 CENPJQ9HC77 1338 aaPredicted RBP40.86■■■■■ 4.13
CBX4-202ENST00000448310 KIAA0232Q92628 1395 aa40.86■■■■■ 4.13
CBX4-202ENST00000448310 PLEKHG3A1L390 1219 aa40.85■■■■■ 4.13
CBX4-202ENST00000448310 DEFB132Q7Z7B7 95 aa40.85■■■■■ 4.13
CBX4-202ENST00000448310 L3MBTL2Q969R5 705 aa40.85■■■■■ 4.13
CBX4-202ENST00000448310 CHRNA2Q15822 529 aa40.83■■■■■ 4.13
CBX4-202ENST00000448310 SPATA31A5Q5VU36 1347 aa40.83■■■■■ 4.13
CBX4-202ENST00000448310 SPATA31A7Q8IWB4 1347 aa40.83■■■■■ 4.13
CBX4-202ENST00000448310 SRPK2P78362 688 aaKnown RBP40.82■■■■■ 4.13
CBX4-202ENST00000448310 SIN3AQ96ST3 1273 aa40.82■■■■■ 4.13
CBX4-202ENST00000448310 ZC3H6P61129 1189 aaKnown RBP40.81■■■■■ 4.12
CBX4-202ENST00000448310 SF3B2Q13435 895 aaKnown RBP40.8■■■■■ 4.12
CBX4-202ENST00000448310 CABP2Q9NPB3 220 aa40.8■■■■■ 4.12
CBX4-202ENST00000448310 PPIP5K1Q6PFW1 1433 aa40.79■■■■■ 4.12
CBX4-202ENST00000448310 SRCAPQ6ZRS2 3230 aa40.77■■■■■ 4.12
CBX4-202ENST00000448310 TRPM1Q7Z4N2 1603 aa40.76■■■■■ 4.12
CBX4-202ENST00000448310 NRKQ7Z2Y5 1582 aa40.76■■■■■ 4.12
CBX4-202ENST00000448310 THSD7AQ9UPZ6 1657 aa40.75■■■■■ 4.11
CBX4-202ENST00000448310 ABTB2Q8N961 1025 aa40.75■■■■■ 4.11
CBX4-202ENST00000448310 STRN4Q9NRL3 753 aa40.74■■■■■ 4.11
CBX4-202ENST00000448310 NEUROD1Q13562 356 aa40.72■■■■■ 4.11
CBX4-202ENST00000448310 FAM182BQ5T319 152 aa40.72■■■■■ 4.11
CBX4-202ENST00000448310 SPATA31A1Q5TZJ5 1347 aa40.69■■■■■ 4.11
CBX4-202ENST00000448310 USP19O94966 1318 aa40.66■■■■■ 4.1
CBX4-202ENST00000448310 CABP1Q9NZU7 370 aa40.64■■■■■ 4.1
CBX4-202ENST00000448310 RGPD1P0DJD0 1748 aa40.64■■■■■ 4.1
CBX4-202ENST00000448310 CAMTA1Q9Y6Y1 1673 aa40.63■■■■■ 4.1
CBX4-202ENST00000448310 LMO7Q8WWI1 1683 aa40.62■■■■■ 4.09
CBX4-202ENST00000448310 USP35Q9P2H5 1018 aa40.62■■■■■ 4.09
CBX4-202ENST00000448310 SSH2Q76I76 1423 aa40.61■■■■■ 4.09
CBX4-202ENST00000448310 EVA1CP58658 441 aa40.61■■■■■ 4.09
CBX4-202ENST00000448310 NLRP13Q86W25 1043 aa40.61■■■■■ 4.09
CBX4-202ENST00000448310 ROCK2O75116 1388 aaKnown RBP40.61■■■■■ 4.09
CBX4-202ENST00000448310 BAG6P46379 1132 aa40.6■■■■■ 4.09
CBX4-202ENST00000448310 CPDO75976 1380 aa40.6■■■■■ 4.09
CBX4-202ENST00000448310 USP6P35125 1406 aa40.59■■■■■ 4.09
CBX4-202ENST00000448310 GCP02774 474 aa40.57■■■■■ 4.09
CBX4-202ENST00000448310 EVC2Q86UK5 1308 aa40.57■■■■■ 4.08
CBX4-202ENST00000448310 TNS1Q9HBL0 1735 aaKnown RBP40.56■■■■■ 4.08
CBX4-202ENST00000448310 LARP1Q6PKG0 1096 aaKnown RBP40.55■■■■■ 4.08
CBX4-202ENST00000448310 BRD4O60885 1362 aaPredicted RBP40.55■■■■■ 4.08
CBX4-202ENST00000448310 PIK3C2AO00443 1686 aa40.51■■■■■ 4.08
CBX4-202ENST00000448310 EN1Q05925 392 aaPredicted RBP40.51■■■■■ 4.08
CBX4-202ENST00000448310 NLRP6P59044 892 aa40.5■■■■■ 4.07
CBX4-202ENST00000448310 ZBTB7CA1YPR0 619 aa40.49■■■■■ 4.07
CBX4-202ENST00000448310 BARGINQ6ZT62 677 aa40.48■■■■■ 4.07
CBX4-202ENST00000448310 SLIT3O75094 1523 aa40.47■■■■■ 4.07
CBX4-202ENST00000448310 AKAP12Q02952 1782 aa40.47■■■■■ 4.07
CBX4-202ENST00000448310 COL5A2P05997 1499 aaPredicted RBP40.46■■■■■ 4.07
CBX4-202ENST00000448310 TCP11L2Q8N4U5 519 aa40.45■■■■■ 4.07
CBX4-202ENST00000448310 PSDA5PKW4 1024 aaPredicted RBP40.44■■■■■ 4.06
CBX4-202ENST00000448310 TRIM37O94972 964 aa40.43■■■■■ 4.06
CBX4-202ENST00000448310 FAM196AQ6ZSG2 479 aa40.43■■■■■ 4.06
CBX4-202ENST00000448310 DISP2A7MBM2 1401 aa40.41■■■■■ 4.06
CBX4-202ENST00000448310 PDE3BQ13370 1112 aa40.4■■■■■ 4.06
CBX4-202ENST00000448310 COL18A1P39060 1754 aa40.38■■■■■ 4.05
CBX4-202ENST00000448310 TTC21BQ7Z4L5 1316 aa40.37■■■■■ 4.05
CBX4-202ENST00000448310 PARP4Q9UKK3 1724 aaKnown RBP40.36■■■■■ 4.05
CBX4-202ENST00000448310 EZH2Q15910 746 aaKnown RBP40.36■■■■■ 4.05
CBX4-202ENST00000448310 THRAP3Q9Y2W1 955 aaKnown RBP40.36■■■■■ 4.05
CBX4-202ENST00000448310 AATKQ6ZMQ8 1374 aa40.35■■■■■ 4.05
CBX4-202ENST00000448310 CRB1P82279 1406 aa40.35■■■■■ 4.05
CBX4-202ENST00000448310 ZNF692Q9BU19 519 aaPredicted RBP40.34■■■■■ 4.05
CBX4-202ENST00000448310 LRP5O75197 1615 aa40.34■■■■■ 4.05
CBX4-202ENST00000448310 RGPD5Q99666 1765 aa40.31■■■■■ 4.04
CBX4-202ENST00000448310 CARD11Q9BXL7 1154 aa40.31■■■■■ 4.04
CBX4-202ENST00000448310 CPSF1Q10570 1443 aaKnown RBP40.31■■■■■ 4.04
CBX4-202ENST00000448310 SOX12O15370 315 aa40.3■■■■■ 4.04
CBX4-202ENST00000448310 APBA3O96018 575 aa40.3■■■■■ 4.04
CBX4-202ENST00000448310 MON2Q7Z3U7 1717 aa40.3■■■■■ 4.04
CBX4-202ENST00000448310 CAMKK2Q96RR4 588 aa40.29■■■■■ 4.04
CBX4-202ENST00000448310 KTN1Q86UP2 1357 aaKnown RBP40.28■■■■■ 4.04
CBX4-202ENST00000448310 AXIN2Q9Y2T1 843 aa40.28■■■■■ 4.04
CBX4-202ENST00000448310 SBNO2Q9Y2G9 1366 aa40.27■■■■■ 4.04
CBX4-202ENST00000448310 TTC21AQ8NDW8 1320 aa40.27■■■■■ 4.04
CBX4-202ENST00000448310 R3HDM1Q15032 1099 aaKnown RBP40.27■■■■■ 4.04
CBX4-202ENST00000448310 TONSLQ96HA7 1378 aa40.26■■■■■ 4.04
CBX4-202ENST00000448310 TOM1L2Q6ZVM7 507 aa40.25■■■■■ 4.03
CBX4-202ENST00000448310 LRRC37A3O60309 1634 aa40.24■■■■■ 4.03
CBX4-202ENST00000448310 WNK3Q9BYP7 1800 aa40.24■■■■■ 4.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms